Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15860

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,563,352	+		HER17_RS15855	0.49	-0.6
3,563,579	-		HER17_RS15855	0.67	+1.5
3,563,579	-		HER17_RS15855	0.67	+0.7
3,563,600	-		HER17_RS15855	0.68	-0.5
3,563,700	+		HER17_RS15855	0.76	-1.9
3,563,700	+		HER17_RS15855	0.76	+0.6
3,563,737	+		HER17_RS15855	0.79	-0.3
3,563,737	+		HER17_RS15855	0.79	-2.2
3,563,739	+		HER17_RS15855	0.79	+1.0
3,563,739	+		HER17_RS15855	0.79	-0.8
3,563,739	+		HER17_RS15855	0.79	-2.7
3,563,739	+		HER17_RS15855	0.79	+0.1
3,563,739	+		HER17_RS15855	0.79	-0.5
3,563,739	+		HER17_RS15855	0.79	-0.5
3,563,740	-		HER17_RS15855	0.79	+0.2
3,563,740	-		HER17_RS15855	0.79	-0.3
3,563,740	-		HER17_RS15855	0.79	-0.7
3,563,740	-		HER17_RS15855	0.79	-0.3
3,563,780	-		HER17_RS15855	0.82	+0.2
3,563,816	+		HER17_RS15855	0.85	-0.8
3,563,893	+				-0.3
3,563,894	-				-0.5
3,563,894	-				-0.6
3,564,020	-				-0.6
3,564,124	+				-0.6
3,564,128	+				-1.4
3,564,128	+				-0.2
3,564,129	-				+0.0
3,564,129	-				-0.3
3,564,214	+				-0.4
3,564,216	+				+1.0
3,564,217	-				+0.6
3,564,224	+				-0.1
3,564,224	+				-0.2
3,564,224	+				-0.7
3,564,225	-				+0.0
3,564,256	+				+0.6
3,564,259	+				+0.5
3,564,259	+				-0.1
3,564,259	+				-0.3
3,564,260	-				+0.0
3,564,260	-				+0.7
3,564,284	+				+0.3
3,564,288	-				-0.6
3,564,288	-				+0.3
3,564,300	+				+0.5
3,564,321	+				-1.4
3,564,322	-				-0.6
3,564,322	-				+0.3
3,564,322	-				+0.5
3,564,329	+				-0.1
3,564,408	-		HER17_RS15860	0.25	-0.1
3,564,408	-		HER17_RS15860	0.25	-0.3
3,564,408	-		HER17_RS15860	0.25	+0.9
3,564,411	+		HER17_RS15860	0.26	+0.3
3,564,411	+		HER17_RS15860	0.26	+0.7
3,564,411	+		HER17_RS15860	0.26	+0.3
3,564,411	+		HER17_RS15860	0.26	+0.3
3,564,412	-		HER17_RS15860	0.27	-0.4
3,564,412	-		HER17_RS15860	0.27	+0.7
3,564,412	-		HER17_RS15860	0.27	+0.2
3,564,412	-		HER17_RS15860	0.27	+0.5
3,564,412	-		HER17_RS15860	0.27	-0.1
3,564,412	-		HER17_RS15860	0.27	-0.2
3,564,412	-		HER17_RS15860	0.27	+0.1
3,564,412	-		HER17_RS15860	0.27	+1.1
3,564,415	+		HER17_RS15860	0.28	-0.8
3,564,415	+		HER17_RS15860	0.28	-0.1
3,564,415	+		HER17_RS15860	0.28	-0.6
3,564,415	+		HER17_RS15860	0.28	+1.2
3,564,415	+		HER17_RS15860	0.28	+0.2
3,564,415	+		HER17_RS15860	0.28	-1.5
3,564,415	+		HER17_RS15860	0.28	-0.2
3,564,415	+		HER17_RS15860	0.28	-0.5
