Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS16575

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,740,634	+		HER17_RS16565	0.53	+0.5
3,740,655	+		HER17_RS16565	0.62	-1.2
3,740,655	+		HER17_RS16565	0.62	+0.7
3,740,656	-		HER17_RS16565	0.62	+0.6
3,740,720	+		HER17_RS16565	0.89	+0.3
3,742,498	-				-1.1
3,742,498	-				-0.8
3,742,591	-				-0.4
3,742,591	-				+0.7
3,742,595	+				+0.4
3,742,595	+				-0.7
3,742,595	+				+0.2
3,742,596	-				-2.0
3,742,596	-				-0.0
3,742,596	-				+0.5
3,742,596	-				-0.1
3,742,636	+				-0.5
3,742,664	-				-0.1
3,742,685	+				-0.0
3,742,685	+				+0.1
3,742,685	+				-0.3
3,742,685	+				+0.5
3,742,713	+				+0.3
3,742,714	-				-0.9
3,742,861	+				+0.2
3,742,861	+				+0.4
3,742,862	-				+0.3
3,742,862	-				-1.8
3,742,975	+		HER17_RS16580	0.12	+0.3
3,742,975	+		HER17_RS16580	0.12	+1.2
3,742,975	+		HER17_RS16580	0.12	+0.9
3,742,976	-		HER17_RS16580	0.12	+0.2
3,743,002	+		HER17_RS16580	0.13	+1.0
3,743,003	-		HER17_RS16580	0.13	+0.1
3,743,003	-		HER17_RS16580	0.13	-0.8
3,743,020	+		HER17_RS16580	0.14	-0.3
3,743,020	+		HER17_RS16580	0.14	+0.1
3,743,020	+		HER17_RS16580	0.14	+0.4
3,743,020	+		HER17_RS16580	0.14	-0.2
3,743,020	+		HER17_RS16580	0.14	-0.2
3,743,020	+		HER17_RS16580	0.14	-0.2
3,743,021	-		HER17_RS16580	0.14	+0.3
3,743,021	-		HER17_RS16580	0.14	+0.7
3,743,021	-		HER17_RS16580	0.14	-0.1
3,743,021	-		HER17_RS16580	0.14	+0.7
3,743,021	-		HER17_RS16580	0.14	+0.0
3,743,040	+		HER17_RS16580	0.15	+1.1
3,743,040	+		HER17_RS16580	0.15	+0.4
3,743,065	+		HER17_RS16580	0.16	-0.1
3,743,066	-		HER17_RS16580	0.16	+1.0
3,743,066	-		HER17_RS16580	0.16	+0.4
3,743,073	-		HER17_RS16580	0.16	+0.1
3,743,073	-		HER17_RS16580	0.16	-0.2
3,743,085	+		HER17_RS16580	0.17	+0.4
3,743,213	+		HER17_RS16580	0.22	+0.7
3,743,294	+		HER17_RS16580	0.26	+0.1
3,743,294	+		HER17_RS16580	0.26	-0.1
3,743,295	-		HER17_RS16580	0.26	-0.4
3,743,314	+		HER17_RS16580	0.27	+0.0
3,743,314	+		HER17_RS16580	0.27	+0.2
3,743,315	-		HER17_RS16580	0.27	+0.1
3,743,377	+		HER17_RS16580	0.30	-0.0
3,743,377	+		HER17_RS16580	0.30	-0.8
3,743,381	-		HER17_RS16580	0.30	+0.5
3,743,381	-		HER17_RS16580	0.30	+0.1
3,743,430	+		HER17_RS16580	0.32	+1.0
3,743,430	+		HER17_RS16580	0.32	-0.1
3,743,431	-		HER17_RS16580	0.32	+0.1