Experiment: Tailocin 264
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03674 and ECD_t00067 are separated by 102 nucleotides ECD_t00067 and ECD_t00068 are separated by 58 nucleotides ECD_t00068 and ECD_t00069 are separated by 20 nucleotides ECD_t00069 and ECD_t00070 are separated by 42 nucleotides ECD_t00070 and ECD_03675 are separated by 146 nucleotides
ECD_03674: ECD_03674 - putative APC family amino acid transporter, at 3,871,127 to 3,872,512
_03674
ECD_t00067: ECD_t00067 - tRNA-Arg, at 3,872,615 to 3,872,691
_t00067
ECD_t00068: ECD_t00068 - tRNA-His, at 3,872,750 to 3,872,825
_t00068
ECD_t00069: ECD_t00069 - tRNA-Leu, at 3,872,846 to 3,872,932
_t00069
ECD_t00070: ECD_t00070 - tRNA-Pro, at 3,872,975 to 3,873,051
_t00070
ECD_03675: ECD_03675 - putative AslA-specific sulfatase-maturating enzyme, at 3,873,198 to 3,874,433
_03675
Position (kb)
3872
3873 Strain fitness (log2 ratio)
-2
-1
0
1 at 3871.682 kb on - strand, within ECD_03674 at 3871.747 kb on + strand, within ECD_03674 at 3871.747 kb on + strand, within ECD_03674 at 3871.748 kb on - strand, within ECD_03674 at 3871.748 kb on - strand, within ECD_03674 at 3871.763 kb on + strand, within ECD_03674 at 3871.789 kb on + strand, within ECD_03674 at 3871.837 kb on - strand, within ECD_03674 at 3871.869 kb on - strand, within ECD_03674 at 3871.872 kb on + strand, within ECD_03674 at 3871.872 kb on + strand, within ECD_03674 at 3871.873 kb on - strand, within ECD_03674 at 3871.873 kb on - strand, within ECD_03674 at 3871.917 kb on + strand, within ECD_03674 at 3871.918 kb on - strand, within ECD_03674 at 3871.918 kb on - strand, within ECD_03674 at 3872.036 kb on + strand, within ECD_03674 at 3872.036 kb on + strand, within ECD_03674 at 3872.036 kb on + strand, within ECD_03674 at 3872.036 kb on + strand, within ECD_03674 at 3872.036 kb on + strand, within ECD_03674 at 3872.036 kb on + strand, within ECD_03674 at 3872.036 kb on + strand, within ECD_03674 at 3872.036 kb on + strand, within ECD_03674 at 3872.037 kb on - strand, within ECD_03674 at 3872.037 kb on - strand, within ECD_03674 at 3872.037 kb on - strand, within ECD_03674 at 3872.037 kb on - strand, within ECD_03674 at 3872.050 kb on + strand, within ECD_03674 at 3872.050 kb on + strand, within ECD_03674 at 3872.050 kb on + strand, within ECD_03674 at 3872.050 kb on + strand, within ECD_03674 at 3872.050 kb on + strand, within ECD_03674 at 3872.051 kb on - strand, within ECD_03674 at 3872.051 kb on - strand, within ECD_03674 at 3872.051 kb on - strand, within ECD_03674 at 3872.051 kb on - strand, within ECD_03674 at 3872.051 kb on - strand, within ECD_03674 at 3872.051 kb on - strand, within ECD_03674 at 3872.051 kb on - strand, within ECD_03674 at 3872.057 kb on + strand, within ECD_03674 at 3872.057 kb on + strand, within ECD_03674 at 3872.058 kb on - strand, within ECD_03674 at 3872.058 kb on - strand, within ECD_03674 at 3872.139 kb on + strand, within ECD_03674 at 3872.139 kb on + strand, within ECD_03674 at 3872.139 kb on + strand, within ECD_03674 at 3872.140 kb on - strand, within ECD_03674 at 3872.143 kb on + strand, within ECD_03674 at 3872.143 kb on + strand, within ECD_03674 at 3872.143 kb on + strand, within ECD_03674 at 3872.144 kb on - strand, within ECD_03674 at 3872.144 kb on - strand, within ECD_03674 at 3872.144 kb on - strand, within ECD_03674 at 3872.144 kb on - strand, within ECD_03674 at 3872.144 kb on - strand, within ECD_03674 at 3872.144 kb on - strand, within ECD_03674 at 