Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS07940

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,744,373	+				+0.5
1,744,391	+				-0.2
1,744,393	+				-1.2
1,744,407	+				+0.1
1,744,407	+				+1.2
1,744,421	+				+0.5
1,744,449	+				+0.5
1,744,604	+		HER17_RS07930	0.59	+0.4
1,744,605	-		HER17_RS07930	0.59	-0.9
1,744,606	+		HER17_RS07930	0.60	-0.6
1,744,607	-		HER17_RS07930	0.60	-1.0
1,744,795	+		HER17_RS07935	0.20	+0.1
1,744,881	+		HER17_RS07935	0.34	-0.9
1,744,893	+		HER17_RS07935	0.36	-1.1
1,744,901	+		HER17_RS07935	0.37	-1.5
1,744,901	+		HER17_RS07935	0.37	-0.1
1,744,902	-		HER17_RS07935	0.37	-0.3
1,744,902	-		HER17_RS07935	0.37	-1.3
1,744,902	-		HER17_RS07935	0.37	-0.8
1,744,975	-		HER17_RS07935	0.49	+0.5
1,744,978	+		HER17_RS07935	0.50	-0.3
1,744,988	+		HER17_RS07935	0.52	+0.9
1,745,066	-		HER17_RS07935	0.65	-0.6
1,745,082	+		HER17_RS07935	0.67	+0.1
1,745,211	+		HER17_RS07935	0.89	+0.2
1,745,360	+		HER17_RS07940	0.14	-0.1
1,745,361	-		HER17_RS07940	0.14	+1.4
1,745,425	+		HER17_RS07940	0.27	+0.2
1,745,507	+		HER17_RS07940	0.43	-1.8
1,745,510	+		HER17_RS07940	0.44	+0.1
1,745,510	+		HER17_RS07940	0.44	+0.9
1,745,510	+		HER17_RS07940	0.44	-0.5
1,745,511	-		HER17_RS07940	0.44	+0.6
1,745,514	+		HER17_RS07940	0.44	+0.6
1,745,514	+		HER17_RS07940	0.44	+0.8
1,745,515	-		HER17_RS07940	0.45	-0.1
1,745,515	-		HER17_RS07940	0.45	-1.7
1,745,515	-		HER17_RS07940	0.45	-1.2
1,745,569	+		HER17_RS07940	0.55	+0.6
1,745,698	+		HER17_RS07940	0.80	+0.2
1,745,699	-		HER17_RS07940	0.81	+0.5
1,745,702	+		HER17_RS07940	0.81	-0.2
1,745,763	+				-0.2
1,745,763	+				-0.8
1,745,882	+		HER17_RS07945	0.18	+0.5
1,745,883	-		HER17_RS07945	0.19	+0.4
1,745,955	-		HER17_RS07945	0.53	-0.2
1,745,976	-		HER17_RS07945	0.62	+0.1
1,745,981	+		HER17_RS07945	0.65	-0.1
1,745,982	-		HER17_RS07945	0.65	+0.6
1,745,982	-		HER17_RS07945	0.65	+0.2
1,746,008	+		HER17_RS07945	0.77	-0.4
1,746,009	-		HER17_RS07945	0.78	+1.9
1,746,009	-		HER17_RS07945	0.78	+0.3
1,746,018	+		HER17_RS07945	0.82	-0.3
1,746,018	+		HER17_RS07945	0.82	-0.1
1,746,018	+		HER17_RS07945	0.82	-0.2
1,746,018	+		HER17_RS07945	0.82	-0.3
1,746,019	-		HER17_RS07945	0.83	-0.2
1,746,019	-		HER17_RS07945	0.83	+0.2
1,746,019	-		HER17_RS07945	0.83	+0.4
1,746,073	+				+1.1
1,746,074	-				+0.3
1,746,074	-				+0.4
1,746,077	+				-0.5
1,746,077	+				+0.6
1,746,077	+				+1.0
1,746,082	+				+0.0
1,746,082	+				+0.6
1,746,082	+				+1.2
1,746,083	-				-0.9