Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS12035

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,677,777	-		HER17_RS12030	0.34	+1.2
2,677,822	+		HER17_RS12030	0.38	+0.0
2,678,061	+		HER17_RS12030	0.58	-0.1
2,678,093	+		HER17_RS12030	0.60	-0.8
2,678,094	-		HER17_RS12030	0.60	+0.8
2,678,104	+		HER17_RS12030	0.61	+0.1
2,678,221	+		HER17_RS12030	0.71	+0.0
2,678,221	+		HER17_RS12030	0.71	+0.3
2,678,221	+		HER17_RS12030	0.71	+0.2
2,678,335	-		HER17_RS12030	0.81	+0.2
2,678,355	+		HER17_RS12030	0.82	-0.4
2,678,356	-		HER17_RS12030	0.82	+0.4
2,678,648	+				+0.0
2,678,704	+				+0.6
2,678,705	-				-0.5
2,678,717	+				-0.7
2,678,780	-		HER17_RS12035	0.18	-0.6
2,678,855	-		HER17_RS12035	0.30	-0.1
2,678,914	+		HER17_RS12035	0.39	+0.2
2,678,914	+		HER17_RS12035	0.39	-0.1
2,678,915	-		HER17_RS12035	0.39	+1.0
2,678,915	-		HER17_RS12035	0.39	-0.2
2,679,042	-		HER17_RS12035	0.58	+0.1
2,679,257	+				-0.6
2,679,257	+				+0.1
2,679,258	-				+0.0
2,679,303	+				+0.0
2,679,328	-				-0.3
2,679,449	+				+0.5
2,679,452	+		HER17_RS12040	0.10	+0.5
2,679,452	+		HER17_RS12040	0.10	+0.1
2,679,453	-		HER17_RS12040	0.10	-1.1
2,679,453	-		HER17_RS12040	0.10	+0.6
2,679,587	-		HER17_RS12040	0.35	-0.7
2,679,600	+		HER17_RS12040	0.37	+1.0
2,679,600	+		HER17_RS12040	0.37	+0.5
2,679,601	-		HER17_RS12040	0.37	+1.0
2,679,601	-		HER17_RS12040	0.37	+0.8
2,679,601	-		HER17_RS12040	0.37	+0.3
2,679,605	-		HER17_RS12040	0.38	+0.5
2,679,605	-		HER17_RS12040	0.38	+0.9
2,679,632	-		HER17_RS12040	0.43	+0.7
2,679,708	+		HER17_RS12040	0.57	+0.7
2,679,762	+		HER17_RS12040	0.66	+0.6
2,679,763	-		HER17_RS12040	0.67	-0.5
2,679,763	-		HER17_RS12040	0.67	+0.2
2,679,945	+				+0.2
2,679,954	+				+0.6
2,679,976	-				-1.1
2,680,009	+				-1.5
2,680,091	+				-1.7
2,680,092	-				-0.3
2,680,092	-				-2.0
2,680,112	+				+0.0
2,680,122	-				-0.1
2,680,125	+				-0.8
2,680,125	+				-0.8
2,680,126	-				+1.3
2,680,126	-				+0.6
2,680,185	+				-0.7
2,680,185	+				-1.3
2,680,186	-				-0.4
2,680,191	+				-0.4
2,680,242	-				+0.6
2,680,245	+				+0.4
2,680,245	+				-1.4
2,680,249	-				+0.0
2,680,249	-				+1.6
2,680,249	-				+1.3
2,680,249	-				+0.1
2,680,249	-				-0.5
2,680,249	-				-0.2
2,680,291	+				+1.2
2,680,292	-				+0.5