Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS19345

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,348,704	+		HER17_RS19340	0.82	-0.3
4,348,704	+		HER17_RS19340	0.82	+0.3
4,348,704	+		HER17_RS19340	0.82	-0.6
4,348,705	-		HER17_RS19340	0.82	-0.9
4,348,705	-		HER17_RS19340	0.82	-0.2
4,348,705	-		HER17_RS19340	0.82	-0.3
4,348,739	+		HER17_RS19340	0.84	+0.4
4,348,739	+		HER17_RS19340	0.84	-0.4
4,348,740	-		HER17_RS19340	0.84	-1.0
4,348,765	-		HER17_RS19340	0.85	+0.1
4,348,765	-		HER17_RS19340	0.85	+1.0
4,348,765	-		HER17_RS19340	0.85	-0.1
4,348,811	+		HER17_RS19340	0.87	-0.6
4,348,812	-		HER17_RS19340	0.87	-0.3
4,348,812	-		HER17_RS19340	0.87	+0.2
4,348,820	+		HER17_RS19340	0.88	-0.5
4,348,822	+		HER17_RS19340	0.88	+0.0
4,348,822	+		HER17_RS19340	0.88	+0.4
4,348,822	+		HER17_RS19340	0.88	-0.2
4,348,822	+		HER17_RS19340	0.88	+0.3
4,348,822	+		HER17_RS19340	0.88	+0.2
4,348,823	-		HER17_RS19340	0.88	-0.4
4,348,823	-		HER17_RS19340	0.88	+1.2
4,348,865	-		HER17_RS19340	0.90	+0.2
4,348,890	+				-0.3
4,348,890	+				-0.3
4,348,891	-				-0.6
4,348,891	-				+0.6
4,348,904	+				-0.0
4,348,939	+				-0.8
4,348,940	-				+0.1
4,348,940	-				+0.4
4,348,971	+				-0.3
4,348,972	-				-0.9
4,348,975	+				-0.2
4,348,975	+				+0.1
4,348,975	+				+0.6
4,348,975	+				-0.2
4,348,976	-				+0.0
4,349,005	+				+0.1
4,349,005	+				+0.1
4,349,005	+				+0.7
4,349,006	-				+0.4
4,349,007	+				+0.2
4,349,007	+				+0.2
4,349,008	-				-0.1
4,349,008	-				+1.2
4,349,008	-				-0.7
4,349,026	+				-0.9
4,349,037	-				+0.3
4,349,068	+				+0.1
4,349,068	+				+0.2
4,349,068	+				+0.3
4,349,069	-				+0.1
4,349,072	-				+0.3
4,349,072	-				+0.4
4,349,117	+				-0.6
4,349,117	+				-0.5
4,349,118	-				-1.3
4,349,118	-				+0.3
4,349,119	+				+0.4
4,349,156	+				-0.5
4,349,156	+				-0.4
4,349,165	-				-0.1
4,349,215	+				+0.1
4,349,216	-				-0.1
4,349,216	-				-0.1
4,349,221	+				+0.9
4,349,222	-				-0.4
4,349,222	-				+0.0
4,349,222	-				-0.3
4,349,230	+				+0.3
4,349,230	+				-0.1
4,349,230	+				-0.1
4,349,230	+				+0.9
4,349,236	+				-0.1
4,349,296	-				+0.1
4,349,302	+				-0.1
4,349,302	+				+0.7
4,349,303	-				+0.5
4,349,303	-				-1.3
4,349,303	-				-0.1
4,349,303	-				+0.1
4,349,307	+				+0.1
4,349,307	+				+0.6
4,349,307	+				-0.6
4,349,308	-				+0.0
4,349,308	-				+0.9
4,349,314	+				+0.2
4,349,316	+				-0.1
4,349,317	-				-0.3
4,349,330	-				+0.4
4,349,353	+				-0.4
4,349,353	+				+0.2
4,349,354	-				-0.3
4,349,354	-				+0.3
4,349,403	+				-0.1
4,349,455	-				+0.7
4,349,508	+				+0.2
4,349,508	+				-0.0
4,349,508	+				-0.2
4,349,509	-				-1.2
4,349,634	+				+0.3
4,349,635	-				+0.2
4,349,635	-				+0.6
4,349,635	-				-0.1
4,349,662	+				-0.3
4,349,663	-				+0.7
4,349,667	-				-0.2
4,349,667	-				-0.5
