Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS19565

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,394,822	-				-1.4
4,394,852	-				-0.3
4,394,913	+				+0.3
4,394,944	-				+0.3
4,394,969	+				-2.1
4,394,969	+				+0.7
4,394,970	-				+0.0
4,395,013	+				-0.4
4,395,029	-				-0.2
4,395,029	-				+0.3
4,395,029	-				-0.4
4,395,092	+				+0.5
4,395,093	-				+0.5
4,395,093	-				+2.0
4,395,093	-				+0.3
4,395,093	-				+0.4
4,395,093	-				+0.7
4,395,301	+				+0.5
4,395,347	+				+0.1
4,395,347	+				+0.1
4,395,347	+				+0.6
4,395,347	+				+0.1
4,395,352	+				+0.4
4,395,372	-				-0.4
4,395,415	+				+1.0
4,395,415	+				+0.1
4,395,415	+				-1.2
4,395,416	-				-0.2
4,395,416	-				-0.4
4,395,416	-				-0.3
4,395,416	-				+0.2
4,395,416	-				-0.2
4,395,418	+				+0.3
4,395,419	-				-0.1
4,395,543	+				-0.3
4,395,544	-				+0.2
4,395,554	+				+0.8
4,395,587	-				-0.5
4,395,663	-				+0.5
4,395,774	+		HER17_RS19565	0.24	+0.1
4,395,880	+		HER17_RS19565	0.74	-0.1
4,395,880	+		HER17_RS19565	0.74	+0.1
4,395,881	-		HER17_RS19565	0.74	+0.9
4,395,881	-		HER17_RS19565	0.74	+0.2
4,395,881	-		HER17_RS19565	0.74	+0.4
4,395,938	-				+0.9
4,395,938	-				+0.6
4,396,015	+				+0.6
4,396,015	+				-0.5
4,396,046	+				+0.8
4,396,087	-				+0.5
4,396,242	-				-1.9
4,396,296	-				+0.2
4,396,316	-				+0.1
4,396,324	+				+0.1
4,396,324	+				-0.3
4,396,326	+				-0.1
4,396,327	-				-0.3
4,396,330	+				-0.3
4,396,336	+				-0.2
4,396,336	+				+0.6
4,396,337	-				-0.4
4,396,354	+				-0.9
4,396,354	+				-0.0
4,396,355	-				-0.4
4,396,428	+		HER17_RS19570	0.24	+0.3
4,396,428	+		HER17_RS19570	0.24	-0.7
4,396,428	+		HER17_RS19570	0.24	-1.0
4,396,438	+		HER17_RS19570	0.26	+0.1
4,396,450	+		HER17_RS19570	0.28	+0.2
4,396,455	-		HER17_RS19570	0.29	-0.6
4,396,522	+		HER17_RS19570	0.42	-1.5
4,396,522	+		HER17_RS19570	0.42	+1.0
4,396,786	+				-0.4
4,396,822	+				-0.4
4,396,823	-				-0.1
4,396,872	+				+0.0
4,396,873	-				+1.4
4,396,877	-				+0.2
4,396,934	+				-0.3