Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS14775

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,323,885	-		HER17_RS14770	0.20	-2.2
3,324,062	-		HER17_RS14770	0.36	+0.0
3,324,113	+		HER17_RS14770	0.41	+0.7
3,324,113	+		HER17_RS14770	0.41	-0.3
3,324,114	-		HER17_RS14770	0.41	+0.2
3,324,124	+		HER17_RS14770	0.42	-0.5
3,324,124	+		HER17_RS14770	0.42	-0.3
3,324,124	+		HER17_RS14770	0.42	-0.1
3,324,125	-		HER17_RS14770	0.43	+0.6
3,324,141	+		HER17_RS14770	0.44	+0.5
3,324,141	+		HER17_RS14770	0.44	-0.6
3,324,141	+		HER17_RS14770	0.44	-0.1
3,324,141	+		HER17_RS14770	0.44	-0.5
3,324,161	-		HER17_RS14770	0.46	-1.7
3,324,161	-		HER17_RS14770	0.46	+0.1
3,324,174	-		HER17_RS14770	0.47	+0.6
3,324,211	+		HER17_RS14770	0.51	-0.5
3,324,242	+		HER17_RS14770	0.54	-0.3
3,324,242	+		HER17_RS14770	0.54	+0.4
3,324,242	+		HER17_RS14770	0.54	+0.8
3,324,242	+		HER17_RS14770	0.54	+0.0
3,324,242	+		HER17_RS14770	0.54	-0.4
3,324,243	-		HER17_RS14770	0.54	-0.7
3,324,243	-		HER17_RS14770	0.54	+1.3
3,324,243	-		HER17_RS14770	0.54	-0.1
3,324,246	+		HER17_RS14770	0.54	-0.4
3,324,246	+		HER17_RS14770	0.54	+0.6
3,324,246	+		HER17_RS14770	0.54	+0.3
3,324,246	+		HER17_RS14770	0.54	+0.9
3,324,246	+		HER17_RS14770	0.54	-0.2
3,324,246	+		HER17_RS14770	0.54	-0.2
3,324,247	-		HER17_RS14770	0.54	-0.6
3,324,247	-		HER17_RS14770	0.54	+0.3
3,324,247	-		HER17_RS14770	0.54	-0.2
3,324,247	-		HER17_RS14770	0.54	-1.1
3,324,247	-		HER17_RS14770	0.54	-0.6
3,324,247	-		HER17_RS14770	0.54	-0.1
3,324,247	-		HER17_RS14770	0.54	-0.6
3,324,274	+		HER17_RS14770	0.57	-0.3
3,324,277	+		HER17_RS14770	0.57	+0.0
3,324,277	+		HER17_RS14770	0.57	-0.7
3,324,278	-		HER17_RS14770	0.57	-0.3
3,324,278	-		HER17_RS14770	0.57	-0.1
3,324,278	-		HER17_RS14770	0.57	-0.1
3,324,278	-		HER17_RS14770	0.57	+0.1
3,324,278	-		HER17_RS14770	0.57	-1.7
3,324,278	-		HER17_RS14770	0.57	-0.0
3,324,424	+		HER17_RS14770	0.71	+0.3
3,324,424	+		HER17_RS14770	0.71	-0.7
3,324,425	-		HER17_RS14770	0.71	+0.2
3,324,428	+		HER17_RS14770	0.71	-1.1
3,324,429	-		HER17_RS14770	0.72	-0.4
3,324,473	+		HER17_RS14770	0.76	-0.1
3,324,473	+		HER17_RS14770	0.76	+0.6
3,324,527	+		HER17_RS14770	0.81	-0.1
3,324,592	+		HER17_RS14770	0.87	-0.2
3,324,689	-				+0.1
3,324,706	+				-1.2
3,324,747	-				-0.1
3,324,774	+				-0.7
3,324,795	-				+1.4
3,324,795	-				-0.0
3,324,833	+				+0.3
3,324,833	+				-0.8
3,324,834	-				-0.5
3,324,834	-				-0.5
3,324,834	-				-1.6
3,324,891	-				+0.5
3,325,084	-		HER17_RS14775	0.48	-0.1
3,325,089	+		HER17_RS14775	0.49	-0.0
3,325,090	-		HER17_RS14775	0.50	-0.1
3,325,099	+		HER17_RS14775	0.52	-0.2
3,325,100	-		HER17_RS14775	0.52	-0.6
3,325,164	+		HER17_RS14775	0.66	-0.1
3,325,167	+		HER17_RS14775	0.67	-0.4
3,325,168	-		HER17_RS14775	0.67	+0.2
3,325,168	-		HER17_RS14775	0.67	+0.4
3,325,168	-		HER17_RS14775	0.67	+1.0
3,325,184	+		HER17_RS14775	0.70	-0.1
3,325,227	+		HER17_RS14775	0.80	-1.2
3,325,228	-		HER17_RS14775	0.80	+0.6
3,325,228	-		HER17_RS14775	0.80	+0.5
3,325,308	+				-0.1
3,325,309	-				+0.7
3,325,316	-				-0.4
3,325,364	+				-0.9
3,325,365	-				-0.1
3,325,392	-				+0.6
3,325,397	+				-0.8
3,325,398	-				-0.5
3,325,398	-				-1.3
3,325,404	+				+0.4
3,325,404	+				+0.1
3,325,404	+				+0.1
3,325,405	-				+0.2
3,325,405	-				-0.3
3,325,405	-				+0.2
3,325,406	+				-0.1
3,325,406	+				-1.9
3,325,406	+				-0.5
3,325,407	-				-0.1
3,325,407	-				-0.5
3,325,407	-				-0.7
3,325,407	-				+0.6
3,325,536	-		HER17_RS14780	0.41	+0.4
3,325,600	+		HER17_RS14780	0.59	+0.1
3,325,652	-		HER17_RS14780	0.73	-0.1
3,325,664	+		HER17_RS14780	0.77	+0.5
3,325,727	+				+0.6
3,325,859	-				-0.6
3,325,940	+		HER17_RS14785	0.14	-0.3
3,325,958	+		HER17_RS14785	0.16	+0.6
3,325,958	+		HER17_RS14785	0.16	+0.8
3,326,042	+		HER17_RS14785	0.23	-0.2
3,326,043	-		HER17_RS14785	0.23	+0.1
3,326,061	+		HER17_RS14785	0.24	-0.1
3,326,061	+		HER17_RS14785	0.24	-0.5
3,326,062	-		HER17_RS14785	0.24	-0.4
3,326,076	-		HER17_RS14785	0.25	+0.9
3,326,076	-		HER17_RS14785	0.25	-0.2
3,326,084	+		HER17_RS14785	0.26	+0.4
3,326,085	-		HER17_RS14785	0.26	-0.2
3,326,085	-		HER17_RS14785	0.26	-0.4
3,326,129	+		HER17_RS14785	0.29	+0.2
3,326,129	+		HER17_RS14785	0.29	+1.2
3,326,133	-		HER17_RS14785	0.30	-0.5
3,326,133	-		HER17_RS14785	0.30	-0.2
3,326,282	+		HER17_RS14785	0.42	+0.3
3,326,282	+		HER17_RS14785	0.42	+0.5