Experiment: Tailocin 264
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03836 and ECD_03837 overlap by 35 nucleotides ECD_03837 and ECD_03838 are separated by 1 nucleotides ECD_03838 and ECD_03839 overlap by 14 nucleotides
ECD_03836: ECD_03836 - putative glycine radical domain-containing pyruvate formate-lyase, at 4,052,542 to 4,054,839
_03836
ECD_03837: ECD_03837 - putative [formate-C-acetyltransferase 2]-activating enzyme; pyruvate formate-lyase 1-activating enzyme, at 4,054,805 to 4,055,683
_03837
ECD_03838: ECD_03838 - putative enzyme IIB component of PTS, at 4,055,685 to 4,056,026
_03838
ECD_03839: ECD_03839 - AraC family putative transcriptional activator, at 4,056,013 to 4,056,864
_03839
Position (kb)
4054
4055
4056 Strain fitness (log2 ratio)
-1
0
1 at 4053.806 kb on + strand, within ECD_03836 at 4053.806 kb on + strand, within ECD_03836 at 4053.807 kb on - strand, within ECD_03836 at 4053.913 kb on + strand, within ECD_03836 at 4053.913 kb on + strand, within ECD_03836 at 4053.913 kb on + strand, within ECD_03836 at 4053.914 kb on - strand, within ECD_03836 at 4053.914 kb on - strand, within ECD_03836 at 4053.914 kb on - strand, within ECD_03836 at 4053.955 kb on + strand, within ECD_03836 at 4053.955 kb on + strand, within ECD_03836 at 4053.955 kb on + strand, within ECD_03836 at 4053.955 kb on + strand, within ECD_03836 at 4053.956 kb on - strand, within ECD_03836 at 4053.956 kb on - strand, within ECD_03836 at 4053.984 kb on + strand, within ECD_03836 at 4054.039 kb on - strand, within ECD_03836 at 4054.071 kb on + strand, within ECD_03836 at 4054.092 kb on + strand, within ECD_03836 at 4054.092 kb on + strand, within ECD_03836 at 4054.092 kb on + strand, within ECD_03836 at 4054.093 kb on - strand, within ECD_03836 at 4054.209 kb on - strand, within ECD_03836 at 4054.256 kb on + strand, within ECD_03836 at 4054.276 kb on + strand, within ECD_03836 at 4054.276 kb on + strand, within ECD_03836 at 4054.390 kb on + strand, within ECD_03836 at 4054.390 kb on + strand, within ECD_03836 at 4054.488 kb on + strand, within ECD_03836 at 4054.488 kb on + strand, within ECD_03836 at 4054.488 kb on + strand, within ECD_03836 at 4054.488 kb on + strand, within ECD_03836 at 4054.488 kb on + strand, within ECD_03836 at 4054.662 kb on + strand at 4054.663 kb on - strand at 4054.663 kb on - strand at 4054.663 kb on - strand at 4054.663 kb on - strand at 4054.663 kb on - strand at 4054.667 kb on + strand at 4054.674 kb on + strand at 4054.674 kb on + strand at 4054.674 kb on + strand at 4054.674 kb on + strand at 4054.674 kb on + strand at 4054.674 kb on + strand at 4054.675 kb on - strand at 4054.675 kb on - strand at 4054.684 kb on - strand at 4054.837 kb on + strand at 4054.921 kb on + strand, within ECD_03837 at 4055.220 kb on + strand, within ECD_03837 at 4055.480 kb on - strand, within ECD_03837 at 4055.499 kb on + strand, within ECD_03837 at 4055.500 kb on - strand, within ECD_03837 at 4055.681 kb on + strand at 