Strain Fitness in Escherichia coli BL21 around ECD_03725

Experiment: Tailocin 264

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03724 and ECD_03725 are separated by 216 nucleotidesECD_03725 and ECD_03726 are separated by 94 nucleotidesECD_03726 and ECD_03727 are separated by 13 nucleotides ECD_03724: ECD_03724 - putative transcriptional regulator, at 3,923,260 to 3,924,027 _03724 ECD_03725: ECD_03725 - DNA recombination protein, at 3,924,244 to 3,925,671 _03725 ECD_03726: ECD_03726 - bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase/ S-adenosylmethionine:2-DMK methyltransferase, at 3,925,766 to 3,926,521 _03726 ECD_03727: ECD_03727 - aerobic ubiquinone synthesis protein, SCP2 family protein, at 3,926,535 to 3,927,140 _03727 Position (kb) 3924 3925 3926Strain fitness (log2 ratio) -2 -1 0 1 2at 3923.250 kb on + strandat 3923.261 kb on + strandat 3923.261 kb on + strandat 3923.262 kb on - strandat 3923.265 kb on + strandat 3923.330 kb on + strandat 3923.330 kb on + strandat 3923.330 kb on + strandat 3923.330 kb on + strandat 3923.331 kb on - strandat 3923.331 kb on - strandat 3923.331 kb on - strandat 3923.331 kb on - strandat 3923.331 kb on - strandat 3923.331 kb on - strandat 3923.364 kb on + strand, within ECD_03724at 3923.364 kb on + strand, within ECD_03724at 3923.364 kb on + strand, within ECD_03724at 3923.364 kb on + strand, within ECD_03724at 3923.364 kb on + strand, within ECD_03724at 3923.365 kb on - strand, within ECD_03724at 3923.365 kb on - strand, within ECD_03724at 3923.365 kb on - strand, within ECD_03724at 3923.365 kb on - strand, within ECD_03724at 3923.365 kb on - strand, within ECD_03724at 3923.365 kb on - strand, within ECD_03724at 3923.365 kb on - strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.366 kb on + strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.367 kb on - strand, within ECD_03724at 3923.492 kb on + strand, within ECD_03724at 3923.682 kb on - strand, within ECD_03724at 3923.682 kb on - strand, within ECD_03724at 3923.732 kb on + strand, within ECD_03724at 3923.733 kb on - strand, within ECD_03724at 3923.858 kb on + strand, within ECD_03724at 3923.884 kb on + strand, within ECD_03724at 3923.954 kb on + strandat 3923.954 kb on + strandat 3923.955 kb on - strandat 3923.955 kb on - strandat 3923.964 kb on + strandat 3923.964 kb on + strandat 3923.965 kb on - strandat 3923.984 kb on - strandat 3923.984 kb on - strandat 3923.984 kb on - strandat 3923.986 kb on + strandat 3923.986 kb on + strandat 3923.987 kb on - strandat 3923.987 kb on - strandat 3924.045 kb on - strandat 3924.064 kb on + strandat 3924.065 kb on - strandat 3924.065 kb on - strandat 3924.065 kb on - strandat 3924.065 kb on - strandat 3924.065 kb on - strandat 3924.065 kb on - strandat 3924.195 kb on - strandat 3924.195 kb on - strandat 3924.207 kb on + strandat 3924.265 kb on + strandat 3924.273 kb on + strandat 3924.274 kb on - strandat 3924.316 kb on + strandat 3924.316 kb on + strandat 3924.316 kb on + strandat 3924.399 kb on + strand, within ECD_03725at 3924.465 kb on + strand, within ECD_03725at 3924.465 kb on + strand, within ECD_03725at 3924.465 kb on + strand, within ECD_03725at 3924.465 kb on + strand, within ECD_03725at 3924.466 kb on - strand, within ECD_03725at 3924.466 kb on - strand, within ECD_03725at 3924.466 kb on - strand, within ECD_03725at 3924.468 kb on + strand, within ECD_03725at 3924.500 kb on + strand, within ECD_03725at 3924.500 kb on + strand, within ECD_03725at 3924.501 kb on - strand, within ECD_03725at 3924.677 kb on + strand, within ECD_03725at 3924.678 kb on - strand, within ECD_03725at 3924.840 kb on + strand, within ECD_03725at 3924.840 kb on + strand, within ECD_03725at 3924.840 kb on + strand, within ECD_03725at 3924.840 kb on + strand, within ECD_03725at 3924.841 kb on - strand, within ECD_03725at 3924.841 kb on - strand, within ECD_03725at 3924.866 kb on + strand, within ECD_03725at 3924.867 kb on - strand, within ECD_03725at 3924.867 kb on - strand, within ECD_03725at 3924.867 kb on - strand, within ECD_03725at 3924.869 kb on + strand, within ECD_03725at 3924.910 kb on + strand, within ECD_03725at 3924.911 kb on - strand, within ECD_03725at 3924.916 kb on + strand, within ECD_03725at 3924.917 kb on - strand, within ECD_03725at 3924.917 kb on - strand, within ECD_03725at 3925.034 kb on - strand, within ECD_03725at 3925.043 kb on - strand, within ECD_03725at 3925.064 kb on - strand, within ECD_03725at 3925.064 kb on - strand, within ECD_03725at 3925.064 kb on - strand, within ECD_03725at 3925.092 kb on + strand, within ECD_03725at 3925.092 kb on + strand, within ECD_03725at 3925.092 kb on + strand, within ECD_03725at 3925.093 kb on - strand, within ECD_03725at 3925.093 kb on - strand, within ECD_03725at 3925.171 kb on + strand, within ECD_03725at 3925.172 kb on - strand, within ECD_03725at 3925.185 kb on + strand, within ECD_03725at 3925.186 kb on - strand, within ECD_03725at 3925.379 kb on - strand, within ECD_03725at 3925.447 kb on - strand, within ECD_03725at 3925.447 kb on - strand, within ECD_03725at 3925.450 kb on + strand, within ECD_03725at 3925.523 kb on + strand, within ECD_03725at 3925.592 kb on - strandat 3925.633 kb on + strandat 3925.633 kb on + strandat 3925.634 kb on - strandat 3925.634 kb on - strandat 3925.653 kb on + strandat 3925.653 kb on + strandat 3925.653 kb on + strandat 3925.654 kb on - strandat 3925.654 kb on - strandat 3925.654 kb on - strandat 3925.684 kb on - strandat 3926.512 kb on + strandat 3926.512 kb on + strandat 3926.512 kb on + strandat 3926.512 kb on + strandat 3926.641 kb on + strand, within ECD_03727at 3926.656 kb on + strand, within ECD_03727

