Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS08375

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,844,466	+		HER17_RS08365	0.47	-0.1
1,844,477	-		HER17_RS08365	0.48	+0.3
1,844,498	+		HER17_RS08365	0.51	-1.8
1,844,520	+		HER17_RS08365	0.53	+0.2
1,844,520	+		HER17_RS08365	0.53	-0.2
1,844,555	+		HER17_RS08365	0.58	-0.4
1,844,603	+		HER17_RS08365	0.64	+0.2
1,844,605	+		HER17_RS08365	0.64	+0.9
1,844,866	+				-0.4
1,844,867	-				-0.7
1,844,880	-				-0.3
1,844,965	+				-0.9
1,844,966	-				-1.3
1,844,966	-				+0.4
1,844,969	-				+0.5
1,844,979	+				+0.1
1,844,979	+				-0.1
1,844,979	+				+0.1
1,844,979	+				-2.2
1,844,979	+				-0.6
1,844,979	+				+0.8
1,844,979	+				-0.3
1,844,980	-				-0.4
1,844,980	-				+0.0
1,844,980	-				+0.5
1,844,980	-				-0.4
1,844,980	-				+0.4
1,844,980	-				+0.4
1,845,103	-				+0.1
1,845,104	+				+0.1
1,845,121	-				+0.9
1,845,147	-				+0.2
1,845,147	-				+0.8
1,845,270	+				+0.8
1,845,273	+				+0.2
1,845,273	+				+0.3
1,845,273	+				+0.3
1,845,274	-				+0.7
1,845,275	+				+0.2
1,845,276	-				+0.8
1,845,276	-				-0.3
1,845,288	-				+0.0
1,845,324	+				+0.3
1,845,351	+				-2.5
1,845,360	+				+0.8
1,845,396	+				-0.5
1,845,396	+				+0.1
1,845,397	-				-0.3
1,845,461	-				+0.3
1,845,481	+				+0.5
1,845,482	-				-0.4
1,845,482	-				+0.3
1,845,482	-				-0.2
1,845,520	+				+0.5
1,845,521	-				+0.7
1,845,521	-				+0.2
1,845,533	+		HER17_RS08375	0.12	-1.2
1,845,601	+		HER17_RS08375	0.22	-0.8
1,845,602	-		HER17_RS08375	0.22	+0.4
1,845,602	-		HER17_RS08375	0.22	-0.6
1,845,602	-		HER17_RS08375	0.22	-0.9
1,845,602	-		HER17_RS08375	0.22	+0.1
1,845,615	+		HER17_RS08375	0.24	-0.6
1,845,638	+		HER17_RS08375	0.28	+0.2
1,845,638	+		HER17_RS08375	0.28	+0.4
1,845,638	+		HER17_RS08375	0.28	+0.3
1,845,639	-		HER17_RS08375	0.28	+0.5
1,845,639	-		HER17_RS08375	0.28	-0.6
1,845,754	+		HER17_RS08375	0.46	+0.7
1,845,765	+		HER17_RS08375	0.48	+0.1
1,845,766	-		HER17_RS08375	0.48	+0.2
1,845,799	+		HER17_RS08375	0.53	-0.1
1,845,799	+		HER17_RS08375	0.53	-0.6
1,845,799	+		HER17_RS08375	0.53	+0.7
1,845,800	-		HER17_RS08375	0.53	-0.6
1,845,800	-		HER17_RS08375	0.53	-0.4
1,845,800	-		HER17_RS08375	0.53	+1.3
1,845,800	-		HER17_RS08375	0.53	-0.5
1,845,834	+		HER17_RS08375	0.59	-0.2
1,845,851	+		HER17_RS08375	0.61	-0.1
1,845,851	+		HER17_RS08375	0.61	-0.1
1,845,952	+		HER17_RS08375	0.77	-0.5
1,845,952	+		HER17_RS08375	0.77	+0.2
1,845,952	+		HER17_RS08375	0.77	-0.7
1,845,952	+		HER17_RS08375	0.77	+1.6
1,845,953	-		HER17_RS08375	0.77	-0.4
1,845,953	-		HER17_RS08375	0.77	-0.5
1,845,953	-		HER17_RS08375	0.77	-0.4
1,845,983	-		HER17_RS08375	0.82	-0.5
1,846,164	+				-0.0
1,846,258	+				+0.3
1,846,358	+				-0.4
1,846,358	+				+0.8
1,846,359	-				+0.1
1,846,483	+				+0.8
1,846,484	-				-0.4
1,846,484	-				+1.0
1,846,494	-				+0.2
1,846,514	+				+0.8
1,846,514	+				-0.6
1,846,515	-				+0.4
1,846,529	+		HER17_RS08380	0.11	+0.0
1,846,529	+		HER17_RS08380	0.11	+0.2
1,846,532	-		HER17_RS08380	0.11	+0.7
1,846,575	+		HER17_RS08380	0.13	+0.3
1,846,575	+		HER17_RS08380	0.13	-0.0
1,846,647	-		HER17_RS08380	0.16	-0.5
1,846,695	-		HER17_RS08380	0.19	-0.4
1,846,695	-		HER17_RS08380	0.19	+0.9
1,846,721	+		HER17_RS08380	0.20	+0.7
1,846,815	+		HER17_RS08380	0.25	-0.5
1,846,816	-		HER17_RS08380	0.25	+0.7
1,846,856	+		HER17_RS08380	0.27	-0.4
1,846,857	-		HER17_RS08380	0.27	-0.6
1,846,858	+		HER17_RS08380	0.27	-1.1
1,846,859	-		HER17_RS08380	0.27	+1.0
1,846,875	-		HER17_RS08380	0.28	-0.9
1,847,086	+		HER17_RS08380	0.38	+0.4
1,847,086	+		HER17_RS08380	0.38	-0.1
1,847,087	-		HER17_RS08380	0.38	+0.4
1,847,087	-		HER17_RS08380	0.38	-0.9
1,847,087	-		HER17_RS08380	0.38	+0.4