4,349,670	+				-0.4
4,349,670	+				-0.3
4,349,670	+				+0.2
4,349,670	+				-1.0
4,349,671	-				+0.5
4,349,671	-				-0.8
4,349,674	+				-0.6
4,349,674	+				-0.2
4,349,675	-				+0.6
4,349,675	-				+0.9
4,349,685	+				-0.3
4,349,685	+				-0.2
4,349,685	+				-0.2
4,349,728	+		HER17_RS19345	0.11	-2.1
4,349,728	+		HER17_RS19345	0.11	+0.3
4,349,728	+		HER17_RS19345	0.11	-0.4
4,349,728	+		HER17_RS19345	0.11	-1.6
4,349,732	-		HER17_RS19345	0.12	-0.0
4,349,732	-		HER17_RS19345	0.12	+0.7
4,349,846	+		HER17_RS19345	0.46	+0.2
4,349,846	+		HER17_RS19345	0.46	+0.7
4,349,847	-		HER17_RS19345	0.47	-0.3
4,349,847	-		HER17_RS19345	0.47	-2.0
4,349,968	-		HER17_RS19345	0.83	-0.2
4,349,968	-		HER17_RS19345	0.83	+0.3
4,349,975	+		HER17_RS19345	0.85	-0.0
4,349,975	+		HER17_RS19345	0.85	+0.1
4,349,975	+		HER17_RS19345	0.85	-0.3
4,349,976	-		HER17_RS19345	0.85	-0.4
4,349,976	-		HER17_RS19345	0.85	-1.1
4,349,976	-		HER17_RS19345	0.85	-0.5
4,349,976	-		HER17_RS19345	0.85	-0.5
4,349,976	-		HER17_RS19345	0.85	-0.2
4,349,979	+		HER17_RS19345	0.86	+0.1
4,349,979	+		HER17_RS19345	0.86	+0.6
4,349,980	-		HER17_RS19345	0.86	+1.1
4,349,980	-		HER17_RS19345	0.86	+0.8
4,350,017	-				+1.7
4,350,032	+				-1.1
4,350,032	+				+1.0
4,350,032	+				-0.2
4,350,033	-				-0.3
4,350,033	-				+0.6
4,350,033	-				+0.5
4,350,033	-				-0.3
4,350,039	+				+1.5
4,350,039	+				+0.1
4,350,039	+				+0.3
4,350,040	-				-0.7
4,350,040	-				-0.2
4,350,040	-				-0.1
4,350,047	+				-0.2
4,350,047	+				-0.1
4,350,048	-				-0.4
4,350,048	-				-1.7
4,350,048	-				+0.3
4,350,048	-				-0.0
4,350,048	-				-0.1
4,350,048	-				+0.1
4,350,048	-				-0.3
4,350,048	-				-0.6
4,350,049	+				-0.3
4,350,050	-				-0.4
4,350,050	-				+1.5
4,350,050	-				+0.2
4,350,050	-				+0.1
4,350,058	+				-0.5
4,350,059	-				-0.5
4,350,059	-				-0.2
4,350,059	-				+0.1
4,350,060	+				-0.9
4,350,060	+				-0.4
4,350,068	+				+0.2
4,350,069	-				+0.1
4,350,105	+				-0.8
4,350,175	+				-0.0
4,350,203	-				+1.1
4,350,240	-				-0.6
4,350,314	+				-0.0
4,350,314	+				-0.9
4,350,315	-				-0.2
4,350,315	-				+0.3
4,350,315	-				-0.2
4,350,319	+				+0.6
4,350,319	+				-0.4
4,350,320	-				+1.3
4,350,334	+				-0.4
4,350,373	-				-0.2
4,350,378	+				+1.0
4,350,378	+				-0.5
4,350,378	+				-0.3
4,350,378	+				+0.4
4,350,379	-				+0.3
4,350,514	+				+0.4
4,350,547	-				+0.1
4,350,547	-				+0.2
4,350,562	-				+0.4
4,350,572	+				-0.1
4,350,589	+				+1.2
4,350,605	-				-0.0
4,350,682	+				+0.3
4,350,682	+				+0.1
4,350,682	+				-0.6
4,350,682	+				-0.5
4,350,683	-				-1.0
4,350,683	-				-0.2
4,350,683	-				-0.3
4,350,686	+				+1.0
4,350,686	+				-0.6
4,350,687	-				-3.3
4,350,687	-				+1.0
4,350,687	-				+0.1
4,350,696	-				-1.3
4,350,983	-		HER17_RS19350	0.34	-0.1
4,351,003	+		HER17_RS19350	0.36	+0.7