Strain Fitness in Escherichia coli BL21 around ECD_00414

Experiment: Tailocin 264

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00413 and ECD_00414 are separated by 22 nucleotidesECD_00414 and ECD_00415 are separated by 141 nucleotidesECD_00415 and ECD_00416 are separated by 127 nucleotides ECD_00413: ECD_00413 - multidrug efflux system protein, at 450,300 to 453,449 _00413 ECD_00414: ECD_00414 - multidrug efflux system, at 453,472 to 454,665 _00414 ECD_00415: ECD_00415 - transcriptional repressor, at 454,807 to 455,454 _00415 ECD_00416: ECD_00416 - mechanosensitive channel protein, intermediate conductance, K+ regulated, at 455,582 to 458,944 _00416 Position (kb) 453 454 455Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 452.627 kb on - strand, within ECD_00413at 452.748 kb on - strand, within ECD_00413at 452.905 kb on + strand, within ECD_00413at 452.981 kb on - strand, within ECD_00413at 453.159 kb on - strandat 453.221 kb on - strandat 453.221 kb on - strandat 453.221 kb on - strandat 453.221 kb on - strandat 453.221 kb on - strandat 453.221 kb on - strandat 453.221 kb on - strandat 453.221 kb on - strandat 453.246 kb on - strandat 453.342 kb on - strandat 453.455 kb on - strandat 453.468 kb on + strandat 453.474 kb on - strandat 453.474 kb on - strandat 453.584 kb on - strandat 453.584 kb on - strandat 453.584 kb on - strandat 453.584 kb on - strandat 453.584 kb on - strandat 453.692 kb on - strand, within ECD_00414at 453.847 kb on - strand, within ECD_00414at 454.028 kb on + strand, within ECD_00414at 454.028 kb on + strand, within ECD_00414at 454.029 kb on - strand, within ECD_00414at 454.082 kb on - strand, within ECD_00414at 454.082 kb on - strand, within ECD_00414at 454.111 kb on - strand, within ECD_00414at 454.111 kb on - strand, within ECD_00414at 454.148 kb on + strand, within ECD_00414at 454.239 kb on - strand, within ECD_00414at 454.239 kb on - strand, within ECD_00414at 454.239 kb on - strand, within ECD_00414at 454.256 kb on + strand, within ECD_00414at 454.352 kb on + strand, within ECD_00414at 454.353 kb on - strand, within ECD_00414at 454.353 kb on - strand, within ECD_00414at 454.353 kb on - strand, within ECD_00414at 454.365 kb on - strand, within ECD_00414at 454.365 kb on - strand, within ECD_00414at 454.538 kb on - strand, within ECD_00414at 454.538 kb on - strand, within ECD_00414at 454.541 kb on - strand, within ECD_00414at 454.669 kb on + strandat 454.670 kb on - strandat 454.670 kb on - strandat 454.670 kb on - strandat 454.713 kb on + strandat 454.714 kb on - strandat 454.734 kb on + strandat 454.735 kb on - strandat 454.735 kb on - strandat 454.736 kb on + strandat 454.737 kb on - strandat 454.759 kb on + strandat 454.759 kb on + strandat 454.792 kb on + strandat 454.806 kb on + strandat 454.807 kb on - strandat 455.024 kb on + strand, within ECD_00415at 455.081 kb on + strand, within ECD_00415at 455.084 kb on + strand, within ECD_00415at 455.084 kb on + strand, within ECD_00415at 455.142 kb on + strand, within ECD_00415at 455.142 kb on + strand, within ECD_00415at 455.142 kb on + strand, within ECD_00415at 455.199 kb on + strand, within ECD_00415at 455.200 kb on - strand, within ECD_00415at 455.250 kb on + strand, within ECD_00415at 455.316 kb on + strand, within ECD_00415at 455.410 kb on + strandat 455.411 kb on - strandat 455.588 kb on - strandat 455.588 kb on - strandat 455.600 kb on + strandat 455.635 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Tailocin 264
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452,627 - ECD_00413 0.74 -4.3
452,748 - ECD_00413 0.78 -2.8
452,905 + ECD_00413 0.83 -3.7
452,981 - ECD_00413 0.85 -4.6
453,159 - -3.4
453,221 - -3.3
453,221 - -2.4
453,221 - -4.9
453,221 - -4.6
453,221 - -4.5
453,221 - -5.3
453,221 - -4.5
453,221 - -3.1
453,246 - -5.6
453,342 - -2.5
453,455 - -1.2
453,468 + -3.0
453,474 - -0.6
453,474 - -0.2
453,584 - -3.0
453,584 - -5.0
453,584 - -5.5
453,584 - -4.5
453,584 - -5.4
453,692 - ECD_00414 0.18 -2.0
453,847 - ECD_00414 0.31 -3.7
454,028 + ECD_00414 0.47 -1.8
454,028 + ECD_00414 0.47 -2.9
454,029 - ECD_00414 0.47 -4.0
454,082 - ECD_00414 0.51 -3.6
454,082 - ECD_00414 0.51 -3.8
454,111 - ECD_00414 0.54 -4.5
454,111 - ECD_00414 0.54 -3.6
454,148 + ECD_00414 0.57 -4.4
454,239 - ECD_00414 0.64 -5.4
454,239 - ECD_00414 0.64 -3.9
454,239 - ECD_00414 0.64 -5.2
454,256 + ECD_00414 0.66 -1.3
454,352 + ECD_00414 0.74 -1.6
454,353 - ECD_00414 0.74 -5.0
454,353 - ECD_00414 0.74 -3.7
454,353 - ECD_00414 0.74 -4.2
454,365 - ECD_00414 0.75 -4.6
454,365 - ECD_00414 0.75 -4.6
454,538 - ECD_00414 0.89 -3.7
454,538 - ECD_00414 0.89 -4.3
454,541 - ECD_00414 0.90 -4.7
454,669 + -4.1
454,670 - -3.6
454,670 - -3.7
454,670 - -5.7
454,713 + -3.6
454,714 - +0.5
454,734 + -2.4
454,735 - -0.9
454,735 - -0.7
454,736 + -1.7
454,737 - -0.5
454,759 + +0.4
454,759 + -0.2
454,792 + +0.2
454,806 + +1.3
454,807 - -0.1
455,024 + ECD_00415 0.33 -1.3
455,081 + ECD_00415 0.42 +0.2
455,084 + ECD_00415 0.43 +0.0
455,084 + ECD_00415 0.43 -0.3
455,142 + ECD_00415 0.52 +0.1
455,142 + ECD_00415 0.52 -0.7
455,142 + ECD_00415 0.52 -0.0
455,199 + ECD_00415 0.60 -0.4
455,200 - ECD_00415 0.61 +0.4
455,250 + ECD_00415 0.68 -0.3
455,316 + ECD_00415 0.79 +0.3
455,410 + -0.1
455,411 - +0.4
455,588 - +0.2
455,588 - +0.7
455,600 + -0.0
455,635 + +0.2

Or see this region's nucleotide sequence