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Per-strain Table

Position Strand Gene LocusTag Fraction Tailocin 264
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3,923,250 + +0.5
3,923,261 + -0.7
3,923,261 + -0.2
3,923,262 - +0.4
3,923,265 + -1.0
3,923,330 + -0.4
3,923,330 + -0.4
3,923,330 + +0.1
3,923,330 + +0.7
3,923,331 - +0.2
3,923,331 - +0.1
3,923,331 - +0.3
3,923,331 - +0.6
3,923,331 - -0.3
3,923,331 - -0.3
3,923,364 + ECD_03724 0.14 -0.3
3,923,364 + ECD_03724 0.14 -0.3
3,923,364 + ECD_03724 0.14 +0.2
3,923,364 + ECD_03724 0.14 -0.0
3,923,364 + ECD_03724 0.14 -0.4
3,923,365 - ECD_03724 0.14 -0.1
3,923,365 - ECD_03724 0.14 +0.1
3,923,365 - ECD_03724 0.14 -0.3
3,923,365 - ECD_03724 0.14 +0.3
3,923,365 - ECD_03724 0.14 -0.1
3,923,365 - ECD_03724 0.14 +0.2
3,923,365 - ECD_03724 0.14 +0.2
3,923,366 + ECD_03724 0.14 +0.3
3,923,366 + ECD_03724 0.14 +0.5
3,923,366 + ECD_03724 0.14 -0.3
3,923,366 + ECD_03724 0.14 +1.4
3,923,366 + ECD_03724 0.14 +0.3
3,923,366 + ECD_03724 0.14 -0.3
3,923,366 + ECD_03724 0.14 -0.1
3,923,366 + ECD_03724 0.14 +0.5
3,923,366 + ECD_03724 0.14 +0.6
3,923,366 + ECD_03724 0.14 +0.0
3,923,366 + ECD_03724 0.14 -0.9
3,923,366 + ECD_03724 0.14 +0.6
3,923,366 + ECD_03724 0.14 +0.1
3,923,366 + ECD_03724 0.14 +0.7
3,923,366 + ECD_03724 0.14 -0.2
3,923,366 + ECD_03724 0.14 -0.6
3,923,366 + ECD_03724 0.14 +0.2
3,923,366 + ECD_03724 0.14 -0.2
3,923,366 + ECD_03724 0.14 +0.5
3,923,366 + ECD_03724 0.14 -0.5
3,923,366 + ECD_03724 0.14 +0.1
3,923,366 + ECD_03724 0.14 +0.8
3,923,367 - ECD_03724 0.14 -0.3
3,923,367 - ECD_03724 0.14 -0.7
3,923,367 - ECD_03724 0.14 +0.5
3,923,367 - ECD_03724 0.14 +0.0
3,923,367 - ECD_03724 0.14 +0.6
3,923,367 - ECD_03724 0.14 -0.2
3,923,367 - ECD_03724 0.14 -0.5
3,923,367 - ECD_03724 0.14 -0.1
3,923,367 - ECD_03724 0.14 +0.2
3,923,367 - ECD_03724 0.14 -0.2
3,923,367 - ECD_03724 0.14 -0.6
3,923,367 - ECD_03724 0.14 -0.6
3,923,492 + ECD_03724 0.30 +0.0
3,923,682 - ECD_03724 0.55 +1.1
3,923,682 - ECD_03724 0.55 +0.3
3,923,732 + ECD_03724 0.61 -0.3
3,923,733 - ECD_03724 0.62 +1.1
3,923,858 + ECD_03724 0.78 +1.0
3,923,884 + ECD_03724 0.81 +0.3
3,923,954 + -1.5
3,923,954 + -1.0
3,923,955 - -0.2
3,923,955 - +1.6
3,923,964 + +1.1
3,923,964 + -0.2
3,923,965 - +0.9
3,923,984 - -0.3
3,923,984 - -0.9
3,923,984 - +0.4
