Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS15335

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,434,472	+				+0.5
3,434,472	+				-0.0
3,434,513	+				-0.1
3,434,514	-				+1.3
3,434,570	+				-0.2
3,434,571	-				+0.3
3,434,581	+				-1.4
3,434,606	+				+0.6
3,434,871	+		HER17_RS15330	0.44	+0.0
3,434,871	+		HER17_RS15330	0.44	-0.0
3,434,871	+		HER17_RS15330	0.44	+0.0
3,434,871	+		HER17_RS15330	0.44	-0.0
3,434,872	-		HER17_RS15330	0.45	-0.2
3,434,874	+		HER17_RS15330	0.45	+0.0
3,434,874	+		HER17_RS15330	0.45	-0.9
3,434,874	+		HER17_RS15330	0.45	-0.7
3,434,875	-		HER17_RS15330	0.45	-0.3
3,434,875	-		HER17_RS15330	0.45	+0.7
3,434,945	-		HER17_RS15330	0.56	+0.1
3,434,949	+		HER17_RS15330	0.57	-0.4
3,435,066	+		HER17_RS15330	0.76	-1.2
3,435,067	-		HER17_RS15330	0.76	+0.6
3,435,067	-		HER17_RS15330	0.76	-0.5
3,435,105	-		HER17_RS15330	0.82	-0.3
3,435,200	+				-0.7
3,435,201	-				+1.4
3,435,201	-				-0.3
3,435,201	-				+0.0
3,435,265	+				-0.4
3,435,265	+				+0.4
3,435,266	-				+1.2
3,435,266	-				+0.5
3,435,271	-				+0.1
3,435,271	-				-1.1
3,435,287	-				-0.6
3,435,287	-				+0.0
3,435,288	+				+1.5
3,435,288	+				+0.0
3,435,288	+				-0.2
3,435,289	-				-2.1
3,435,289	-				+0.1
3,435,320	+				+0.7
3,435,320	+				+0.9
3,435,321	-				+0.2
3,435,394	+				-0.1
3,435,395	-				+0.4
3,435,529	-		HER17_RS15335	0.67	+0.2
3,435,539	-		HER17_RS15335	0.71	-0.2
3,435,539	-		HER17_RS15335	0.71	+0.1
3,435,541	-		HER17_RS15335	0.72	+0.3
3,435,541	-		HER17_RS15335	0.72	-0.5
3,435,593	+				+0.1
3,435,662	-				-0.3
3,435,726	+				-0.7
3,435,726	+				+0.3
3,435,726	+				-0.6
3,435,727	-				+0.6
3,435,733	+				-0.5
3,435,734	-				+0.4
3,435,818	+				-0.0
3,435,889	-				-0.7
3,436,045	+				+0.5
3,436,045	+				-0.2
3,436,045	+				-0.4
3,436,046	-				-0.5
3,436,130	+		HER17_RS15340	0.10	+0.9
3,436,131	-		HER17_RS15340	0.10	-0.1
3,436,141	-		HER17_RS15340	0.10	-0.0
3,436,180	+		HER17_RS15340	0.12	+0.1
3,436,248	-		HER17_RS15340	0.14	-0.6
3,436,280	+		HER17_RS15340	0.15	+0.0
3,436,280	+		HER17_RS15340	0.15	+0.3
3,436,281	-		HER17_RS15340	0.15	-0.4
3,436,281	-		HER17_RS15340	0.15	+0.4
3,436,283	-		HER17_RS15340	0.15	-0.2
3,436,283	-		HER17_RS15340	0.15	-0.1
3,436,299	+		HER17_RS15340	0.16	-0.8
3,436,304	-		HER17_RS15340	0.16	-0.4
3,436,375	+		HER17_RS15340	0.18	+0.0
3,436,375	+		HER17_RS15340	0.18	-1.5
3,436,375	+		HER17_RS15340	0.18	-0.4
3,436,375	+		HER17_RS15340	0.18	-0.0
3,436,376	-		HER17_RS15340	0.18	+0.2
3,436,376	-		HER17_RS15340	0.18	+0.1
3,436,376	-		HER17_RS15340	0.18	+0.8
3,436,376	-		HER17_RS15340	0.18	+0.3
3,436,376	-		HER17_RS15340	0.18	-0.3
3,436,382	+		HER17_RS15340	0.19	+1.7
3,436,382	+		HER17_RS15340	0.19	-0.2
3,436,420	+		HER17_RS15340	0.20	+0.3
3,436,421	-		HER17_RS15340	0.20	+1.2
3,436,441	+		HER17_RS15340	0.21	-0.3
3,436,441	+		HER17_RS15340	0.21	-0.1
3,436,442	-		HER17_RS15340	0.21	+0.2
3,436,452	+		HER17_RS15340	0.21	+0.7
3,436,453	-		HER17_RS15340	0.21	-0.7