3872.150 kb on - strand, within ECD_03674 at 3872.150 kb on - strand, within ECD_03674 at 3872.177 kb on + strand, within ECD_03674 at 3872.177 kb on + strand, within ECD_03674 at 3872.178 kb on - strand, within ECD_03674 at 3872.178 kb on - strand, within ECD_03674 at 3872.178 kb on - strand, within ECD_03674 at 3872.210 kb on + strand, within ECD_03674 at 3872.210 kb on + strand, within ECD_03674 at 3872.211 kb on - strand, within ECD_03674 at 3872.216 kb on + strand, within ECD_03674 at 3872.216 kb on + strand, within ECD_03674 at 3872.216 kb on + strand, within ECD_03674 at 3872.217 kb on - strand, within ECD_03674 at 3872.217 kb on - strand, within ECD_03674 at 3872.260 kb on - strand, within ECD_03674 at 3872.294 kb on - strand, within ECD_03674 at 3872.348 kb on + strand, within ECD_03674 at 3872.348 kb on + strand, within ECD_03674 at 3872.348 kb on + strand, within ECD_03674 at 3872.348 kb on + strand, within ECD_03674 at 3872.349 kb on - strand, within ECD_03674 at 3872.349 kb on - strand, within ECD_03674 at 3872.349 kb on - strand, within ECD_03674 at 3872.349 kb on - strand, within ECD_03674 at 3872.349 kb on - strand, within ECD_03674 at 3872.352 kb on + strand, within ECD_03674 at 3872.352 kb on + strand, within ECD_03674 at 3872.352 kb on + strand, within ECD_03674 at 3872.353 kb on - strand, within ECD_03674 at 3872.390 kb on + strand at 3872.390 kb on + strand at 3872.391 kb on - strand at 3872.391 kb on - strand at 3872.391 kb on - strand at 3872.391 kb on - strand at 3872.400 kb on + strand at 3872.404 kb on + strand at 3872.405 kb on - strand at 3872.410 kb on + strand at 3872.410 kb on + strand at 3872.411 kb on - strand at 3872.411 kb on - strand at 3872.411 kb on - strand at 3872.411 kb on - strand at 3872.411 kb on - strand at 3872.488 kb on + strand at 3872.497 kb on + strand at 3872.694 kb on + strand at 3872.723 kb on + strand at 3872.830 kb on + strand at 3872.830 kb on + strand at 3873.126 kb on + strand at 3873.129 kb on + strand at 3873.129 kb on + strand at 3873.147 kb on + strand at 3873.161 kb on + strand at 3873.162 kb on - strand at 3873.261 kb on - strand at 3873.277 kb on - strand at 3873.306 kb on + strand at 3873.307 kb on - strand at 3873.355 kb on - strand, within ECD_03675 at 3873.366 kb on + strand, within ECD_03675 at 3873.405 kb on - strand, within ECD_03675 at 3873.448 kb on - strand, within ECD_03675 at 3873.477 kb on + strand, within ECD_03675 at 3873.477 kb on + strand, within ECD_03675 at 3873.478 kb on - strand, within ECD_03675 at 3873.496 kb on + strand, within ECD_03675 at 3873.496 kb on + strand, within ECD_03675 at 3873.497 kb on - strand, within ECD_03675 at 3873.497 kb on - strand, within ECD_03675 at 3873.497 kb on - strand, within ECD_03675 at 3873.497 kb on - strand, within ECD_03675 at 3873.500 kb on + strand, within ECD_03675 at 3873.501 kb on - strand, within ECD_03675 at 3873.501 kb on - strand, within ECD_03675 at 3873.616 kb on - strand, within ECD_03675
