Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS19285

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,335,168	-		HER17_RS19280	0.81	+0.4
4,335,212	+		HER17_RS19280	0.83	-0.4
4,335,212	+		HER17_RS19280	0.83	-1.1
4,335,212	+		HER17_RS19280	0.83	-0.5
4,335,307	+		HER17_RS19280	0.88	-0.0
4,335,359	+				+0.5
4,335,379	+				+0.2
4,335,379	+				-0.9
4,335,380	-				+1.3
4,335,380	-				+0.3
4,335,380	-				-0.1
4,335,439	+				-0.2
4,335,440	-				+0.9
4,335,540	+				-0.1
4,335,540	+				-0.9
4,335,540	+				-1.0
4,335,541	-				-1.1
4,335,541	-				+0.6
4,335,547	+				+0.4
4,335,563	+				+0.9
4,335,564	-				-0.7
4,335,581	+				+0.2
4,335,581	+				+0.2
4,335,581	+				+0.1
4,335,582	-				+0.1
4,335,628	+				-0.1
4,335,629	-				-0.1
4,335,629	-				-0.3
4,335,639	+				-1.0
4,335,640	-				+0.3
4,335,640	-				+0.3
4,335,642	-				+0.9
4,335,664	+				+0.2
4,335,664	+				+0.5
4,335,664	+				+0.2
4,335,665	-				-0.1
4,335,673	+				-0.4
4,335,674	-				+0.0
4,335,676	-				+0.1
4,335,781	+				-0.4
4,335,865	+				-0.1
4,335,909	+				-0.4
4,335,972	+				-0.6
4,336,058	+				+0.4
4,336,167	+				+0.6
4,336,171	-				-0.6
4,336,193	-		HER17_RS19285	0.12	-1.1
4,336,221	-		HER17_RS19285	0.16	+0.2
4,336,351	+		HER17_RS19285	0.35	+0.6
4,336,352	-		HER17_RS19285	0.35	+0.2
4,336,372	+		HER17_RS19285	0.38	+0.4
4,336,394	+		HER17_RS19285	0.42	-0.0
4,336,394	+		HER17_RS19285	0.42	+0.1
4,336,394	+		HER17_RS19285	0.42	-0.2
4,336,395	-		HER17_RS19285	0.42	-0.3
4,336,406	+		HER17_RS19285	0.43	+0.5
4,336,407	-		HER17_RS19285	0.44	+0.7
4,336,443	-		HER17_RS19285	0.49	-0.2
4,336,556	-		HER17_RS19285	0.66	-0.1
4,336,573	+		HER17_RS19285	0.68	-0.4
4,336,573	+		HER17_RS19285	0.68	-1.1
4,336,573	+		HER17_RS19285	0.68	-0.2
4,336,574	-		HER17_RS19285	0.69	+0.7
4,336,980	+		HER17_RS19290	0.14	+1.5
4,336,980	+		HER17_RS19290	0.14	+0.5
4,336,980	+		HER17_RS19290	0.14	-0.1
4,336,980	+		HER17_RS19290	0.14	-1.0
4,337,357	+		HER17_RS19290	0.39	+0.2
4,337,357	+		HER17_RS19290	0.39	+0.9
4,337,357	+		HER17_RS19290	0.39	-0.4
4,337,358	-		HER17_RS19290	0.39	+1.9
4,337,358	-		HER17_RS19290	0.39	-0.2
4,337,358	-		HER17_RS19290	0.39	+0.1
4,337,358	-		HER17_RS19290	0.39	-0.5
4,337,380	+		HER17_RS19290	0.41	+0.5
4,337,424	+		HER17_RS19290	0.44	-0.1
4,337,424	+		HER17_RS19290	0.44	-0.7
4,337,425	-		HER17_RS19290	0.44	+0.1
4,337,425	-		HER17_RS19290	0.44	-0.1
4,337,425	-		HER17_RS19290	0.44	+2.0
4,337,425	-		HER17_RS19290	0.44	+0.5
4,337,425	-		HER17_RS19290	0.44	-0.0
4,337,425	-		HER17_RS19290	0.44	+0.4
4,337,512	+		HER17_RS19290	0.50	+0.1
4,337,561	+		HER17_RS19290	0.53	-0.5
4,337,562	-		HER17_RS19290	0.53	+0.1
4,337,562	-		HER17_RS19290	0.53	-0.8
4,337,693	+		HER17_RS19290	0.62	-0.2
4,337,693	+		HER17_RS19290	0.62	-1.0