3,564,416	-		HER17_RS15860	0.28	-0.2
3,564,416	-		HER17_RS15860	0.28	-0.6
3,564,416	-		HER17_RS15860	0.28	+0.2
3,564,416	-		HER17_RS15860	0.28	-0.6
3,564,416	-		HER17_RS15860	0.28	+0.4
3,564,421	+		HER17_RS15860	0.30	+0.3
3,564,464	+		HER17_RS15860	0.43	+0.0
3,564,465	-		HER17_RS15860	0.43	+0.2
3,564,508	-		HER17_RS15860	0.57	-0.9
3,564,528	+		HER17_RS15860	0.63	+1.8
3,564,567	-		HER17_RS15860	0.76	+0.4
3,564,567	-		HER17_RS15860	0.76	+0.4
3,564,567	-		HER17_RS15860	0.76	+0.0
3,564,586	+		HER17_RS15860	0.82	-0.6
3,564,586	+		HER17_RS15860	0.82	+1.2
3,564,587	-		HER17_RS15860	0.82	+0.0
3,564,587	-		HER17_RS15860	0.82	-0.2
3,564,675	+				+0.3
3,564,710	+				-0.5
3,564,711	-				-0.3
3,564,730	+				+0.1
3,564,730	+				-0.6
3,564,730	+				+0.1
3,564,731	-				+0.3
3,564,731	-				+0.5
3,564,736	+				-2.0
3,564,804	+				-0.6
3,564,804	+				-0.5
3,564,804	+				-0.3
3,564,804	+				-0.0
3,564,805	-				-0.2
3,564,805	-				+0.9
3,564,805	-				+0.4
3,564,805	-				+0.3
3,564,806	+				-0.6
3,564,829	+				+0.1
3,564,830	-				-0.2
3,564,883	+				-0.3
3,564,883	+				-0.1
3,564,884	-				-0.1
3,564,884	-				+0.6
3,564,921	+				+0.5
3,564,921	+				-0.1
3,564,921	+				+0.5
3,564,921	+				+0.1
3,564,921	+				+1.3
3,564,922	-				-0.3
3,564,922	-				+0.3
3,564,926	+				+0.5
3,564,926	+				+0.6
3,564,935	+				-0.8
3,564,935	+				+0.2
3,564,935	+				-0.2
3,564,936	-				-0.0
3,564,936	-				+0.3
3,564,956	-				+0.2
3,564,974	-				-0.6
3,564,974	-				-0.2
3,565,112	+		HER17_RS15865	0.23	+0.1
3,565,113	-		HER17_RS15865	0.23	-0.4
3,565,115	+		HER17_RS15865	0.24	-0.4
3,565,115	+		HER17_RS15865	0.24	+0.0
3,565,116	-		HER17_RS15865	0.24	-0.6
3,565,116	-		HER17_RS15865	0.24	-0.0
3,565,254	+		HER17_RS15865	0.48	-0.2
3,565,254	+		HER17_RS15865	0.48	-0.6
3,565,254	+		HER17_RS15865	0.48	-0.9
3,565,394	+		HER17_RS15865	0.72	-0.1
3,565,410	+		HER17_RS15865	0.75	-0.5
3,565,411	-		HER17_RS15865	0.75	+0.4
3,565,422	+		HER17_RS15865	0.77	-0.1
3,565,422	+		HER17_RS15865	0.77	+0.5
3,565,422	+		HER17_RS15865	0.77	-0.5
3,565,422	+		HER17_RS15865	0.77	+0.2
3,565,423	-		HER17_RS15865	0.77	+0.2
3,565,463	+		HER17_RS15865	0.84	-1.0
3,565,525	+				-1.9
3,565,525	+				-0.0
3,565,525	+				-0.1
3,565,526	-				+0.3
3,565,529	+				-0.0
3,565,529	+				+0.2
3,565,529	+				+0.3
3,565,530	-				-0.1
3,565,530	-				-1.1
3,565,621	+				-0.4
3,565,622	-				+0.5