Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS17410

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,925,626	+		HER17_RS17405	0.48	+0.6
3,925,762	+		HER17_RS17405	0.59	+0.3
3,925,763	-		HER17_RS17405	0.59	-0.1
3,925,764	+		HER17_RS17405	0.59	-0.8
3,925,764	+		HER17_RS17405	0.59	-0.3
3,925,764	+		HER17_RS17405	0.59	+0.8
3,925,765	-		HER17_RS17405	0.59	+1.0
3,925,765	-		HER17_RS17405	0.59	+0.8
3,925,765	-		HER17_RS17405	0.59	-1.5
3,925,837	+		HER17_RS17405	0.65	+0.6
3,925,837	+		HER17_RS17405	0.65	+0.0
3,925,838	-		HER17_RS17405	0.65	+0.3
3,925,838	-		HER17_RS17405	0.65	-0.2
3,925,838	-		HER17_RS17405	0.65	+0.2
3,925,838	-		HER17_RS17405	0.65	+0.1
3,925,898	+		HER17_RS17405	0.70	+0.6
3,926,014	+		HER17_RS17405	0.80	+0.0
3,926,116	+		HER17_RS17405	0.88	+0.5
3,926,116	+		HER17_RS17405	0.88	-0.5
3,926,116	+		HER17_RS17405	0.88	+0.5
3,926,116	+		HER17_RS17405	0.88	+0.3
3,926,117	-		HER17_RS17405	0.88	-0.0
3,926,146	+				-1.3
3,926,147	-				+0.2
3,926,147	-				+1.0
3,926,147	-				+0.9
3,926,172	+				-0.1
3,926,172	+				-1.1
3,926,173	-				-0.3
3,926,173	-				-0.4
3,926,230	+				+0.7
3,926,230	+				-1.5
3,926,230	+				-0.4
3,926,231	-				+0.1
3,926,231	-				+0.1
3,926,248	+				-0.9
3,926,266	+				-0.1
3,926,266	+				-0.7
3,926,266	+				+0.1
3,926,267	-				-0.8
3,926,267	-				+0.1
3,926,269	+				-0.4
3,926,269	+				-1.1
3,926,269	+				-0.3
3,926,269	+				-0.0
3,926,270	-				+1.0
3,926,270	-				+0.4
3,926,270	-				+0.0
3,926,270	-				-0.0
3,926,270	-				+0.1
3,926,280	+				-0.5
3,926,281	-				+0.6
3,926,281	-				+0.6
3,926,281	-				+0.4
3,926,294	+				-0.9
3,926,294	+				-0.2
3,926,294	+				+0.2
3,926,295	-				-1.1
3,926,297	+				+1.7
3,926,297	+				+1.4
3,926,298	-				+0.1
3,926,343	-				+1.0
3,926,346	-				-0.4
3,926,346	-				+0.8
3,926,346	-				-0.1
3,926,360	+				+0.2
3,926,361	-				+0.3
3,926,365	-				-1.3
3,926,390	-				-0.1
3,926,434	+				-0.1
3,926,435	-				+1.0
3,926,458	+				+0.5
3,926,460	+				+0.2
3,926,460	+				-0.4
3,926,460	+				+0.3
3,926,461	-				+0.5
3,926,498	+				+0.3
3,926,504	+				+0.5
3,926,511	+				-0.3
3,926,512	-				-0.1
3,926,512	-				-0.2
3,926,515	+				-0.2
3,926,515	+				-0.7
3,926,526	+				-0.8
3,926,526	+				+0.1
3,926,526	+				+0.2
3,926,526	+				+0.5
3,927,133	-				-0.0
3,927,138	+				+0.3
3,927,139	-				-0.2
3,927,139	-				+0.3
3,927,139	-				-0.3
3,927,155	+				-0.6
3,927,156	-				-0.1
3,927,156	-				-1.1
3,927,159	-				-0.6
3,927,198	+				-0.2
3,927,198	+				+0.3
3,927,198	+				+0.6
3,927,198	+				+0.4
3,927,199	-				+0.2
3,927,199	-				-2.2
3,927,199	-				+0.7
3,927,199	-				+0.8
3,927,199	-				-0.0
3,927,199	-				+0.2
3,927,199	-				+0.2
3,927,199	-				-0.4
3,927,261	+				-0.0
3,927,261	+				+0.4