Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15400

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,453,254	-		HER17_RS15395	0.54	-0.3
3,453,254	-		HER17_RS15395	0.54	+0.3
3,453,254	-		HER17_RS15395	0.54	-0.6
3,453,318	+		HER17_RS15395	0.57	+0.8
3,453,358	-		HER17_RS15395	0.59	+0.1
3,453,410	+		HER17_RS15395	0.61	-0.9
3,453,623	+		HER17_RS15395	0.72	+0.4
3,453,659	-		HER17_RS15395	0.73	+0.1
3,453,689	-		HER17_RS15395	0.75	-0.0
3,453,800	-		HER17_RS15395	0.80	-1.0
3,453,895	+		HER17_RS15395	0.85	+0.0
3,453,895	+		HER17_RS15395	0.85	+0.2
3,453,896	-		HER17_RS15395	0.85	-0.0
3,453,896	-		HER17_RS15395	0.85	-0.5
3,453,896	-		HER17_RS15395	0.85	-0.3
3,453,896	-		HER17_RS15395	0.85	+0.5
3,453,917	+		HER17_RS15395	0.86	-1.4
3,453,962	-		HER17_RS15395	0.88	+0.7
3,454,544	+		HER17_RS15400	0.71	+0.1
3,454,545	-		HER17_RS15400	0.71	+0.1
3,454,548	+		HER17_RS15400	0.72	+0.4
3,454,548	+		HER17_RS15400	0.72	+0.5
3,454,548	+		HER17_RS15400	0.72	-0.1
3,454,548	+		HER17_RS15400	0.72	+0.3
3,454,548	+		HER17_RS15400	0.72	-0.1
3,454,548	+		HER17_RS15400	0.72	-0.9
3,454,549	-		HER17_RS15400	0.72	-0.2
3,454,549	-		HER17_RS15400	0.72	-0.9
3,454,549	-		HER17_RS15400	0.72	-0.4
3,454,549	-		HER17_RS15400	0.72	-0.6
3,454,563	+		HER17_RS15400	0.75	+0.4
3,454,563	+		HER17_RS15400	0.75	-0.2
3,454,563	+		HER17_RS15400	0.75	+1.1
3,454,563	+		HER17_RS15400	0.75	+0.5
3,454,648	+				-0.7
3,454,649	-				+1.5
3,454,649	-				-0.4
3,454,667	+				-0.1
3,454,667	+				-0.1
3,454,668	-				-0.1
3,454,728	+				-0.5
3,454,728	+				+0.2
3,454,729	-				+0.7
3,454,770	-				+0.3
3,454,770	-				-0.8
3,454,770	-				-0.6
3,454,805	-				+0.9
3,454,830	-				+0.5
3,454,833	+				+0.7
3,454,855	+				+0.2
3,454,934	+				+0.4
3,454,934	+				+0.1
3,454,934	+				+0.5
3,454,935	-				-0.3
3,454,977	+		HER17_RS15405	0.12	-0.1
3,455,141	+		HER17_RS15405	0.35	-0.4
3,455,141	+		HER17_RS15405	0.35	-0.1
3,455,142	-		HER17_RS15405	0.35	+0.7
3,455,142	-		HER17_RS15405	0.35	-0.6
3,455,302	+		HER17_RS15405	0.57	-0.6
3,455,303	-		HER17_RS15405	0.57	-0.1
3,455,303	-		HER17_RS15405	0.57	-0.7
3,455,514	+		HER17_RS15405	0.87	-0.3
3,455,514	+		HER17_RS15405	0.87	-0.6
3,455,515	-		HER17_RS15405	0.87	+0.6
3,455,539	+				-0.7
3,455,539	+				-0.5
3,455,540	-				-0.6
3,455,540	-				-0.2
3,455,540	-				-0.2
3,455,561	+				+0.2
3,455,585	+				-0.8
3,455,611	+				+0.6
3,455,612	-				+2.1
3,455,612	-				+0.2
3,455,615	+				+0.1
3,455,615	+				-0.2
3,455,641	+				+0.4