Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS14270

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,206,743	+		HER17_RS14265	0.53	-0.1
3,206,744	-		HER17_RS14265	0.53	-0.8
3,206,749	+		HER17_RS14265	0.53	+1.1
3,206,749	+		HER17_RS14265	0.53	+1.2
3,206,749	+		HER17_RS14265	0.53	+0.7
3,206,749	+		HER17_RS14265	0.53	-0.1
3,206,750	-		HER17_RS14265	0.53	+0.6
3,206,750	-		HER17_RS14265	0.53	-0.0
3,206,750	-		HER17_RS14265	0.53	+0.9
3,206,750	-		HER17_RS14265	0.53	+0.0
3,206,752	-		HER17_RS14265	0.53	+0.4
3,206,839	+		HER17_RS14265	0.57	-0.3
3,206,839	+		HER17_RS14265	0.57	+0.1
3,206,854	-		HER17_RS14265	0.58	+0.6
3,206,863	+		HER17_RS14265	0.59	-1.0
3,206,863	+		HER17_RS14265	0.59	-0.5
3,206,863	+		HER17_RS14265	0.59	-1.7
3,206,863	+		HER17_RS14265	0.59	-0.3
3,206,880	+		HER17_RS14265	0.59	-1.4
3,206,947	+		HER17_RS14265	0.63	-1.2
3,206,948	-		HER17_RS14265	0.63	+0.5
3,206,948	-		HER17_RS14265	0.63	-1.1
3,206,978	-		HER17_RS14265	0.64	-0.1
3,207,025	+		HER17_RS14265	0.66	-0.5
3,207,026	-		HER17_RS14265	0.66	+0.6
3,207,187	+		HER17_RS14265	0.74	-0.3
3,207,259	+		HER17_RS14265	0.78	-0.4
3,207,259	+		HER17_RS14265	0.78	-0.9
3,207,260	-		HER17_RS14265	0.78	-0.3
3,207,260	-		HER17_RS14265	0.78	-0.2
3,207,261	+		HER17_RS14265	0.78	+0.3
3,207,261	+		HER17_RS14265	0.78	-0.4
3,207,261	+		HER17_RS14265	0.78	-0.2
3,207,290	-		HER17_RS14265	0.79	+0.7
3,207,363	+		HER17_RS14265	0.83	+0.2
3,207,445	+		HER17_RS14265	0.87	+0.4
3,207,445	+		HER17_RS14265	0.87	+0.3
3,207,445	+		HER17_RS14265	0.87	+0.7
3,207,445	+		HER17_RS14265	0.87	+0.4
3,207,445	+		HER17_RS14265	0.87	-0.0
3,207,445	+		HER17_RS14265	0.87	+0.6
3,207,446	-		HER17_RS14265	0.87	+0.2
3,207,446	-		HER17_RS14265	0.87	+0.5
3,207,446	-		HER17_RS14265	0.87	+0.0
3,207,446	-		HER17_RS14265	0.87	-0.9
3,207,446	-		HER17_RS14265	0.87	-0.2
3,207,446	-		HER17_RS14265	0.87	-0.8
3,207,448	-		HER17_RS14265	0.87	-0.2
3,207,492	-		HER17_RS14265	0.89	+0.3
3,207,493	+		HER17_RS14265	0.89	+0.3
3,207,493	+		HER17_RS14265	0.89	+0.6
3,207,493	+		HER17_RS14265	0.89	+0.3
3,207,494	-		HER17_RS14265	0.89	+0.1
3,207,513	+		HER17_RS14265	0.90	+0.6
3,207,514	-		HER17_RS14265	0.90	+0.1
3,207,514	-		HER17_RS14265	0.90	-0.9
3,207,531	+				+0.0
3,207,532	-				+0.4
3,207,532	-				+0.5
3,207,571	+				-0.1
3,207,579	+				-1.2
3,207,602	-				-0.4
3,207,655	-				-0.3
3,207,655	-				-0.0
3,207,670	+				+0.1
3,207,714	+				+0.4
3,207,734	+				+0.2
3,207,734	+				+0.8
3,207,735	-				-0.2
3,207,977	+		HER17_RS14270	0.23	+0.7
