Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS17925

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,040,319	+		HER17_RS17915	0.43	+0.1
4,040,325	+		HER17_RS17915	0.43	+0.4
4,040,325	+		HER17_RS17915	0.43	-0.7
4,040,339	-		HER17_RS17915	0.45	-0.1
4,040,490	-		HER17_RS17915	0.61	+1.2
4,040,588	+		HER17_RS17915	0.72	+0.1
4,040,588	+		HER17_RS17915	0.72	-0.3
4,040,588	+		HER17_RS17915	0.72	+0.0
4,040,589	-		HER17_RS17915	0.72	-0.5
4,040,589	-		HER17_RS17915	0.72	+0.1
4,040,589	-		HER17_RS17915	0.72	+0.1
4,040,589	-		HER17_RS17915	0.72	-1.1
4,040,589	-		HER17_RS17915	0.72	-0.6
4,040,730	-		HER17_RS17915	0.87	-0.0
4,040,766	-				-0.6
4,040,792	+				-0.4
4,040,848	-				-0.0
4,040,858	+				+0.1
4,040,858	+				+0.2
4,040,859	-				-0.9
4,040,859	-				-0.2
4,040,859	-				-0.1
4,040,860	+				+0.5
4,040,861	-				-0.0
4,040,923	+				-1.6
4,040,923	+				+0.2
4,040,924	-				-0.9
4,040,924	-				-0.3
4,041,040	-		HER17_RS17920	0.31	-0.9
4,041,040	-		HER17_RS17920	0.31	+0.5
4,041,048	+		HER17_RS17920	0.34	-0.5
4,041,051	+		HER17_RS17920	0.34	+0.1
4,041,052	-		HER17_RS17920	0.35	+0.3
4,041,052	-		HER17_RS17920	0.35	-0.3
4,041,155	+		HER17_RS17920	0.62	+0.0
4,041,155	+		HER17_RS17920	0.62	-0.2
4,041,155	+		HER17_RS17920	0.62	+0.1
4,041,155	+		HER17_RS17920	0.62	+0.2
4,041,155	+		HER17_RS17920	0.62	-1.8
4,041,156	-		HER17_RS17920	0.62	+1.1
4,041,158	+		HER17_RS17920	0.63	-0.3
4,041,259	-				+0.3
4,041,259	-				-1.0
4,041,261	+				+0.1
4,041,262	-				-0.1
4,041,264	+				+0.2
4,041,265	-				+0.2
4,041,342	+				-1.2
4,041,343	-		HER17_RS17925	0.10	+0.1
4,041,421	+		HER17_RS17925	0.39	-0.1
4,041,443	-		HER17_RS17925	0.48	+0.5
4,041,452	-		HER17_RS17925	0.51	+0.3
4,041,465	+		HER17_RS17925	0.56	-1.0
4,041,465	+		HER17_RS17925	0.56	-0.3
4,041,477	+		HER17_RS17925	0.60	+0.5
4,041,477	+		HER17_RS17925	0.60	-0.4
4,041,478	-		HER17_RS17925	0.61	-1.1
4,041,489	-		HER17_RS17925	0.65	-1.3
4,041,489	-		HER17_RS17925	0.65	+0.7
4,041,534	+		HER17_RS17925	0.82	-1.7
4,041,534	+		HER17_RS17925	0.82	-0.1
4,041,534	+		HER17_RS17925	0.82	-1.6
4,041,535	-		HER17_RS17925	0.82	+0.0
4,041,567	+				-0.5
4,041,618	-				-0.3
4,041,623	-				+1.1
4,041,623	-				-0.3
4,041,623	-				+0.6
4,041,623	-				+0.5
4,041,650	+				+0.1
4,041,650	+				+0.4
4,041,651	-				+0.2
4,041,654	-				+0.4
4,041,669	+				-0.1
4,041,669	+				+0.6
4,041,722	-				-0.4
4,041,722	-				-0.4
4,041,771	+				+0.0
4,041,772	-				+0.0
4,041,812	+				-0.9
4,041,812	+				-0.8
4,041,812	+				+0.9
4,041,815	+				-2.6
4,041,817	+				-0.6
4,041,817	+				-1.0
4,041,817	+				+0.2
4,041,817	+				-0.1