Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS18935

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,246,601	+		HER17_RS18925	0.84	+0.8
4,246,601	+		HER17_RS18925	0.84	+0.7
4,246,602	-		HER17_RS18925	0.84	-0.1
4,246,602	-		HER17_RS18925	0.84	-0.3
4,246,602	-		HER17_RS18925	0.84	-1.0
4,246,618	+				-0.1
4,246,676	-				-0.4
4,246,695	+				+0.3
4,246,695	+				-0.4
4,246,695	+				+0.7
4,246,696	-				+0.3
4,246,696	-				+0.5
4,246,738	-				+0.8
4,246,762	-				-0.9
4,246,839	+		HER17_RS18930	0.13	+0.0
4,246,839	+		HER17_RS18930	0.13	-0.2
4,246,839	+		HER17_RS18930	0.13	-0.1
4,246,839	+		HER17_RS18930	0.13	-0.1
4,246,840	-		HER17_RS18930	0.13	+0.7
4,246,840	-		HER17_RS18930	0.13	-0.8
4,246,840	-		HER17_RS18930	0.13	+0.5
4,246,947	+		HER17_RS18930	0.27	-0.3
4,246,947	+		HER17_RS18930	0.27	-0.5
4,246,948	-		HER17_RS18930	0.27	+0.6
4,246,948	-		HER17_RS18930	0.27	-1.5
4,246,991	+		HER17_RS18930	0.32	+0.7
4,247,047	-		HER17_RS18930	0.40	+0.2
4,247,052	+		HER17_RS18930	0.40	-0.1
4,247,052	+		HER17_RS18930	0.40	+0.2
4,247,052	+		HER17_RS18930	0.40	-0.8
4,247,052	+		HER17_RS18930	0.40	-0.2
4,247,052	+		HER17_RS18930	0.40	+0.4
4,247,052	+		HER17_RS18930	0.40	-0.5
4,247,052	+		HER17_RS18930	0.40	+0.7
4,247,052	+		HER17_RS18930	0.40	-0.1
4,247,053	-		HER17_RS18930	0.40	+0.8
4,247,053	-		HER17_RS18930	0.40	+0.1
4,247,053	-		HER17_RS18930	0.40	+0.5
4,247,053	-		HER17_RS18930	0.40	+0.8
4,247,053	-		HER17_RS18930	0.40	-0.1
4,247,053	-		HER17_RS18930	0.40	+0.3
4,247,053	-		HER17_RS18930	0.40	-0.2
4,247,053	-		HER17_RS18930	0.40	+0.2
4,247,057	+		HER17_RS18930	0.41	+0.1
4,247,058	-		HER17_RS18930	0.41	+0.6
4,247,240	+		HER17_RS18930	0.64	+0.3
4,247,266	-		HER17_RS18930	0.67	-0.2
4,247,281	+		HER17_RS18930	0.69	-0.1
4,247,281	+		HER17_RS18930	0.69	+1.3
4,247,281	+		HER17_RS18930	0.69	+0.1
4,247,281	+		HER17_RS18930	0.69	+0.8
4,247,497	+				+0.1
4,247,509	+				-1.6
4,247,509	+				-0.0
4,247,509	+				-0.9
4,247,510	-				+0.3
4,247,510	-				+0.4
4,247,510	-				+0.7
4,247,653	+		HER17_RS18935	0.16	+0.7
4,247,831	+		HER17_RS18935	0.48	-0.2
4,247,832	-		HER17_RS18935	0.48	+1.0
4,247,873	-		HER17_RS18935	0.55	-0.2
4,247,873	-		HER17_RS18935	0.55	-0.3
4,247,891	-		HER17_RS18935	0.58	-0.3
4,247,903	+		HER17_RS18935	0.60	-0.1
4,247,903	+		HER17_RS18935	0.60	+0.9
4,247,903	+		HER17_RS18935	0.60	-0.7
4,247,985	+		HER17_RS18935	0.75	-0.1
4,247,986	-		HER17_RS18935	0.75	+0.4
4,247,986	-		HER17_RS18935	0.75	+0.5
4,248,001	+		HER17_RS18935	0.77	+0.1
4,248,002	-		HER17_RS18935	0.78	+0.3
4,248,023	+		HER17_RS18935	0.81	-0.3
4,248,023	+		HER17_RS18935	0.81	+0.3
4,248,024	-		HER17_RS18935	0.81	-0.1
4,248,024	-		HER17_RS18935	0.81	+1.7
4,248,113	+				+0.1
4,248,253	+		HER17_RS18940	0.28	-0.2
4,248,280	+		HER17_RS18940	0.37	+0.6
4,248,280	+		HER17_RS18940	0.37	+0.8
4,248,300	-		HER17_RS18940	0.44	-0.5
4,248,367	+		HER17_RS18940	0.67	-1.0
4,248,418	+		HER17_RS18940	0.85	+0.8
4,248,419	-		HER17_RS18940	0.85	-0.3
4,248,448	+				+1.6
4,248,449	-				-2.2
4,248,452	-				-0.8
4,248,452	-				+0.4
4,248,598	+		HER17_RS18945	0.64	-0.2
4,248,599	-		HER17_RS18945	0.64	-0.1
4,248,744	+				-0.7
4,248,753	-				+0.0
4,248,753	-				-0.2
4,248,811	-		HER17_RS18950	0.41	-0.2
4,248,889	+				+0.4
4,248,889	+				-0.2
4,248,890	-				+0.0
4,248,940	+				+0.3
4,248,941	-				-0.1
4,248,941	-				+0.6
4,248,975	-				+0.5
4,248,975	-				+0.4
4,249,006	+				-0.2
4,249,006	+				-0.1
4,249,006	+				-0.5
4,249,011	-				+1.1
4,249,011	-				-0.8
4,249,039	-				+0.1
4,249,040	+				+0.6
4,249,041	-				+0.8