Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS09230

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,024,633	+				+0.3
2,024,633	+				-0.5
2,024,633	+				+0.2
2,024,633	+				+0.2
2,024,633	+				-0.6
2,024,633	+				-0.2
2,024,634	-				-1.4
2,024,634	-				-1.4
2,024,634	-				-0.6
2,024,634	-				-1.0
2,024,647	+				-0.5
2,024,647	+				-0.7
2,024,689	+				-0.3
2,024,690	-				+0.1
2,024,721	-				-0.4
2,024,721	-				+0.5
2,024,721	-				-0.7
2,024,742	+				-1.0
2,024,763	-				+0.1
2,024,764	+				+1.8
2,024,764	+				+1.1
2,024,765	-				+0.2
2,024,765	-				+1.0
2,024,765	-				+0.5
2,024,796	+				-0.1
2,024,796	+				-0.1
2,024,797	-				+0.0
2,024,805	+				+0.0
2,024,872	+				-0.5
2,024,872	+				-0.4
2,025,523	+				-0.4
2,025,538	-				-0.2
2,025,538	-				+0.1
2,025,562	-				+0.6
2,025,562	-				-0.3
2,025,600	+				-0.4
2,025,601	-				-0.3
2,025,683	+				-0.5
2,025,684	-				-0.4
2,025,688	+				+0.4
2,025,689	-				+0.8
2,025,689	-				-1.4
2,025,691	+				+0.7
2,025,691	+				-0.2
2,025,692	-				-0.2
2,025,719	+		HER17_RS09230	0.12	-0.4
2,025,720	-		HER17_RS09230	0.12	+0.7
2,025,720	-		HER17_RS09230	0.12	-0.0
2,025,720	-		HER17_RS09230	0.12	-0.1
2,025,721	+		HER17_RS09230	0.12	+0.1
2,025,787	+		HER17_RS09230	0.18	+0.9
2,025,787	+		HER17_RS09230	0.18	+0.3
2,025,803	+		HER17_RS09230	0.19	-0.1
2,025,804	-		HER17_RS09230	0.19	-0.1
2,025,848	+		HER17_RS09230	0.23	+1.1
2,025,849	-		HER17_RS09230	0.23	+0.7
2,025,849	-		HER17_RS09230	0.23	-0.3
2,025,849	-		HER17_RS09230	0.23	-0.9
2,025,856	-		HER17_RS09230	0.24	+0.8
2,025,884	+		HER17_RS09230	0.26	-0.1
2,025,884	+		HER17_RS09230	0.26	-0.0
2,025,884	+		HER17_RS09230	0.26	-0.2
2,025,885	-		HER17_RS09230	0.26	+0.1
2,025,885	-		HER17_RS09230	0.26	+0.2
2,025,885	-		HER17_RS09230	0.26	+0.9
2,025,886	+		HER17_RS09230	0.26	+0.4
2,025,886	+		HER17_RS09230	0.26	+0.4
2,025,886	+		HER17_RS09230	0.26	-0.3
2,025,886	+		HER17_RS09230	0.26	-0.1
2,025,887	-		HER17_RS09230	0.26	-0.5
2,025,887	-		HER17_RS09230	0.26	+0.3
2,025,887	-		HER17_RS09230	0.26	+0.1
2,025,887	-		HER17_RS09230	0.26	+0.3
2,025,887	-		HER17_RS09230	0.26	-1.0
2,025,887	-		HER17_RS09230	0.26	-0.8
2,025,890	+		HER17_RS09230	0.26	+0.2
2,025,891	-		HER17_RS09230	0.27	-0.0
2,025,891	-		HER17_RS09230	0.27	-0.5
2,025,891	-		HER17_RS09230	0.27	-0.7
2,025,908	+		HER17_RS09230	0.28	-0.5
2,025,909	-		HER17_RS09230	0.28	-0.4
2,025,923	+		HER17_RS09230	0.29	-0.2
2,025,923	+		HER17_RS09230	0.29	+0.1
2,025,923	+		HER17_RS09230	0.29	+0.6
