Strain Fitness in Escherichia coli BL21 around ECD_02401

Experiment: Tailocin 264

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02400 and ECD_02401 are separated by 161 nucleotidesECD_02401 and ECD_02402 overlap by 4 nucleotidesECD_02402 and ECD_02403 are separated by 69 nucleotides ECD_02400: ECD_02400 - IMP dehydrogenase, at 2,497,084 to 2,498,550 _02400 ECD_02401: ECD_02401 - exonuclease VII, large subunit, at 2,498,712 to 2,500,082 _02401 ECD_02402: ECD_02402 - DUF1407 family protein, at 2,500,079 to 2,500,294 _02402 ECD_02403: ECD_02403 - GTPase; multicopy suppressor of ftsJ, at 2,500,364 to 2,501,836 _02403 Position (kb) 2498 2499 2500 2501Strain fitness (log2 ratio) -1 0 1at 2497.753 kb on - strand, within ECD_02400at 2497.753 kb on - strand, within ECD_02400at 2497.781 kb on - strand, within ECD_02400at 2498.096 kb on + strand, within ECD_02400at 2498.096 kb on + strand, within ECD_02400at 2498.097 kb on - strand, within ECD_02400at 2498.097 kb on - strand, within ECD_02400at 2498.097 kb on - strand, within ECD_02400at 2498.546 kb on - strandat 2498.598 kb on + strandat 2498.716 kb on + strandat 2499.169 kb on + strand, within ECD_02401at 2499.169 kb on + strand, within ECD_02401at 2499.176 kb on + strand, within ECD_02401at 2499.310 kb on + strand, within ECD_02401at 2499.573 kb on + strand, within ECD_02401at 2499.713 kb on + strand, within ECD_02401at 2499.944 kb on + strand, within ECD_02401at 2500.347 kb on - strandat 2500.356 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Tailocin 264
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2,497,753 - ECD_02400 0.46 -0.4
2,497,753 - ECD_02400 0.46 +1.5
2,497,781 - ECD_02400 0.48 +0.5
2,498,096 + ECD_02400 0.69 -0.5
2,498,096 + ECD_02400 0.69 +0.5
2,498,097 - ECD_02400 0.69 -0.9
2,498,097 - ECD_02400 0.69 +0.7
2,498,097 - ECD_02400 0.69 -0.7
2,498,546 - -0.5
2,498,598 + +0.5
2,498,716 + -0.3
2,499,169 + ECD_02401 0.33 -1.1
2,499,169 + ECD_02401 0.33 -0.2
2,499,176 + ECD_02401 0.34 -0.2
2,499,310 + ECD_02401 0.44 -0.9
2,499,573 + ECD_02401 0.63 +0.3
2,499,713 + ECD_02401 0.73 -0.5
2,499,944 + ECD_02401 0.90 +0.2
2,500,347 - -0.2
2,500,356 - -0.5

Or see this region's nucleotide sequence