Experiment: Tailocin 264
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00553 and ECD_00554 are separated by 215 nucleotides ECD_00554 and ECD_00555 overlap by 4 nucleotides ECD_00555 and ECD_00556 overlap by 4 nucleotides
ECD_00553: ECD_00553 - enterobactin synthase multienzyme complex component, ATP-dependent, at 574,644 to 578,525
_00553
ECD_00554: ECD_00554 - regulator of length of O-antigen component of lipopolysaccharide chains, at 578,741 to 579,874
_00554
ECD_00555: ECD_00555 - ferrienterobactin ABC transporter ATPase, at 579,871 to 580,686
_00555
ECD_00556: ECD_00556 - iron-enterobactin ABC transporter permease, at 580,683 to 581,675
_00556
Position (kb) 578
579
580 Strain fitness (log2 ratio) -1
0
1 at 578.138 kb on + strand at 578.138 kb on + strand at 578.180 kb on + strand at 578.292 kb on + strand at 578.346 kb on - strand at 578.388 kb on - strand at 578.436 kb on + strand at 579.328 kb on + strand, within ECD_00554 at 579.633 kb on + strand, within ECD_00554 at 579.761 kb on - strand at 579.867 kb on + strand at 579.868 kb on - strand at 580.075 kb on - strand, within ECD_00555 at 580.101 kb on + strand, within ECD_00555 at 580.195 kb on - strand, within ECD_00555 at 580.598 kb on - strand, within ECD_00555
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 264 remove 578,138 + +0.6 578,138 + -0.0 578,180 + +1.2 578,292 + +0.3 578,346 - +1.0 578,388 - +0.7 578,436 + -1.0 579,328 + ECD_00554 0.52 -0.6 579,633 + ECD_00554 0.79 -0.8 579,761 - +1.0 579,867 + -0.3 579,868 - +0.2 580,075 - ECD_00555 0.25 +0.2 580,101 + ECD_00555 0.28 -1.7 580,195 - ECD_00555 0.40 +0.8 580,598 - ECD_00555 0.89 +0.6
Or see this region's nucleotide sequence