2,025,923	+		HER17_RS09230	0.29	+0.2
2,025,938	+		HER17_RS09230	0.31	+0.8
2,025,939	-		HER17_RS09230	0.31	-0.6
2,025,939	-		HER17_RS09230	0.31	+0.8
2,025,942	+		HER17_RS09230	0.31	-0.3
2,025,942	+		HER17_RS09230	0.31	+0.1
2,025,943	-		HER17_RS09230	0.31	+0.3
2,025,972	-		HER17_RS09230	0.34	+0.3
2,025,972	-		HER17_RS09230	0.34	-0.3
2,025,991	+		HER17_RS09230	0.35	-0.9
2,026,000	+		HER17_RS09230	0.36	-0.7
2,026,001	-		HER17_RS09230	0.36	-0.4
2,026,274	+		HER17_RS09230	0.60	-1.5
2,026,275	-		HER17_RS09230	0.60	+0.9
2,026,275	-		HER17_RS09230	0.60	-0.7
2,026,275	-		HER17_RS09230	0.60	+0.0
2,026,327	+		HER17_RS09230	0.64	-0.0
2,026,328	-		HER17_RS09230	0.64	+0.2
2,026,328	-		HER17_RS09230	0.64	-0.6
2,026,328	-		HER17_RS09230	0.64	+0.3
2,026,336	+		HER17_RS09230	0.65	+0.4
2,026,336	+		HER17_RS09230	0.65	+0.2
2,026,337	-		HER17_RS09230	0.65	+0.3
2,026,344	+		HER17_RS09230	0.66	+0.2
2,026,344	+		HER17_RS09230	0.66	+0.6
2,026,345	-		HER17_RS09230	0.66	-0.0
2,026,345	-		HER17_RS09230	0.66	+0.2
2,026,345	-		HER17_RS09230	0.66	-0.7
2,026,345	-		HER17_RS09230	0.66	-0.2
2,026,367	+		HER17_RS09230	0.68	+0.0
2,026,371	+		HER17_RS09230	0.68	+0.3
2,026,372	-		HER17_RS09230	0.68	+0.4
2,026,378	+		HER17_RS09230	0.69	-0.1
2,026,378	+		HER17_RS09230	0.69	+0.7
2,026,379	-		HER17_RS09230	0.69	+0.8
2,026,552	+		HER17_RS09230	0.84	+0.7
2,026,552	+		HER17_RS09230	0.84	-0.3
2,026,552	+		HER17_RS09230	0.84	+1.2
2,026,552	+		HER17_RS09230	0.84	+0.4
2,026,553	-		HER17_RS09230	0.84	+0.6
2,026,553	-		HER17_RS09230	0.84	-0.4
2,026,589	+		HER17_RS09230	0.87	-0.3
2,026,721	+				-1.7
2,026,721	+				-1.8
2,026,722	-				-0.0
2,026,723	+				+0.7
2,026,723	+				-0.5
2,026,724	-				-0.5
2,026,728	+				+0.1
2,026,755	+				-0.4
2,026,762	-				+0.5
2,026,771	+				+0.6
2,026,773	-				-0.7
2,026,773	-				+0.6
2,026,850	-				-0.2
2,026,870	-				-0.3
2,026,927	+				-0.8
2,027,006	+				-0.2
2,027,059	+		HER17_RS09235	0.11	+0.2
2,027,060	-		HER17_RS09235	0.11	+0.6
2,027,206	+		HER17_RS09235	0.26	-0.5
2,027,207	-		HER17_RS09235	0.26	-0.6
2,027,467	+		HER17_RS09235	0.51	-0.6
2,027,468	-		HER17_RS09235	0.51	+0.4
2,027,469	+		HER17_RS09235	0.51	+0.1
2,027,469	+		HER17_RS09235	0.51	+0.3
2,027,470	-		HER17_RS09235	0.51	-0.2
2,027,470	-		HER17_RS09235	0.51	+0.4
2,027,470	-		HER17_RS09235	0.51	+0.0
2,027,683	+		HER17_RS09235	0.72	-0.4
2,027,683	+		HER17_RS09235	0.72	+0.5
2,027,684	-		HER17_RS09235	0.72	-0.4
2,027,700	+		HER17_RS09235	0.74	+0.3