3,208,137	+		HER17_RS14270	0.39	-0.9
3,208,236	-		HER17_RS14270	0.48	+0.3
3,208,314	+		HER17_RS14270	0.55	-0.1
3,208,314	+		HER17_RS14270	0.55	-1.5
3,208,315	-		HER17_RS14270	0.55	-0.0
3,208,315	-		HER17_RS14270	0.55	-0.2
3,208,315	-		HER17_RS14270	0.55	-0.5
3,208,315	-		HER17_RS14270	0.55	-0.1
3,208,315	-		HER17_RS14270	0.55	+0.1
3,208,319	+		HER17_RS14270	0.56	-0.4
3,208,320	-		HER17_RS14270	0.56	+0.8
3,208,320	-		HER17_RS14270	0.56	+0.6
3,208,448	+		HER17_RS14270	0.68	+0.6
3,208,449	-		HER17_RS14270	0.68	-0.6
3,208,449	-		HER17_RS14270	0.68	+0.1
3,208,463	+		HER17_RS14270	0.69	+0.2
3,208,463	+		HER17_RS14270	0.69	+1.1
3,208,464	-		HER17_RS14270	0.69	-0.6
3,208,464	-		HER17_RS14270	0.69	+0.8
3,208,475	+		HER17_RS14270	0.70	-0.3
3,208,476	-		HER17_RS14270	0.71	+0.7
3,208,499	+		HER17_RS14270	0.73	-0.4
3,208,499	+		HER17_RS14270	0.73	-1.4
3,208,503	+		HER17_RS14270	0.73	-0.2
3,208,503	+		HER17_RS14270	0.73	+0.0
3,208,504	-		HER17_RS14270	0.73	-0.0
3,208,504	-		HER17_RS14270	0.73	+1.1
3,208,504	-		HER17_RS14270	0.73	+0.4
3,208,638	+		HER17_RS14270	0.86	+0.8
3,208,638	+		HER17_RS14270	0.86	-0.2
3,208,638	+		HER17_RS14270	0.86	-0.0
3,208,639	-		HER17_RS14270	0.86	+0.0
3,208,639	-		HER17_RS14270	0.86	+0.3
3,208,685	+				-1.2
3,208,685	+				+0.1
3,208,685	+				-0.7
3,208,686	-				-0.2
3,208,686	-				+0.4
3,208,737	+				+0.1
3,208,737	+				+0.2
3,208,738	-				-0.2
3,208,738	-				-0.1
3,208,759	-				-0.3
3,208,759	-				-0.4
3,208,800	+				-0.1
3,208,800	+				-0.8
3,208,801	-				+0.8
3,208,801	-				+1.3
3,208,801	-				+0.9
3,208,843	+				-0.1
3,208,853	+				-0.4
3,208,853	+				+1.1
3,208,888	+				-0.1
3,208,888	+				+0.8
3,208,889	-				+1.1
3,208,889	-				-0.0
3,208,971	+				-0.2
3,208,971	+				-0.2
3,208,971	+				+0.5
3,208,972	-				-0.1
3,208,972	-				+0.0
3,208,986	+				-0.5
3,208,987	-				+0.6
3,208,990	+				+0.5
3,208,990	+				-0.1
3,208,991	-				-0.1
3,209,035	+				-1.2
3,209,036	-				+0.1
3,209,036	-				+0.1
3,209,067	+				+0.4
3,209,067	+				+0.1
3,209,127	-		HER17_RS14275	0.11	-0.1
3,209,157	+		HER17_RS14275	0.13	+0.6
3,209,158	-		HER17_RS14275	0.13	+0.4
3,209,166	-		HER17_RS14275	0.14	+0.5
3,209,267	+		HER17_RS14275	0.24	-0.6
3,209,268	-		HER17_RS14275	0.24	+0.1
3,209,339	+		HER17_RS14275	0.30	+0.6
3,209,340	-		HER17_RS14275	0.30	+0.3
3,209,343	-		HER17_RS14275	0.31	+0.8
3,209,477	+		HER17_RS14275	0.43	+1.1
3,209,485	+		HER17_RS14275	0.44	+0.6
3,209,486	-		HER17_RS14275	0.44	+0.0
3,209,525	-		HER17_RS14275	0.48	-1.8