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 264 remove 3,871,682 - ECD_03674 0.40 +0.0 3,871,747 + ECD_03674 0.45 +0.3 3,871,747 + ECD_03674 0.45 -0.1 3,871,748 - ECD_03674 0.45 +0.5 3,871,748 - ECD_03674 0.45 +0.4 3,871,763 + ECD_03674 0.46 +0.5 3,871,789 + ECD_03674 0.48 +0.5 3,871,837 - ECD_03674 0.51 -1.5 3,871,869 - ECD_03674 0.54 +0.5 3,871,872 + ECD_03674 0.54 +0.5 3,871,872 + ECD_03674 0.54 -0.0 3,871,873 - ECD_03674 0.54 -0.3 3,871,873 - ECD_03674 0.54 +1.3 3,871,917 + ECD_03674 0.57 +0.2 3,871,918 - ECD_03674 0.57 +0.3 3,871,918 - ECD_03674 0.57 -0.2 3,872,036 + ECD_03674 0.66 +0.1 3,872,036 + ECD_03674 0.66 +0.4 3,872,036 + ECD_03674 0.66 -0.6 3,872,036 + ECD_03674 0.66 +0.7 3,872,036 + ECD_03674 0.66 +0.5 3,872,036 + ECD_03674 0.66 -0.5 3,872,036 + ECD_03674 0.66 -0.1 3,872,036 + ECD_03674 0.66 +0.3 3,872,037 - ECD_03674 0.66 +0.3 3,872,037 - ECD_03674 0.66 -0.2 3,872,037 - ECD_03674 0.66 +0.4 3,872,037 - ECD_03674 0.66 -0.1 3,872,050 + ECD_03674 0.67 -1.1 3,872,050 + ECD_03674 0.67 +0.8 3,872,050 + ECD_03674 0.67 -0.6 3,872,050 + ECD_03674 0.67 +1.4 3,872,050 + ECD_03674 0.67 -1.4 3,872,051 - ECD_03674 0.67 +1.2 3,872,051 - ECD_03674 0.67 -0.6 3,872,051 - ECD_03674 0.67 +0.1 3,872,051 - ECD_03674 0.67 -0.0 3,872,051 - ECD_03674 0.67 +0.3 3,872,051 - ECD_03674 0.67 -0.3 3,872,051 - ECD_03674 0.67 +0.1 3,872,057 + ECD_03674 0.67 +0.6 3,872,057 + ECD_03674 0.67 +0.5 3,872,058 - ECD_03674 0.67 +0.3 3,872,058 - ECD_03674 0.67 +0.6 3,872,139 + ECD_03674 0.73 -0.1 3,872,139 + ECD_03674 0.73 +0.0 3,872,139 + ECD_03674 0.73 +0.4 3,872,140 - ECD_03674 0.73 +0.0 3,872,143 + ECD_03674 0.73 +0.6 3,872,143 + ECD_03674 0.73 +0.3 3,872,143 + ECD_03674 0.73 -0.2 3,872,144 - ECD_03674 0.73 -0.3 3,872,144 - ECD_03674 0.73 -0.9 3,872,144 - ECD_03674 0.73 +0.6 3,872,144 - ECD_03674 0.73 -0.6 3,872,144 - ECD_03674 0.73 -0.4 3,872,144 - ECD_03674 0.73 -0.1 3,872,150 - ECD_03674 0.74 +0.8 3,872,150 - ECD_03674 0.74 +0.1 3,872,177 + ECD_03674 0.76 -1.6 3,872,177 + ECD_03674 0.76 +0.7 3,872,178 - ECD_03674 0.76 -0.2 3,872,178 - ECD_03674 0.76 -0.1 3,872,178 - ECD_03674 0.76 -0.5 3,872,210 + ECD_03674 0.78 -0.0 3,872,210 + ECD_03674 0.78 +0.7 3,872,211 - ECD_03674 0.78 +0.3 3,872,216 + ECD_03674 0.79 -0.6 3,872,216 + ECD_03674 0.79 -0.2 3,872,216 + ECD_03674 0.79 -0.7 3,872,217 - ECD_03674 0.79 +0.2 3,872,217 - ECD_03674 0.79 +0.5 3,872,260 - ECD_03674 0.82 +0.1 3,872,294 - ECD_03674 0.84 +0.3 3,872,348 + ECD_03674 0.88 -0.6 3,872,348 + ECD_03674 0.88 -0.1 3,872,348 + ECD_03674 0.88 -0.4 3,872,348 + ECD_03674 0.88 +0.4 3,872,349 - ECD_03674 0.88 -0.7 3,872,349 - ECD_03674 0.88 -0.3 3,872,349 - ECD_03674 0.88 -0.0 3,872,349 - ECD_03674 0.88 +0.4 3,872,349 - ECD_03674 0.88 -1.0 3,872,352 + ECD_03674 0.88 +0.1 3,872,352 + ECD_03674 0.88 -0.1 3,872,352 + ECD_03674 0.88 +1.3 3,872,353 - ECD_03674 0.88 -0.2 3,872,390 + +0.6 3,872,390 + +0.5 3,872,391 - +0.5 3,872,391 - -0.1 3,872,391 - +1.7 3,872,391 - +0.8 3,872,400 + -0.3 3,872,404 + -0.3 3,872,405 - -1.0 3,872,410 + -0.4 3,872,410 + -0.9 3,872,411 - +0.2 3,872,411 - -0.7 3,872,411 - +0.6 3,872,411 - -0.2 3,872,411 - -0.5 3,872,488 + -0.3 3,872,497 + +0.2 3,872,694 + -1.2 3,872,723 + -2.3 3,872,830 + +0.3 3,872,830 + -1.6 3,873,126 + -0.0 3,873,129 + -0.5 3,873,129 + +0.2 3,873,147 + +0.0 3,873,161 + -1.3 3,873,162 - +0.1 3,873,261 - +0.1 3,873,277 - +0.1 3,873,306 + +0.8 3,873,307 - +0.1 3,873,355 - ECD_03675 0.13 +0.1 3,873,366 + ECD_03675 0.14 +0.1 3,873,405 - ECD_03675 0.17 -0.4 3,873,448 - ECD_03675 0.20 +1.4 3,873,477 + ECD_03675 0.23 -0.0 3,873,477 + ECD_03675 0.23 -0.8 3,873,478 - ECD_03675 0.23 +0.4 3,873,496 + ECD_03675 0.24 +0.0 3,873,496 + ECD_03675 0.24 -0.8 3,873,497 - ECD_03675 0.24 +0.9 3,873,497 - ECD_03675 0.24 +0.7 3,873,497 - ECD_03675 0.24 +0.0 3,873,497 - ECD_03675 0.24 +0.2 3,873,500 + ECD_03675 0.24 -0.5 3,873,501 - ECD_03675 0.25 +0.0 3,873,501 - ECD_03675 0.25 -0.1 3,873,616 - ECD_03675 0.34 +0.3
Or see this region's nucleotide sequence