Experiment: Tailocin 264
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03983 and ECD_03984 are separated by 9 nucleotides ECD_03984 and ECD_03985 overlap by 4 nucleotides ECD_03985 and ECD_03986 are separated by 103 nucleotides
ECD_03983: ECD_03983 - sensory histidine kinase in two-component regulatory system with BasR, at 4,239,260 to 4,240,351
_03983
ECD_03984: ECD_03984 - response regulator in two-component regulatory system with BasS, at 4,240,361 to 4,241,029
_03984
ECD_03985: ECD_03985 - lipid A phosphoethanolamine transferase, at 4,241,026 to 4,242,669
_03985
ECD_03986: ECD_03986 - arginine:agmatine antiporter, at 4,242,773 to 4,244,110
_03986
Position (kb)
4241
4242
4243 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 4240.109 kb on + strand, within ECD_03983 at 4240.241 kb on - strand, within ECD_03983 at 4240.387 kb on + strand at 4240.387 kb on + strand at 4240.387 kb on + strand at 4240.388 kb on - strand at 4240.388 kb on - strand at 4240.388 kb on - strand at 4240.388 kb on - strand at 4240.388 kb on - strand at 4240.388 kb on - strand at 4240.388 kb on - strand at 4240.388 kb on - strand at 4240.389 kb on + strand at 4240.390 kb on - strand at 4240.493 kb on - strand, within ECD_03984 at 4240.494 kb on + strand, within ECD_03984 at 4240.494 kb on + strand, within ECD_03984 at 4240.494 kb on + strand, within ECD_03984 at 4240.494 kb on + strand, within ECD_03984 at 4240.494 kb on + strand, within ECD_03984 at 4240.494 kb on + strand, within ECD_03984 at 4240.494 kb on + strand, within ECD_03984 at 4240.495 kb on - strand, within ECD_03984 at 4240.495 kb on - strand, within ECD_03984 at 4240.495 kb on - strand, within ECD_03984 at 4240.495 kb on - strand, within ECD_03984 at 4240.495 kb on - strand, within ECD_03984 at 4240.495 kb on - strand, within ECD_03984 at 4240.495 kb on - strand, within ECD_03984 at 4240.495 kb on - strand, within ECD_03984 at 4240.495 kb on - strand, within ECD_03984 at 4240.567 kb on - strand, within ECD_03984 at 4240.567 kb on - strand, within ECD_03984 at 4240.607 kb on + strand, within ECD_03984 at 4240.608 kb on - strand, within ECD_03984 at 4240.624 kb on + strand, within ECD_03984 at 4240.670 kb on - strand, within ECD_03984 at 4240.738 kb on - strand, within ECD_03984 at 4240.819 kb on - strand, within ECD_03984 at 4241.058 kb on + strand at 4241.059 kb on - strand at 4241.079 kb on - strand at 4241.079 kb on - strand at 4241.099 kb on - strand at 4241.120 kb on - strand at 4241.120 kb on - strand at 4241.255 kb on + strand, within ECD_03985 at 4241.255 kb on + strand, within ECD_03985 at 4241.273 kb on + strand, within ECD_03985 at 4241.273 kb on + strand, within ECD_03985 at 4241.273 kb on + strand, within ECD_03985 at 4241.274 kb on - strand, within ECD_03985 at 4241.274 kb on - strand, within ECD_03985 at 4241.290 kb on + strand, within ECD_03985 at 4241.379 kb on + strand, within ECD_03985 at 4241.380 kb on - strand, within ECD_03985 at 4241.380 kb on - strand, within ECD_03985 at 4241.382 kb on - strand, within ECD_03985 at 4241.409 kb on - strand, within ECD_03985 at 4241.501 kb on + strand, within