Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS20205

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,532,486	+				+0.1
4,532,571	+		HER17_RS20195	0.17	-0.9
4,532,847	+		HER17_RS20195	0.77	-0.3
4,532,875	+		HER17_RS20195	0.84	-1.2
4,534,826	+				+0.1
4,534,841	+				+0.3
4,534,841	+				+0.5
4,534,846	-				-0.6
4,534,846	-				-0.5
4,534,855	+				+0.2
4,534,855	+				+0.2
4,534,855	+				-0.6
4,534,855	+				+0.3
4,534,855	+				+0.6
4,534,855	+				-0.1
4,534,855	+				-0.1
4,534,855	+				-0.2
4,534,855	+				-0.2
4,534,855	+				-1.1
4,534,855	+				-0.2
4,534,855	+				-0.5
4,534,856	-				-0.0
4,534,856	-				+0.2
4,534,856	-				+0.3
4,534,856	-				+0.6
4,534,856	-				+0.3
4,534,856	-				+0.5
4,534,856	-				+0.3
4,534,856	-				+0.1
4,534,857	+				+0.5
4,534,857	+				+0.8
4,534,857	+				-0.6
4,534,858	-				-0.1
4,534,858	-				-1.0
4,534,858	-				+0.0
4,534,858	-				-0.2
4,534,864	+				+0.1
4,534,864	+				-1.1
4,534,865	-				+0.1
4,534,865	-				+0.0
4,534,868	+				-0.1
4,534,869	-				+0.6
4,534,874	+				+0.4
4,534,926	-				+0.6
4,534,930	-				+0.7
4,534,960	+				+0.0
4,534,976	+				+1.1
4,534,976	+				-0.2
4,534,977	-				-0.0
4,534,998	+				-0.4
4,535,023	+		HER17_RS20210	0.11	-0.2
4,535,024	-		HER17_RS20210	0.11	+0.3
4,535,136	+		HER17_RS20210	0.38	-0.0
4,535,300	-		HER17_RS20210	0.76	+0.4
4,535,403	+				+0.8
4,535,404	-				-0.7
4,535,427	-				+0.2
4,535,431	-				+0.1
4,535,431	-				-0.8
4,535,431	-				+0.0
4,535,459	+				-0.1
4,535,459	+				+0.1
4,535,459	+				-0.1
4,535,460	-				-0.6
4,535,463	-				+0.5
4,535,463	-				+0.2
4,535,471	-				-0.9
4,535,473	+				+0.9
4,535,474	-				-0.5
4,535,525	-				-1.4
4,535,525	-				-0.5
4,535,556	+				+0.2
4,535,577	+				+0.2
4,535,578	-				+0.2
4,535,578	-				+0.2
4,535,585	-				-0.3
4,535,620	+				+0.7
4,535,621	-				+0.3
4,535,631	+				+0.1
4,535,642	+				+0.3
4,535,650	-				+0.1
4,535,716	-				-0.1
4,535,722	+				-0.8
4,535,725	+				+0.5
4,535,725	+				-1.2
4,535,725	+				+0.1
4,535,780	-				-0.3