Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS07590

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,686,377	-				-0.1
1,686,492	+		HER17_RS07585	0.32	-1.3
1,686,502	-		HER17_RS07585	0.35	-0.1
1,686,573	+		HER17_RS07585	0.52	-0.1
1,686,641	+		HER17_RS07585	0.68	-0.2
1,686,708	+		HER17_RS07585	0.85	+0.0
1,686,778	+				-0.6
1,686,781	+				-1.0
1,686,786	-				+0.4
1,686,786	-				-0.3
1,686,819	-				-0.3
1,686,931	-				+0.0
1,687,005	-				-1.0
1,687,040	-				+0.3
1,687,307	-		HER17_RS07590	0.42	-0.1
1,687,430	-		HER17_RS07590	0.58	+0.0
1,687,572	+		HER17_RS07590	0.76	+1.2
1,687,572	+		HER17_RS07590	0.76	-0.6
1,687,575	+		HER17_RS07590	0.76	-1.0
1,687,662	+		HER17_RS07590	0.87	-0.0
1,687,670	-		HER17_RS07590	0.88	+0.7
1,687,732	+				+1.2
1,687,770	-				-0.8
1,687,793	-				+0.9
1,687,807	-				-0.3
1,687,807	-				+0.3
1,687,817	-				-0.4
1,687,836	+				+0.3
1,687,891	-				-0.9
1,687,893	+				+0.2
1,687,894	-				+0.0
1,688,010	+				-1.2
1,688,011	-				+0.1
1,688,011	-				+0.4
1,688,027	-				+0.5
1,688,027	-				+0.1
1,688,062	+				+1.1
1,688,062	+				-0.7
1,688,063	-				+0.6
1,688,063	-				+0.9
1,688,063	-				+0.2
1,688,063	-				-0.0
1,688,063	-				+0.1
1,688,066	+				+0.0
1,688,066	+				+0.6
1,688,066	+				-0.3
1,688,066	+				-0.0
1,688,066	+				+0.3
1,688,067	-				-0.2
1,688,067	-				-0.6
1,688,067	-				+0.7
1,688,067	-				+0.5
1,688,067	-				+0.7
1,688,071	+				+0.1
1,688,071	+				-1.3
1,688,075	-				-0.2
1,688,075	-				+0.1
1,688,078	-				-0.3
1,688,499	+		HER17_RS07595	0.71	-0.4
1,688,499	+		HER17_RS07595	0.71	-0.1
1,688,503	+		HER17_RS07595	0.72	+0.1
1,688,503	+		HER17_RS07595	0.72	-0.8
1,688,504	-		HER17_RS07595	0.73	+0.1
1,688,563	+				+0.4
1,688,569	+				+0.3
1,688,753	+		HER17_RS07600	0.36	-0.0
1,688,753	+		HER17_RS07600	0.36	+0.2