Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HER17_RS00860 and HER17_RS00865 are separated by 88 nucleotides HER17_RS00865 and HER17_RS00870 are separated by 308 nucleotides
HER17_RS00860: HER17_RS00860 - cell division protein FtsN, at 199,539 to 200,414
_RS00860
HER17_RS00865: HER17_RS00865 - DNA-binding transcriptional regulator CytR, at 200,503 to 201,546
_RS00865
HER17_RS00870: HER17_RS00870 - primosomal protein N', at 201,855 to 204,053
_RS00870
Position (kb) 200
201
202 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 199.512 kb on + strand at 199.514 kb on + strand at 199.514 kb on + strand at 199.514 kb on + strand at 199.514 kb on + strand at 199.515 kb on - strand at 199.515 kb on - strand at 199.515 kb on - strand at 199.515 kb on - strand at 199.515 kb on - strand at 199.515 kb on - strand at 199.515 kb on - strand at 199.562 kb on + strand at 199.563 kb on - strand at 199.604 kb on + strand at 199.604 kb on + strand at 199.605 kb on - strand at 199.625 kb on + strand at 199.627 kb on + strand, within HER17_RS00860 at 199.628 kb on - strand, within HER17_RS00860 at 199.628 kb on - strand, within HER17_RS00860 at 199.628 kb on - strand, within HER17_RS00860 at 199.640 kb on + strand, within HER17_RS00860 at 199.640 kb on + strand, within HER17_RS00860 at 199.640 kb on + strand, within HER17_RS00860 at 199.640 kb on + strand, within HER17_RS00860 at 199.641 kb on - strand, within HER17_RS00860 at 199.641 kb on - strand, within HER17_RS00860 at 199.641 kb on - strand, within HER17_RS00860 at 199.644 kb on - strand, within HER17_RS00860 at 199.861 kb on - strand, within HER17_RS00860 at 199.953 kb on - strand, within HER17_RS00860 at 199.953 kb on - strand, within HER17_RS00860 at 199.992 kb on - strand, within HER17_RS00860 at 199.993 kb on + strand, within HER17_RS00860 at 199.994 kb on - strand, within HER17_RS00860 at 200.030 kb on + strand, within HER17_RS00860 at 200.399 kb on - strand at 200.399 kb on - strand at 200.437 kb on - strand at 200.441 kb on - strand at 200.441 kb on - strand at 200.441 kb on - strand at 200.445 kb on - strand at 200.445 kb on - strand at 200.447 kb on + strand at 200.447 kb on + strand at 200.449 kb on + strand at 200.449 kb on + strand at 200.449 kb on + strand at 200.449 kb on + strand at 200.449 kb on + strand at 200.450 kb on - strand at 200.450 kb on - strand at 200.450 kb on - strand at 200.450 kb on - strand at 200.481 kb on + strand at 200.482 kb on - strand at 200.504 kb on + strand at 200.504 kb on + strand at 200.505 kb on - strand at 200.522 kb on + strand at 200.523 kb on - strand at 200.523 kb on - strand at 200.548 kb on + strand at 200.549 kb on - strand at 200.549 kb on - strand at 200.596 kb on - strand at 200.612 kb on - strand, within HER17_RS00865 at 200.612 kb on - strand, within HER17_RS00865 at 200.612 kb on - strand, within HER17_RS00865 at 200.617 kb on + strand, within HER17_RS00865 at 200.617 kb on + strand, within HER17_RS00865 at 200.617 kb on + strand, within HER17_RS00865 at 200.618 kb on - strand, within HER17_RS00865 at 200.618 kb on - strand, within HER17_RS00865 at 200.791 kb on - strand, within HER17_RS00865 at 200.861 kb on + strand, within HER17_RS00865 at 200.861 kb on + strand, within HER17_RS00865 at 200.885 kb on + strand, within