3,923,986 + -0.9
3,923,986 + +0.5
3,923,987 - +0.3
3,923,987 - -0.2
3,924,045 - +0.6
3,924,064 + +0.4
3,924,065 - +0.3
3,924,065 - -0.1
3,924,065 - +0.4
3,924,065 - -0.3
3,924,065 - +0.3
3,924,065 - +0.5
3,924,195 - +0.3
3,924,195 - -0.2
3,924,207 + +1.2
3,924,265 + +0.4
3,924,273 + +0.6
3,924,274 - +0.1
3,924,316 + +0.4
3,924,316 + +0.4
3,924,316 + -0.3
3,924,399 + ECD_03725 0.11 +0.1
3,924,465 + ECD_03725 0.15 +0.0
3,924,465 + ECD_03725 0.15 +0.4
3,924,465 + ECD_03725 0.15 +0.4
3,924,465 + ECD_03725 0.15 +0.1
3,924,466 - ECD_03725 0.16 -0.5
3,924,466 - ECD_03725 0.16 -1.4
3,924,466 - ECD_03725 0.16 +0.2
3,924,468 + ECD_03725 0.16 +0.4
3,924,500 + ECD_03725 0.18 +0.6
3,924,500 + ECD_03725 0.18 +0.4
3,924,501 - ECD_03725 0.18 +0.1
3,924,677 + ECD_03725 0.30 +0.5
3,924,678 - ECD_03725 0.30 +0.4
3,924,840 + ECD_03725 0.42 +0.2
3,924,840 + ECD_03725 0.42 +0.2
3,924,840 + ECD_03725 0.42 -0.7
3,924,840 + ECD_03725 0.42 -0.5
3,924,841 - ECD_03725 0.42 -0.1
3,924,841 - ECD_03725 0.42 +0.7
3,924,866 + ECD_03725 0.44 -0.5
3,924,867 - ECD_03725 0.44 +0.5
3,924,867 - ECD_03725 0.44 +0.1
3,924,867 - ECD_03725 0.44 -0.2
3,924,869 + ECD_03725 0.44 -0.6
3,924,910 + ECD_03725 0.47 +0.3
3,924,911 - ECD_03725 0.47 +0.8
3,924,916 + ECD_03725 0.47 -0.6
3,924,917 - ECD_03725 0.47 -0.0
3,924,917 - ECD_03725 0.47 +0.3
3,925,034 - ECD_03725 0.55 +0.2
3,925,043 - ECD_03725 0.56 +0.2
3,925,064 - ECD_03725 0.57 +0.3
3,925,064 - ECD_03725 0.57 +0.1
3,925,064 - ECD_03725 0.57 -0.1
3,925,092 + ECD_03725 0.59 +2.0
3,925,092 + ECD_03725 0.59 +0.0
3,925,092 + ECD_03725 0.59 +1.0
3,925,093 - ECD_03725 0.59 +0.0
3,925,093 - ECD_03725 0.59 +1.4
3,925,171 + ECD_03725 0.65 +1.0
3,925,172 - ECD_03725 0.65 +0.3
3,925,185 + ECD_03725 0.66 +0.2
3,925,186 - ECD_03725 0.66 -0.2
3,925,379 - ECD_03725 0.79 -0.1
3,925,447 - ECD_03725 0.84 +1.1
3,925,447 - ECD_03725 0.84 +0.8
3,925,450 + ECD_03725 0.84 +0.7
3,925,523 + ECD_03725 0.90 +1.5
3,925,592 - -0.2
3,925,633 + -0.6
3,925,633 + -0.4
3,925,634 - +0.3
3,925,634 - +0.4
3,925,653 + +0.7
3,925,653 + -0.4
3,925,653 + -0.1
3,925,654 - +0.3
3,925,654 - +0.1
3,925,654 - +0.7
3,925,684 - +0.7
3,926,512 + +0.0
3,926,512 + -0.5
3,926,512 + +0.4
3,926,512 + +0.2
3,926,641 + ECD_03727 0.17 +0.8
3,926,656 + ECD_03727 0.20 -2.0

Or see this region's nucleotide sequence