Strain Fitness in Pectobacterium carotovorum WPP14 around HER17_RS07555

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,679,306	-		HER17_RS07550	0.71	+0.1
1,679,536	-				+0.4
1,679,536	-				-0.3
1,679,551	-				+0.0
1,679,637	-				-0.7
1,679,708	+				+0.9
1,679,708	+				+0.1
1,679,708	+				+0.4
1,679,708	+				+0.3
1,679,709	-				+0.0
1,679,709	-				-0.0
1,679,709	-				-0.6
1,679,717	+				+0.5
1,679,718	-				+0.1
1,679,718	-				-0.7
1,679,718	-				+0.5
1,679,751	-				+0.2
1,679,776	+				+0.5
1,679,776	+				+0.0
1,679,777	-				-0.3
1,679,819	-				-0.2
1,679,819	-				-1.3
1,679,862	+				-2.5
1,679,863	-				+0.7
1,679,863	-				+0.1
1,679,863	-				+0.0
1,680,059	+				+0.2
1,680,128	+				-0.1
1,680,135	-				-0.3
1,680,140	+				+0.8
1,680,176	-				-0.8
1,680,180	+				+0.1
1,680,211	-				-0.6
1,680,336	+				+0.4
1,680,341	-				+0.9
1,680,351	-				-0.6
1,680,370	-				-0.2
1,680,370	-				-0.5
1,680,509	+		HER17_RS07555	0.26	-0.0
1,680,509	+		HER17_RS07555	0.26	+0.4
1,680,510	-		HER17_RS07555	0.26	-0.7
1,680,510	-		HER17_RS07555	0.26	+0.3
1,680,510	-		HER17_RS07555	0.26	+0.6
1,680,529	-		HER17_RS07555	0.28	+0.3
1,680,529	-		HER17_RS07555	0.28	-0.3
1,680,532	+		HER17_RS07555	0.28	+0.4
1,680,533	-		HER17_RS07555	0.28	-0.8
1,680,533	-		HER17_RS07555	0.28	+0.8
1,680,562	+		HER17_RS07555	0.32	+0.2
1,680,564	+		HER17_RS07555	0.32	+0.4
1,680,597	+		HER17_RS07555	0.36	-0.2
1,680,597	+		HER17_RS07555	0.36	+0.4
1,680,597	+		HER17_RS07555	0.36	+0.4
1,680,598	-		HER17_RS07555	0.36	-0.8
1,680,598	-		HER17_RS07555	0.36	+1.0
1,680,673	+		HER17_RS07555	0.45	-0.0
1,680,693	+		HER17_RS07555	0.47	+0.1
1,680,872	+		HER17_RS07555	0.68	-0.4
1,680,873	-		HER17_RS07555	0.68	-0.0
1,680,873	-		HER17_RS07555	0.68	-0.1
1,680,897	+		HER17_RS07555	0.71	-0.4
1,680,898	-		HER17_RS07555	0.71	+0.6
1,681,006	-		HER17_RS07555	0.84	-0.9
1,681,032	+		HER17_RS07555	0.87	+0.5
1,681,120	+				+0.0
1,681,229	-				+0.2
1,681,854	-		HER17_RS07565	0.12	+0.7
1,681,950	+		HER17_RS07565	0.20	-1.2
1,681,973	+		HER17_RS07565	0.22	+0.7