Strain Fitness in Escherichia coli BL21 around ECD_01826

Experiment: Tailocin 264

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01825 and ECD_01826 are separated by 130 nucleotidesECD_01826 and ECD_01827 are separated by 119 nucleotides ECD_01825: ECD_01825 - pyruvate kinase II, at 1,883,373 to 1,884,815 _01825 ECD_01826: ECD_01826 - myristoyl-acyl carrier protein (ACP)-dependent acyltransferase, at 1,884,946 to 1,885,917 _01826 ECD_01827: ECD_01827 - murein DD-endopeptidase, space-maker hydrolase, septation protein, at 1,886,037 to 1,887,359 _01827 Position (kb) 1884 1885 1886Strain fitness (log2 ratio) -2 -1 0 1at 1883.988 kb on + strand, within ECD_01825at 1884.245 kb on + strand, within ECD_01825at 1884.245 kb on + strand, within ECD_01825at 1884.483 kb on + strand, within ECD_01825at 1884.782 kb on + strandat 1884.789 kb on - strandat 1885.184 kb on - strand, within ECD_01826at 1885.241 kb on + strand, within ECD_01826at 1885.301 kb on + strand, within ECD_01826at 1885.302 kb on - strand, within ECD_01826at 1885.406 kb on + strand, within ECD_01826at 1885.407 kb on - strand, within ECD_01826at 1885.964 kb on - strandat 1886.035 kb on - strandat 1886.161 kb on - strandat 1886.167 kb on - strandat 1886.167 kb on - strandat 1886.167 kb on - strandat 1886.280 kb on - strand, within ECD_01827at 1886.281 kb on + strand, within ECD_01827at 1886.294 kb on - strand, within ECD_01827at 1886.321 kb on - strand, within ECD_01827at 1886.321 kb on - strand, within ECD_01827at 1886.478 kb on - strand, within ECD_01827at 1886.573 kb on - strand, within ECD_01827at 1886.656 kb on - strand, within ECD_01827at 1886.862 kb on - strand, within ECD_01827at 1886.869 kb on + strand, within ECD_01827

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Per-strain Table

Position Strand Gene LocusTag Fraction Tailocin 264
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1,883,988 + ECD_01825 0.43 +1.2
1,884,245 + ECD_01825 0.60 +0.7
1,884,245 + ECD_01825 0.60 +0.7
1,884,483 + ECD_01825 0.77 -2.4
1,884,782 + +0.3
1,884,789 - +0.5
1,885,184 - ECD_01826 0.24 +0.5
1,885,241 + ECD_01826 0.30 -1.0
1,885,301 + ECD_01826 0.37 +0.8
1,885,302 - ECD_01826 0.37 -0.7
1,885,406 + ECD_01826 0.47 +0.6
1,885,407 - ECD_01826 0.47 -1.0
1,885,964 - +0.7
1,886,035 - -0.2
1,886,161 - +1.3
1,886,167 - +0.6
1,886,167 - -0.3
1,886,167 - +0.5
1,886,280 - ECD_01827 0.18 +0.9
1,886,281 + ECD_01827 0.18 +1.2
1,886,294 - ECD_01827 0.19 +0.1
1,886,321 - ECD_01827 0.21 -0.7
1,886,321 - ECD_01827 0.21 -0.7
1,886,478 - ECD_01827 0.33 +0.7
1,886,573 - ECD_01827 0.41 -0.3
1,886,656 - ECD_01827 0.47 +0.4
1,886,862 - ECD_01827 0.62 +0.3
1,886,869 + ECD_01827 0.63 +1.0

Or see this region's nucleotide sequence