4055.682 kb on - strand at 4055.682 kb on - strand at 4055.691 kb on + strand at 4055.691 kb on + strand at 4055.732 kb on + strand, within ECD_03838 at 4055.732 kb on + strand, within ECD_03838 at 4055.732 kb on + strand, within ECD_03838 at 4055.733 kb on - strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.736 kb on + strand, within ECD_03838 at 4055.737 kb on - strand, within ECD_03838 at 4055.737 kb on - strand, within ECD_03838 at 4055.737 kb on - strand, within ECD_03838 at 4055.737 kb on - strand, within ECD_03838 at 4055.737 kb on - strand, within ECD_03838 at 4055.737 kb on - strand, within ECD_03838 at 4055.737 kb on - strand, within ECD_03838 at 4055.737 kb on - strand, within ECD_03838 at 4055.737 kb on - strand, within ECD_03838 at 4055.737 kb on - strand, within ECD_03838 at 4055.738 kb on + strand, within ECD_03838 at 4055.739 kb on - strand, within ECD_03838 at 4055.739 kb on - strand, within ECD_03838 at 4055.919 kb on + strand, within ECD_03838 at 4055.937 kb on + strand, within ECD_03838 at 4055.937 kb on + strand, within ECD_03838 at 4055.938 kb on - strand, within ECD_03838 at 4056.015 kb on - strand at 4056.094 kb on - strand at 4056.113 kb on + strand, within ECD_03839 at 4056.113 kb on + strand, within ECD_03839 at 4056.113 kb on + strand, within ECD_03839 at 4056.114 kb on - strand, within ECD_03839 at 4056.167 kb on + strand, within ECD_03839 at 4056.186 kb on + strand, within ECD_03839 at 4056.186 kb on + strand, within ECD_03839 at 4056.187 kb on - strand, within ECD_03839 at 4056.187 kb on - strand, within ECD_03839 at 4056.216 kb on - strand, within ECD_03839 at 4056.223 kb on - strand, within ECD_03839 at 4056.277 kb on - strand, within ECD_03839 at 4056.333 kb on + strand, within ECD_03839 at 4056.335 kb on + strand, within ECD_03839 at 4056.345 kb on + strand, within ECD_03839 at 4056.355 kb on + strand, within ECD_03839 at 4056.503 kb on - strand, within ECD_03839 at 4056.549 kb on - strand, within ECD_03839 at 4056.610 kb on - strand, within ECD_03839 at 4056.665 kb on + strand, within ECD_03839 at 4056.665 kb on + strand, within ECD_03839 at 4056.666 kb on - strand, within ECD_03839 at 4056.666 kb on - strand, within ECD_03839
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 264 remove 4,053,806 + ECD_03836 0.55 -0.0 4,053,806 + ECD_03836 0.55 -0.7 4,053,807 - ECD_03836 0.55 +0.4 4,053,913 + ECD_03836 0.60 -0.1 4,053,913 + ECD_03836 0.60 -0.3 4,053,913 + ECD_03836 0.60 +0.6 4,053,914 - ECD_03836 0.60 +0.1 4,053,914 - ECD_03836 0.60 +0.1 4,053,914 - ECD_03836 0.60 -0.4 4,053,955 + ECD_03836 0.61 +0.2 4,053,955 + ECD_03836 0.61 +0.0 4,053,955 + ECD_03836 0.61 +0.6 4,053,955 + ECD_03836 0.61 -0.8 4,053,956 - ECD_03836 0.62 +1.2 4,053,956 - ECD_03836 0.62 +0.1 4,053,984 + ECD_03836 0.63 -0.4 4,054,039 - ECD_03836 0.65 -0.0 4,054,071 + ECD_03836 0.67 -0.0 4,054,092 + ECD_03836 0.67 -0.3 4,054,092 + ECD_03836 0.67 -1.0 4,054,092 + ECD_03836 0.67 +0.8 4,054,093 - ECD_03836 0.67 +1.2 