ECD_03985 at 4241.502 kb on - strand, within ECD_03985 at 4241.533 kb on + strand, within ECD_03985 at 4241.533 kb on + strand, within ECD_03985 at 4241.534 kb on - strand, within ECD_03985 at 4241.534 kb on - strand, within ECD_03985 at 4241.534 kb on - strand, within ECD_03985 at 4241.570 kb on + strand, within ECD_03985 at 4241.571 kb on - strand, within ECD_03985 at 4241.593 kb on + strand, within ECD_03985 at 4241.594 kb on - strand, within ECD_03985 at 4241.594 kb on - strand, within ECD_03985 at 4241.594 kb on - strand, within ECD_03985 at 4241.604 kb on - strand, within ECD_03985 at 4241.683 kb on - strand, within ECD_03985 at 4241.683 kb on - strand, within ECD_03985 at 4241.778 kb on - strand, within ECD_03985 at 4241.794 kb on - strand, within ECD_03985 at 4241.794 kb on - strand, within ECD_03985 at 4241.859 kb on - strand, within ECD_03985 at 4241.889 kb on + strand, within ECD_03985 at 4242.054 kb on - strand, within ECD_03985 at 4242.092 kb on - strand, within ECD_03985 at 4242.114 kb on + strand, within ECD_03985 at 4242.134 kb on + strand, within ECD_03985 at 4242.134 kb on + strand, within ECD_03985 at 4242.135 kb on - strand, within ECD_03985 at 4242.173 kb on - strand, within ECD_03985 at 4242.176 kb on - strand, within ECD_03985 at 4242.176 kb on - strand, within ECD_03985 at 4242.340 kb on - strand, within ECD_03985 at 4242.340 kb on - strand, within ECD_03985 at 4242.345 kb on + strand, within ECD_03985 at 4242.384 kb on - strand, within ECD_03985 at 4242.392 kb on - strand, within ECD_03985 at 4242.448 kb on - strand, within ECD_03985 at 4242.448 kb on - strand, within ECD_03985 at 4242.455 kb on - strand, within ECD_03985 at 4242.467 kb on - strand, within ECD_03985 at 4242.467 kb on - strand, within ECD_03985 at 4242.480 kb on + strand, within ECD_03985 at 4242.481 kb on - strand, within ECD_03985 at 4242.483 kb on + strand, within ECD_03985 at 4242.527 kb on - strand at 4242.595 kb on - strand at 4242.595 kb on - strand at 4242.595 kb on - strand at 4242.602 kb on + strand at 4242.603 kb on - strand at 4242.603 kb on - strand at 4242.632 kb on - strand at 4242.751 kb on - strand at 4242.814 kb on + strand at 4242.815 kb on - strand at 4242.840 kb on + strand at 4242.840 kb on + strand at 4242.840 kb on + strand at 4242.840 kb on + strand at 4242.840 kb on + strand at 4242.841 kb on - strand at 4242.841 kb on - strand at 4242.841 kb on - strand at 4242.841 kb on - strand at 4242.880 kb on + strand at 4242.881 kb on - strand at 4242.881 kb on - strand at 4242.881 kb on - strand at 4242.881 kb on - strand at 4242.922 kb on - strand, within ECD_03986 at 4242.937 kb on + strand, within ECD_03986 at 4242.937 kb on + strand, within ECD_03986 at 4242.941 kb on - strand, within ECD_03986 at 4242.941 kb on - strand, within ECD_03986 at 4242.951 kb on + strand, within ECD_03986 at 4242.968 kb on - strand, within ECD_03986 at 4242.995 kb on + strand, within ECD_03986 at 4243.012 kb on - strand, within ECD_03986 at 4243.012 kb on - strand, within ECD_03986 at 4243.017 kb on + strand, within ECD_03986 at 4243.018 kb on - strand, within