Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS08405

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,852,476	+				+0.8
1,852,476	+				+0.3
1,852,476	+				+0.6
1,852,541	+				+0.6
1,852,542	-				+0.3
1,852,587	+				+0.3
1,852,600	+				+0.5
1,852,601	-				+0.5
1,852,601	-				+1.3
1,852,601	-				-0.1
1,852,601	-				+0.2
1,852,603	-				-0.2
1,852,603	-				-0.2
1,852,637	+				+0.1
1,852,637	+				-0.2
1,852,637	+				+0.6
1,852,638	-				+0.5
1,852,640	+				-1.4
1,852,640	+				-0.0
1,852,641	-				-1.4
1,852,641	-				+0.4
1,852,641	-				-0.1
1,852,641	-				-0.3
1,852,641	-				+0.2
1,852,641	-				+0.0
1,852,641	-				+0.1
1,852,694	+				-0.0
1,852,695	-				+0.2
1,852,720	+				-0.3
1,852,785	-		HER17_RS08400	0.15	+0.3
1,852,836	-		HER17_RS08400	0.22	+0.2
1,852,836	-		HER17_RS08400	0.22	+0.3
1,852,842	-		HER17_RS08400	0.23	-0.2
1,853,052	-		HER17_RS08400	0.56	+0.3
1,853,052	-		HER17_RS08400	0.56	+0.4
1,853,075	+		HER17_RS08400	0.59	-0.4
1,853,076	-		HER17_RS08400	0.59	-1.0
1,853,087	+		HER17_RS08400	0.61	-0.4
1,853,088	-		HER17_RS08400	0.61	-0.4
1,853,140	+		HER17_RS08400	0.69	-1.5
1,853,141	-		HER17_RS08400	0.69	-0.2
1,853,141	-		HER17_RS08400	0.69	-1.8
1,853,208	+		HER17_RS08400	0.79	-0.1
1,853,259	+		HER17_RS08400	0.87	-0.2
1,853,290	+				+0.5
1,853,340	+				+0.3
1,853,340	+				-0.1
1,853,341	-				+0.7
1,853,341	-				-0.6
1,853,341	-				+0.1
1,853,341	-				+0.3
1,853,341	-				+0.2
1,853,344	-				-0.2
1,853,357	+				+0.2
1,853,372	+				+0.2
1,853,438	+				-0.2
1,854,049	-				-0.6
1,854,073	+				-1.6
1,854,073	+				+0.3
1,854,148	-				+0.5
1,854,148	-				-0.2
1,854,148	-				-0.4
1,854,152	+				-0.4
1,854,152	+				-0.6
1,854,152	+				+0.3
1,854,152	+				+0.5
1,854,152	+				-0.1
1,854,153	-				-1.5
1,854,153	-				+0.6
1,854,260	+		HER17_RS08410	0.12	-0.1
1,854,261	-		HER17_RS08410	0.12	-1.1
1,854,261	-		HER17_RS08410	0.12	+0.7
1,854,261	-		HER17_RS08410	0.12	+0.4
1,854,265	+		HER17_RS08410	0.12	-0.3
1,854,266	-		HER17_RS08410	0.12	+0.9
1,854,275	+		HER17_RS08410	0.13	+1.0
1,854,489	+		HER17_RS08410	0.25	-0.4
1,854,489	+		HER17_RS08410	0.25	-0.2
1,854,489	+		HER17_RS08410	0.25	-0.3
1,854,578	-		HER17_RS08410	0.30	-0.1
1,854,591	-		HER17_RS08410	0.31	-0.5
1,854,805	-		HER17_RS08410	0.43	-0.0
1,854,876	+		HER17_RS08410	0.47	-0.5
1,854,876	+		HER17_RS08410	0.47	+0.1
1,854,877	-		HER17_RS08410	0.47	-0.9
1,854,879	-		HER17_RS08410	0.47	-0.7
1,854,879	-		HER17_RS08410	0.47	-0.3
1,854,889	-		HER17_RS08410	0.48	+0.6
1,854,889	-		HER17_RS08410	0.48	+0.9
1,854,889	-		HER17_RS08410	0.48	-0.0
1,854,920	+		HER17_RS08410	0.49	+0.6