Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15495

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,474,215	+		HER17_RS15490	0.63	-0.9
3,474,242	+		HER17_RS15490	0.64	-0.7
3,474,242	+		HER17_RS15490	0.64	-0.2
3,474,300	+		HER17_RS15490	0.67	+0.8
3,474,315	+		HER17_RS15490	0.67	+0.1
3,474,346	+		HER17_RS15490	0.68	-0.1
3,474,442	-		HER17_RS15490	0.72	+0.4
3,474,484	+		HER17_RS15490	0.74	+0.2
3,474,484	+		HER17_RS15490	0.74	-0.7
3,474,523	-		HER17_RS15490	0.76	-0.1
3,474,523	-		HER17_RS15490	0.76	-0.5
3,474,532	+		HER17_RS15490	0.76	-0.8
3,474,533	-		HER17_RS15490	0.76	-0.2
3,474,593	-		HER17_RS15490	0.79	+0.6
3,474,616	+		HER17_RS15490	0.80	-1.9
3,474,616	+		HER17_RS15490	0.80	+0.4
3,474,860	-		HER17_RS15490	0.90	+1.6
3,475,257	+		HER17_RS15495	0.20	+0.2
3,475,376	-		HER17_RS15495	0.37	-0.4
3,475,376	-		HER17_RS15495	0.37	+0.1
3,475,618	+		HER17_RS15495	0.70	+0.0
3,475,618	+		HER17_RS15495	0.70	+0.3
3,475,619	-		HER17_RS15495	0.70	-0.2
3,475,619	-		HER17_RS15495	0.70	-0.0
3,475,619	-		HER17_RS15495	0.70	+0.1
3,475,619	-		HER17_RS15495	0.70	+0.9
3,475,619	-		HER17_RS15495	0.70	-0.1
3,475,755	+		HER17_RS15495	0.88	+0.1
3,475,756	-		HER17_RS15495	0.89	-0.8
3,475,758	+		HER17_RS15495	0.89	+0.2
3,475,759	-		HER17_RS15495	0.89	+0.2
3,475,866	-		HER17_RS15500	0.15	-0.3
3,475,875	-		HER17_RS15500	0.16	+0.5
3,475,898	+		HER17_RS15500	0.20	-2.5
3,475,898	+		HER17_RS15500	0.20	-0.4
3,475,901	+		HER17_RS15500	0.20	+0.1
3,475,901	+		HER17_RS15500	0.20	-0.1
3,475,901	+		HER17_RS15500	0.20	-0.2
3,475,902	-		HER17_RS15500	0.20	-0.1
3,475,902	-		HER17_RS15500	0.20	+0.6
3,475,902	-		HER17_RS15500	0.20	+0.3
3,475,964	+		HER17_RS15500	0.29	-0.0
3,476,022	+		HER17_RS15500	0.38	+0.3
3,476,022	+		HER17_RS15500	0.38	+0.9
3,476,023	-		HER17_RS15500	0.38	+0.4
3,476,233	+		HER17_RS15500	0.69	+0.7
3,476,234	-		HER17_RS15500	0.69	+0.5
3,476,234	-		HER17_RS15500	0.69	-0.9
3,476,234	-		HER17_RS15500	0.69	+0.2
3,476,234	-		HER17_RS15500	0.69	-0.2
3,476,234	-		HER17_RS15500	0.69	+0.1
3,476,265	+		HER17_RS15500	0.73	+1.7
3,476,265	+		HER17_RS15500	0.73	+0.0
3,476,265	+		HER17_RS15500	0.73	-0.8
3,476,265	+		HER17_RS15500	0.73	-0.8
3,476,266	-		HER17_RS15500	0.74	+0.2
3,476,266	-		HER17_RS15500	0.74	+0.1
3,476,269	+		HER17_RS15500	0.74	+1.4
3,476,329	+		HER17_RS15500	0.83	+0.1
3,476,329	+		HER17_RS15500	0.83	-0.2
3,476,330	-		HER17_RS15500	0.83	+0.7
3,476,330	-		HER17_RS15500	0.83	+0.6
3,476,330	-		HER17_RS15500	0.83	+0.5
3,476,426	+				-0.8
3,476,426	+				-0.7
3,476,426	+				-0.1
3,476,427	-				+0.5
3,476,427	-				-0.0
3,476,443	+				-0.2
3,476,444	-				-0.3
3,476,446	+				-0.1
3,476,450	+				+1.6
3,476,450	+				+0.5
3,476,451	-				+0.1
3,476,451	-				+0.3
3,476,451	-				+2.5
3,476,463	+				+1.4
3,476,467	+				-1.3
3,476,474	-				+0.1
3,476,624	-		HER17_RS15505	0.19	+0.3
3,476,700	-		HER17_RS15505	0.29	-0.5
3,476,710	+		HER17_RS15505	0.31	+0.4
3,476,713	+		HER17_RS15505	0.31	-0.5
3,476,714	-		HER17_RS15505	0.31	+0.2
3,476,732	+		HER17_RS15505	0.33	+0.7
3,476,817	+		HER17_RS15505	0.44	+0.5
3,476,817	+		HER17_RS15505	0.44	-0.2
3,476,817	+		HER17_RS15505	0.44	+0.3
3,476,818	-		HER17_RS15505	0.45	-0.3
3,476,818	-		HER17_RS15505	0.45	-0.1
3,476,820	+		HER17_RS15505	0.45	+1.0
3,476,820	+		HER17_RS15505	0.45	+0.6
3,476,821	-		HER17_RS15505	0.45	-0.6
3,476,821	-		HER17_RS15505	0.45	-0.1