4,054,209 - ECD_03836 0.73 -1.3 4,054,256 + ECD_03836 0.75 -0.2 4,054,276 + ECD_03836 0.75 -0.0 4,054,276 + ECD_03836 0.75 -0.5 4,054,390 + ECD_03836 0.80 +0.2 4,054,390 + ECD_03836 0.80 +0.6 4,054,488 + ECD_03836 0.85 +0.5 4,054,488 + ECD_03836 0.85 +0.3 4,054,488 + ECD_03836 0.85 -0.4 4,054,488 + ECD_03836 0.85 -0.7 4,054,488 + ECD_03836 0.85 +0.4 4,054,662 + -0.8 4,054,663 - -1.3 4,054,663 - +0.1 4,054,663 - +0.5 4,054,663 - -0.1 4,054,663 - +0.2 4,054,667 + -1.1 4,054,674 + +0.2 4,054,674 + +0.2 4,054,674 + -1.3 4,054,674 + -0.1 4,054,674 + +0.4 4,054,674 + +1.0 4,054,675 - +0.6 4,054,675 - -0.4 4,054,684 - +0.2 4,054,837 + -0.2 4,054,921 + ECD_03837 0.13 -0.5 4,055,220 + ECD_03837 0.47 -1.0 4,055,480 - ECD_03837 0.77 -0.3 4,055,499 + ECD_03837 0.79 -0.8 4,055,500 - ECD_03837 0.79 +0.0 4,055,681 + +0.3 4,055,682 - +0.6 4,055,682 - -0.5 4,055,691 + -0.2 4,055,691 + -0.5 4,055,732 + ECD_03838 0.14 +0.6 4,055,732 + ECD_03838 0.14 +0.1 4,055,732 + ECD_03838 0.14 -0.3 4,055,733 - ECD_03838 0.14 +0.1 4,055,736 + ECD_03838 0.15 -0.0 4,055,736 + ECD_03838 0.15 -0.7 4,055,736 + ECD_03838 0.15 -0.3 4,055,736 + ECD_03838 0.15 +0.1 4,055,736 + ECD_03838 0.15 +0.4 4,055,736 + ECD_03838 0.15 +0.4 4,055,736 + ECD_03838 0.15 -0.3 4,055,736 + ECD_03838 0.15 +1.0 4,055,736 + ECD_03838 0.15 +0.2 4,055,736 + ECD_03838 0.15 -0.1 4,055,736 + ECD_03838 0.15 -0.0 4,055,736 + ECD_03838 0.15 -0.0 4,055,736 + ECD_03838 0.15 -0.7 4,055,736 + ECD_03838 0.15 -0.5 4,055,736 + ECD_03838 0.15 +0.3 4,055,736 + ECD_03838 0.15 +0.4 4,055,736 + ECD_03838 0.15 -0.1 4,055,736 + ECD_03838 0.15 +0.2 4,055,736 + ECD_03838 0.15 -0.0 4,055,737 - ECD_03838 0.15 -0.1 4,055,737 - ECD_03838 0.15 +0.1 4,055,737 - ECD_03838 0.15 -1.4 4,055,737 - ECD_03838 0.15 +0.5 4,055,737 - ECD_03838 0.15 +0.4 4,055,737 - ECD_03838 0.15 -0.1 4,055,737 - ECD_03838 0.15 -0.3 4,055,737 - ECD_03838 0.15 +0.4 4,055,737 - ECD_03838 0.15 -0.1 4,055,737 - ECD_03838 0.15 -0.7 4,055,738 + ECD_03838 0.15 +0.3 4,055,739 - ECD_03838 0.16 +1.4 4,055,739 - ECD_03838 0.16 +0.6 4,055,919 + ECD_03838 0.68 +0.2 4,055,937 + ECD_03838 0.74 -0.7 4,055,937 + ECD_03838 0.74 +0.1 4,055,938 - ECD_03838 0.74 +0.2 4,056,015 - -0.5 4,056,094 - -0.2 4,056,113 + ECD_03839 0.12 +1.4 4,056,113 + ECD_03839 0.12 +0.4 4,056,113 + ECD_03839 0.12 +0.0 4,056,114 - ECD_03839 0.12 +0.1 4,056,167 + ECD_03839 0.18 -0.1 4,056,186 + ECD_03839 0.20 -0.3 4,056,186 + ECD_03839 0.20 +0.1 4,056,187 - ECD_03839 0.20 -0.4 4,056,187 - ECD_03839 0.20 -0.6 4,056,216 - ECD_03839 0.24 +0.1 4,056,223 - ECD_03839 0.25 -0.2 4,056,277 - ECD_03839 0.31 +0.1 4,056,333 + ECD_03839 0.38 +0.7 4,056,335 + ECD_03839 0.38 -0.4 4,056,345 + ECD_03839 0.39 -0.3 4,056,355 + ECD_03839 0.40 +0.1 4,056,503 - ECD_03839 0.58 +0.2 4,056,549 - ECD_03839 0.63 +0.6 4,056,610 - ECD_03839 0.70 -0.4 4,056,665 + ECD_03839 0.77 +0.0 4,056,665 + ECD_03839 0.77 -0.2 4,056,666 - ECD_03839 0.77 +0.8 4,056,666 - ECD_03839 0.77 -0.5
Or see this region's nucleotide sequence