HER17_RS00865 at 200.885 kb on + strand, within HER17_RS00865 at 200.886 kb on - strand, within HER17_RS00865 at 200.930 kb on + strand, within HER17_RS00865 at 200.945 kb on + strand, within HER17_RS00865 at 201.009 kb on - strand, within HER17_RS00865 at 201.014 kb on + strand, within HER17_RS00865 at 201.014 kb on + strand, within HER17_RS00865 at 201.014 kb on + strand, within HER17_RS00865 at 201.014 kb on + strand, within HER17_RS00865 at 201.014 kb on + strand, within HER17_RS00865 at 201.014 kb on + strand, within HER17_RS00865 at 201.014 kb on + strand, within HER17_RS00865 at 201.014 kb on + strand, within HER17_RS00865 at 201.015 kb on - strand, within HER17_RS00865 at 201.015 kb on - strand, within HER17_RS00865 at 201.015 kb on - strand, within HER17_RS00865 at 201.015 kb on - strand, within HER17_RS00865 at 201.015 kb on - strand, within HER17_RS00865 at 201.015 kb on - strand, within HER17_RS00865 at 201.015 kb on - strand, within HER17_RS00865 at 201.015 kb on - strand, within HER17_RS00865 at 201.015 kb on - strand, within HER17_RS00865 at 201.019 kb on + strand, within HER17_RS00865 at 201.020 kb on - strand, within HER17_RS00865 at 201.020 kb on - strand, within HER17_RS00865 at 201.114 kb on + strand, within HER17_RS00865 at 201.115 kb on - strand, within HER17_RS00865 at 201.115 kb on - strand, within HER17_RS00865 at 201.160 kb on + strand, within HER17_RS00865 at 201.161 kb on - strand, within HER17_RS00865 at 201.186 kb on + strand, within HER17_RS00865 at 201.186 kb on + strand, within HER17_RS00865 at 201.190 kb on - strand, within HER17_RS00865 at 201.190 kb on - strand, within HER17_RS00865 at 201.305 kb on + strand, within HER17_RS00865 at 201.306 kb on - strand, within HER17_RS00865 at 201.390 kb on - strand, within HER17_RS00865 at 201.424 kb on - strand, within HER17_RS00865 at 201.424 kb on - strand, within HER17_RS00865 at 201.470 kb on - strand at 201.571 kb on - strand at 201.571 kb on - strand at 201.571 kb on - strand at 201.616 kb on + strand at 201.617 kb on - strand at 201.617 kb on - strand at 201.622 kb on + strand at 201.668 kb on + strand at 201.668 kb on + strand at 201.668 kb on + strand at 201.668 kb on + strand at 201.669 kb on - strand at 201.669 kb on - strand at 201.669 kb on - strand at 201.669 kb on - strand at 201.669 kb on - strand at 201.669 kb on - strand at 201.669 kb on - strand at 201.676 kb on + strand at 201.676 kb on + strand at 201.676 kb on + strand at 201.677 kb on - strand at 201.677 kb on - strand at 201.690 kb on + strand at 201.691 kb on - strand at 201.691 kb on - strand at 201.691 kb on - strand at 201.691 kb on - strand at 201.714 kb on + strand at 201.715 kb on - strand at 201.736 kb on - strand at 201.843 kb on + strand at 201.843 kb on + strand at 201.843 kb on + strand at 201.844 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 199,512 + -1.1 199,514 + +0.1 199,514 + +0.1 199,514 + -1.1 199,514 + -0.1 199,515 - -0.3 199,515 - -0.1 199,515 - +0.3 199,515 - +0.3 199,515 - -1.2 199,515 - +0.5 199,515 - -0.7 199,562 + +0.6 199,563 - -0.5 199,604 + -0.0 199,604 + -0.2 199,605 - +0.2 199,625 + -0.5 199,627 + HER17_RS00860 0.10 +0.2 199,628 - HER17_RS00860 0.10 -0.5 199,628 - HER17_RS00860 0.10 +0.4 199,628 - HER17_RS00860 0.10 -0.1 199,640 + HER17_RS00860 0.12 -0.6 199,640 + HER17_RS00860 0.12 +0.4 199,640 + HER17_RS00860 0.12 -0.4 199,640 + HER17_RS00860 0.12 +0.7 199,641 - HER17_RS00860 0.12 -0.9 199,641 - HER17_RS00860 0.12 +0.6 199,641 - HER17_RS00860 0.12 -0.1 199,644 - HER17_RS00860 0.12 +0.3 199,861 - HER17_RS00860 0.37 +0.7 199,953 - HER17_RS00860 0.47 +0.0 199,953 - HER17_RS00860 0.47 -0.1 199,992 - HER17_RS00860 0.52 +0.5 199,993 + HER17_RS00860 0.52 -1.0 199,994 - HER17_RS00860 0.52 -1.5 200,030 + HER17_RS00860 0.56 -0.5 200,399 - -2.0 200,399 - -0.4 200,437 - -2.6 200,441 - -0.6 200,441 - +0.0 200,441 - -0.8 200,445 - -0.7 200,445 - +0.8 200,447 + -1.1 200,447 + -1.3 200,449 + -2.8 200,449 + -1.9 200,449 + -1.8 200,449 + -1.8 200,449 + -1.6 200,450 - +0.1 200,450 - +0.1 200,450 - -0.0 200,450 - +0.5 200,481 + -0.9 200,482 - -0.2 200,504 + -0.5 200,504 + -1.0 200,505 - +0.5 200,522 + -0.1 200,523 - -0.0 200,523 - +0.1 200,548 + +0.4 200,549 - +0.1 200,549 - +0.9 200,596 - +0.0 200,612 - HER17_RS00865 0.10 -0.0 200,612 - HER17_RS00865 0.10 -0.1 200,612 - HER17_RS00865 0.10 +0.3 200,617 + HER17_RS00865 0.11 +0.7 200,617 + HER17_RS00865 0.11 +0.4 200,617 + HER17_RS00865 0.11 +0.2 200,618 - HER17_RS00865 0.11 +0.6 200,618 - HER17_RS00865 0.11 -0.1 200,791 - HER17_RS00865 0.28 +0.2 200,861 + HER17_RS00865 0.34 +0.6 200,861 + HER17_RS00865 0.34 +0.6 200,885 + HER17_RS00865 0.37 -0.1 200,885 + HER17_RS00865 0.37 +0.1 200,886 - HER17_RS00865 0.37 +0.4 200,930 + HER17_RS00865 0.41 +0.9 200,945 + HER17_RS00865 0.42 +0.4 201,009 - HER17_RS00865 0.48 -0.0 201,014 + HER17_RS00865 0.49 +0.2 201,014 + HER17_RS00865 0.49 -0.1 201,014 + HER17_RS00865 0.49 +0.1 201,014 + HER17_RS00865 0.49 -1.9 201,014 + HER17_RS00865 0.49 +0.9 201,014 + HER17_RS00865 0.49 +0.2 201,014 + HER17_RS00865 0.49 -0.4 201,014 + HER17_RS00865 0.49 +0.5 201,015 - HER17_RS00865 0.49 -0.6 201,015 - HER17_RS00865 0.49 +0.9 201,015 - HER17_RS00865 0.49 +0.2 201,015 - HER17_RS00865 0.49 -0.2 201,015 - HER17_RS00865 0.49 -0.2 201,015 - HER17_RS00865 0.49 +0.4 201,015 - HER17_RS00865 0.49 +0.3 201,015 - HER17_RS00865 0.49 -0.3 201,015 - HER17_RS00865 0.49 -1.1 201,019 + HER17_RS00865 0.49 -0.3 201,020 - HER17_RS00865 0.50 +0.5 201,020 - HER17_RS00865 0.50 -0.1 201,114 + HER17_RS00865 0.59 +0.2 201,115 - HER17_RS00865 0.59 +0.6 201,115 - HER17_RS00865 0.59 -2.0 201,160 + HER17_RS00865 0.63 +0.1 201,161 - HER17_RS00865 0.63 -0.3 201,186 + HER17_RS00865 0.65 +1.2 201,186 + HER17_RS00865 0.65 +0.1 201,190 - HER17_RS00865 0.66 +0.1 201,190 - HER17_RS00865 0.66 -0.1 201,305 + HER17_RS00865 0.77 +1.4 201,306 - HER17_RS00865 0.77 -0.2 201,390 - HER17_RS00865 0.85 -1.0 201,424 - HER17_RS00865 0.88 +0.1 201,424 - HER17_RS00865 0.88 -0.5 201,470 - +0.0 201,571 - +1.2 201,571 - -0.4 201,571 - +0.7 201,616 + -0.3 201,617 - +0.2 201,617 - -0.1 201,622 + -0.2 201,668 + -0.9 201,668 + +0.7 201,668 + +0.1 201,668 + -0.9 201,669 - -0.4 201,669 - -0.8 201,669 - +0.3 201,669 - +0.2 201,669 - +0.4 201,669 - -0.5 201,669 - +0.2 201,676 + +0.3 201,676 + -0.3 201,676 + +0.7 201,677 - +0.6 201,677 - -0.7 201,690 + +0.2 201,691 - -0.0 201,691 - -1.2 201,691 - +0.0 201,691 - +0.3 201,714 + -0.6 201,715 - -0.3 201,736 - +0.9 201,843 + +0.1 201,843 + -0.0 201,843 + -1.2 201,844 - -0.0
Or see this region's nucleotide sequence