Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS09470

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,082,458	+		HER17_RS09465	0.20	+0.1
2,082,459	-		HER17_RS09465	0.20	+0.4
2,082,459	-		HER17_RS09465	0.20	+0.5
2,082,459	-		HER17_RS09465	0.20	-2.0
2,082,459	-		HER17_RS09465	0.20	+0.5
2,082,462	+		HER17_RS09465	0.20	+0.6
2,082,493	+		HER17_RS09465	0.23	+1.2
2,082,516	+		HER17_RS09465	0.26	+0.3
2,082,517	-		HER17_RS09465	0.26	-0.0
2,082,580	+		HER17_RS09465	0.32	-0.3
2,082,650	-		HER17_RS09465	0.40	-0.5
2,082,669	-		HER17_RS09465	0.41	-1.4
2,082,669	-		HER17_RS09465	0.41	-0.0
2,082,681	+		HER17_RS09465	0.43	+0.4
2,082,728	+		HER17_RS09465	0.48	+1.7
2,082,728	+		HER17_RS09465	0.48	-0.2
2,082,728	+		HER17_RS09465	0.48	-0.2
2,082,729	-		HER17_RS09465	0.48	+0.1
2,082,729	-		HER17_RS09465	0.48	-1.0
2,082,730	+		HER17_RS09465	0.48	+1.0
2,082,730	+		HER17_RS09465	0.48	-0.0
2,082,913	+		HER17_RS09465	0.67	-0.0
2,082,967	+		HER17_RS09465	0.72	-0.2
2,082,967	+		HER17_RS09465	0.72	+0.7
2,082,967	+		HER17_RS09465	0.72	-0.0
2,082,967	+		HER17_RS09465	0.72	-0.8
2,082,968	-		HER17_RS09465	0.72	-2.2
2,082,971	+		HER17_RS09465	0.73	-0.4
2,082,971	+		HER17_RS09465	0.73	-0.0
2,082,971	+		HER17_RS09465	0.73	-0.2
2,082,971	+		HER17_RS09465	0.73	+0.0
2,082,971	+		HER17_RS09465	0.73	-0.6
2,082,971	+		HER17_RS09465	0.73	-1.0
2,082,971	+		HER17_RS09465	0.73	+0.7
2,082,971	+		HER17_RS09465	0.73	-1.4
2,082,971	+		HER17_RS09465	0.73	+1.0
2,082,972	-		HER17_RS09465	0.73	-1.0
2,082,972	-		HER17_RS09465	0.73	+0.8
2,082,972	-		HER17_RS09465	0.73	+1.2
2,082,972	-		HER17_RS09465	0.73	+0.5
2,082,972	-		HER17_RS09465	0.73	-0.0
2,082,972	-		HER17_RS09465	0.73	-0.9
2,082,972	-		HER17_RS09465	0.73	+0.3
2,082,972	-		HER17_RS09465	0.73	-0.6
2,082,972	-		HER17_RS09465	0.73	+0.1
2,082,972	-		HER17_RS09465	0.73	-0.7
2,082,972	-		HER17_RS09465	0.73	-0.6
2,082,979	+		HER17_RS09465	0.73	-0.6
2,082,979	+		HER17_RS09465	0.73	+1.2
2,082,979	+		HER17_RS09465	0.73	+0.5
2,082,980	-		HER17_RS09465	0.73	-1.6
2,083,036	+		HER17_RS09465	0.79	-0.2
2,083,037	-		HER17_RS09465	0.79	-0.0
2,083,037	-		HER17_RS09465	0.79	+0.4
2,083,067	+		HER17_RS09465	0.82	+0.4
2,083,067	+		HER17_RS09465	0.82	+0.5
2,083,068	-		HER17_RS09465	0.83	+0.6
2,083,068	-		HER17_RS09465	0.83	+0.3
2,083,068	-		HER17_RS09465	0.83	+0.1
2,083,082	+		HER17_RS09465	0.84	-0.0
2,083,083	-		HER17_RS09465	0.84	-0.0
2,083,116	+		HER17_RS09465	0.87	-0.3
2,083,116	+		HER17_RS09465	0.87	-0.1
2,083,169	-				-1.6
2,083,191	-				-0.7
2,083,218	-				+0.8
2,083,225	+				-0.4
2,083,235	+				-0.4
2,083,236	-				-0.3
2,083,236	-				-0.7
2,083,236	-				+0.0
2,083,236	-				+0.7
2,083,247	+				+0.1
2,083,247	+				+0.2
2,083,247	+				+1.2
2,083,248	-				+0.1
2,083,251	+				+0.9
2,083,285	-				+0.5
2,083,289	+				+0.5
2,083,293	-				+0.5
2,083,302	-				+0.7
2,083,344	+				-0.3
2,083,344	+				+0.4
2,083,345	-				+0.1
2,083,348	-				+0.3
2,083,357	+				+0.2
2,083,357	+				-0.9
2,083,357	+				-0.4
2,083,357	+				+0.1
2,083,358	-				-0.8
2,083,358	-				-0.0
2,083,358	-				+0.3
2,083,376	+				-0.0
2,083,377	-				-2.6
2,083,390	+				+0.3
2,084,458	+		HER17_RS09475	0.11	-0.3
2,084,458	+		HER17_RS09475	0.11	-0.9
2,084,459	-		HER17_RS09475	0.11	-0.7
2,084,617	-		HER17_RS09475	0.30	-0.5
2,084,635	-		HER17_RS09475	0.32	-0.0
2,084,641	-		HER17_RS09475	0.33	-1.0
2,084,641	-		HER17_RS09475	0.33	+0.4
2,084,751	-		HER17_RS09475	0.47	-0.9
2,084,753	+		HER17_RS09475	0.47	-2.5
2,084,754	-		HER17_RS09475	0.47	-0.6
2,084,770	+		HER17_RS09475	0.49	-2.0
2,085,081	+		HER17_RS09475	0.87	-1.2