ECD_03986 at 4243.031 kb on - strand, within ECD_03986 at 4243.250 kb on + strand, within ECD_03986 at 4243.251 kb on - strand, within ECD_03986 at 4243.384 kb on + strand, within ECD_03986 at 4243.391 kb on + strand, within ECD_03986 at 4243.391 kb on + strand, within ECD_03986 at 4243.391 kb on + strand, within ECD_03986 at 4243.391 kb on + strand, within ECD_03986 at 4243.391 kb on + strand, within ECD_03986 at 4243.391 kb on + strand, within ECD_03986 at 4243.392 kb on - strand, within ECD_03986 at 4243.395 kb on + strand, within ECD_03986 at 4243.395 kb on + strand, within ECD_03986 at 4243.396 kb on - strand, within ECD_03986 at 4243.396 kb on - strand, within ECD_03986 at 4243.396 kb on - strand, within ECD_03986 at 4243.416 kb on - strand, within ECD_03986 at 4243.416 kb on - strand, within ECD_03986 at 4243.525 kb on + strand, within ECD_03986 at 4243.525 kb on + strand, within ECD_03986 at 4243.576 kb on + strand, within ECD_03986 at 4243.578 kb on + strand, within ECD_03986 at 4243.578 kb on + strand, within ECD_03986 at 4243.579 kb on - strand, within ECD_03986 at 4243.579 kb on - strand, within ECD_03986 at 4243.579 kb on - strand, within ECD_03986 at 4243.579 kb on - strand, within ECD_03986 at 4243.579 kb on - strand, within ECD_03986 at 4243.579 kb on - strand, within ECD_03986 at 4243.610 kb on + strand, within ECD_03986
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 264 remove 4,240,109 + ECD_03983 0.78 -5.1 4,240,241 - ECD_03983 0.90 -3.9 4,240,387 + -4.9 4,240,387 + -4.0 4,240,387 + -4.0 4,240,388 - -5.6 4,240,388 - -5.4 4,240,388 - -4.4 4,240,388 - -7.6 4,240,388 - -6.1 4,240,388 - -6.9 4,240,388 - -6.1 4,240,388 - -6.8 4,240,389 + -4.6 4,240,390 - -6.0 4,240,493 - ECD_03984 0.20 -3.4 4,240,494 + ECD_03984 0.20 -5.4 4,240,494 + ECD_03984 0.20 -4.1 4,240,494 + ECD_03984 0.20 -6.6 4,240,494 + ECD_03984 0.20 -5.0 4,240,494 + ECD_03984 0.20 -5.2 4,240,494 + ECD_03984 0.20 -4.7 4,240,494 + ECD_03984 0.20 -5.0 4,240,495 - ECD_03984 0.20 -5.1 4,240,495 - ECD_03984 0.20 -4.2 4,240,495 - ECD_03984 0.20 -6.0 4,240,495 - ECD_03984 0.20 -2.0 4,240,495 - ECD_03984 0.20 -4.3 4,240,495 - ECD_03984 0.20 -5.3 4,240,495 - ECD_03984 0.20 -4.9 4,240,495 - ECD_03984 0.20 -4.9 4,240,495 - ECD_03984 0.20 -3.2 4,240,567 - ECD_03984 0.31 -7.2 4,240,567 - ECD_03984 0.31 -2.3 4,240,607 + ECD_03984 0.37 -2.4 4,240,608 - ECD_03984 0.37 -4.5 4,240,624 + ECD_03984 0.39 -5.9 4,240,670 - ECD_03984 0.46 -5.7 4,240,738 - ECD_03984 0.56 -3.9 4,240,819 - ECD_03984 0.68 -2.5 4,241,058 + -4.4 4,241,059 - -0.4 4,241,079 - +0.3 4,241,079 - +0.4 4,241,099 - -0.2 4,241,120 - +0.3 4,241,120 - -0.4 4,241,255 + ECD_03985 0.14 -0.7 4,241,255 + ECD_03985 0.14 -3.6 4,241,273 + ECD_03985 0.15 -3.0 4,241,273 + ECD_03985 0.15 -3.6 4,241,273 + ECD_03985 0.15 -3.6 4,241,274 - ECD_03985 0.15 +0.3 4,241,274 - ECD_03985 0.15 -0.4 4,241,290 + ECD_03985 0.16 -2.5 4,241,379 + ECD_03985 0.21 -2.4 4,241,380 - ECD_03985 0.22 -0.1 4,241,380 - ECD_03985 0.22 -0.1 4,241,382 - ECD_03985 0.22 -0.2 4,241,409 - ECD_03985 0.23 -0.2 4,241,501 + ECD_03985 0.29 -3.1 4,241,502 - ECD_03985 0.29 -1.0 4,241,533 + ECD_03985 0.31 -2.0 4,241,533 + ECD_03985 0.31 -4.3 4,241,534 - ECD_03985 0.31 +0.0 4,241,534 - ECD_03985 0.31 -0.2 4,241,534 - ECD_03985 0.31 -0.2 4,241,570 + ECD_03985 0.33 -2.2 4,241,571 - ECD_03985 0.33 -0.4 4,241,593 + ECD_03985 0.34 -3.4 4,241,594 - ECD_03985 0.35 -1.0 4,241,594 - ECD_03985 0.35 +0.1 4,241,594 - ECD_03985 0.35 -2.0 4,241,604 - ECD_03985 0.35 +0.0 4,241,683 - ECD_03985 0.40 -0.1 4,241,683 - ECD_03985 0.40 +0.2 4,241,778 - ECD_03985 0.46 -0.2 4,241,794 - ECD_03985 0.47 +1.7 4,241,794 - ECD_03985 0.47 +0.2 4,241,859 - ECD_03985 0.51 -0.6 4,241,889 + ECD_03985 0.52 -4.9 4,242,054 - ECD_03985 0.63 -0.4 4,242,092 - ECD_03985 0.65 +0.1 4,242,114 + ECD_03985 0.66 -3.0 4,242,134 + ECD_03985 0.67 -3.8 4,242,134 + ECD_03985 0.67 -3.8 4,242,135 - ECD_03985 0.67 -0.5 4,242,173 - ECD_03985 0.70 -0.6 4,242,176 - ECD_03985 0.70 +0.9 4,242,176 - ECD_03985 0.70 -0.5 4,242,340 - ECD_03985 0.80 -0.7 4,242,340 - ECD_03985 0.80 +1.0 4,242,345 + ECD_03985 0.80 -2.8 4,242,384 - ECD_03985 0.83 -0.4 4,242,392 - ECD_03985 0.83 -0.7 4,242,448 - ECD_03985 0.86 -0.6 4,242,448 - ECD_03985 0.86 -0.4 4,242,455 - ECD_03985 0.87 -0.6 4,242,467 - ECD_03985 0.88 -0.8 4,242,467 - ECD_03985 0.88 -0.4 4,242,480 + ECD_03985 0.88 -2.8 4,242,481 - ECD_03985 0.89 -0.5 4,242,483 + ECD_03985 0.89 -0.9 4,242,527 - -0.2 4,242,595 - -0.6 4,242,595 - -0.8 4,242,595 - -2.1 4,242,602 + -1.2 4,242,603 - -0.7 4,242,603 - -0.7 4,242,632 - -1.0 4,242,751 - +0.0 4,242,814 + -0.3 4,242,815 - -0.4 4,242,840 + +0.2 4,242,840 + +0.2 4,242,840 + -0.6 4,242,840 + -0.2 4,242,840 + +0.2 4,242,841 - +0.9 4,242,841 - +0.1 4,242,841 - +0.2 4,242,841 - +0.2 4,242,880 + -0.2 4,242,881 - +0.5 4,242,881 - +0.6 4,242,881 - +0.2 4,242,881 - -0.5 4,242,922 - ECD_03986 0.11 +0.1 4,242,937 + ECD_03986 0.12 +0.0 4,242,937 + ECD_03986 0.12 -0.5 4,242,941 - ECD_03986 0.13 +0.2 4,242,941 - ECD_03986 0.13 +0.2 4,242,951 + ECD_03986 0.13 -0.4 4,242,968 - ECD_03986 0.15 +0.1 4,242,995 + ECD_03986 0.17 -0.8 4,243,012 - ECD_03986 0.18 +0.5 4,243,012 - ECD_03986 0.18 +0.2 4,243,017 + ECD_03986 0.18 -0.1 4,243,018 - ECD_03986 0.18 -0.2 4,243,031 - ECD_03986 0.19 +0.5 4,243,250 + ECD_03986 0.36 -0.0 4,243,251 - ECD_03986 0.36 +0.0 4,243,384 + ECD_03986 0.46 +0.1 4,243,391 + ECD_03986 0.46 -0.7 4,243,391 + ECD_03986 0.46 +0.0 4,243,391 + ECD_03986 0.46 -0.3 4,243,391 + ECD_03986 0.46 -0.2 4,243,391 + ECD_03986 0.46 -0.3 4,243,391 + ECD_03986 0.46 +0.0 4,243,392 - ECD_03986 0.46 +0.6 4,243,395 + ECD_03986 0.46 -0.3 4,243,395 + ECD_03986 0.46 -0.2 4,243,396 - ECD_03986 0.47 -0.3 4,243,396 - ECD_03986 0.47 +0.8 4,243,396 - ECD_03986 0.47 +0.4 4,243,416 - ECD_03986 0.48 -0.1 4,243,416 - ECD_03986 0.48 -0.2 4,243,525 + ECD_03986 0.56 -0.2 4,243,525 + ECD_03986 0.56 +0.9 4,243,576 + ECD_03986 0.60 -0.2 4,243,578 + ECD_03986 0.60 +0.7 4,243,578 + ECD_03986 0.60 -0.2 4,243,579 - ECD_03986 0.60 +0.6 4,243,579 - ECD_03986 0.60 -0.4 4,243,579 - ECD_03986 0.60 -0.2 4,243,579 - ECD_03986 0.60 +0.6 4,243,579 - ECD_03986 0.60 -0.4 4,243,579 - ECD_03986 0.60 -0.4 4,243,610 + ECD_03986 0.63 -0.1
Or see this region's nucleotide sequence