Strain Fitness in Escherichia coli BL21 around ECD_00392

Experiment: Tailocin 264

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00391 and ECD_00392 are separated by 208 nucleotidesECD_00392 and ECD_00393 are separated by 191 nucleotides ECD_00391: ECD_00391 - DNA-binding ATP-dependent protease La, at 427,922 to 430,276 _00391 ECD_00392: ECD_00392 - HU, DNA-binding transcriptional regulator, beta subunit, at 430,485 to 430,757 _00392 ECD_00393: ECD_00393 - periplasmic folding chaperone, has an inactive PPIase domain, at 430,949 to 432,820 _00393 Position (kb) 430 431Strain fitness (log2 ratio) -3 -2 -1 0 1at 429.525 kb on - strand, within ECD_00391at 429.715 kb on - strand, within ECD_00391at 429.797 kb on + strand, within ECD_00391at 429.798 kb on - strand, within ECD_00391at 429.970 kb on + strand, within ECD_00391at 429.970 kb on + strand, within ECD_00391at 429.971 kb on - strand, within ECD_00391at 429.971 kb on - strand, within ECD_00391at 430.173 kb on + strandat 430.173 kb on + strandat 430.173 kb on + strandat 430.358 kb on + strandat 430.359 kb on - strandat 430.386 kb on - strandat 430.398 kb on - strandat 430.418 kb on - strandat 430.419 kb on + strandat 430.419 kb on + strandat 430.420 kb on - strandat 430.420 kb on - strandat 430.436 kb on + strandat 430.490 kb on + strandat 430.565 kb on + strand, within ECD_00392at 430.565 kb on + strand, within ECD_00392at 430.565 kb on + strand, within ECD_00392at 430.566 kb on - strand, within ECD_00392at 430.566 kb on - strand, within ECD_00392at 430.568 kb on + strand, within ECD_00392at 430.568 kb on + strand, within ECD_00392at 430.609 kb on + strand, within ECD_00392at 430.609 kb on + strand, within ECD_00392at 430.609 kb on + strand, within ECD_00392at 430.706 kb on + strand, within ECD_00392at 430.730 kb on + strandat 430.730 kb on + strandat 430.755 kb on + strandat 430.755 kb on + strandat 430.801 kb on + strandat 430.801 kb on + strandat 430.818 kb on + strandat 430.943 kb on + strandat 431.069 kb on + strandat 431.069 kb on + strandat 431.470 kb on + strand, within ECD_00393at 431.711 kb on + strand, within ECD_00393

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Per-strain Table

Position Strand Gene LocusTag Fraction Tailocin 264
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429,525 - ECD_00391 0.68 -0.3
429,715 - ECD_00391 0.76 +0.1
429,797 + ECD_00391 0.80 -0.3
429,798 - ECD_00391 0.80 +0.0
429,970 + ECD_00391 0.87 +0.7
429,970 + ECD_00391 0.87 -1.1
429,971 - ECD_00391 0.87 +0.2
429,971 - ECD_00391 0.87 -0.2
430,173 + +0.3
430,173 + +0.2
430,173 + +0.5
430,358 + -1.3
430,359 - -0.1
430,386 - -0.1
430,398 - -0.1
430,418 - -1.0
430,419 + -0.8
430,419 + -1.3
430,420 - -1.4
430,420 - -1.4
430,436 + +0.0
430,490 + -1.8
430,565 + ECD_00392 0.29 -0.9
430,565 + ECD_00392 0.29 -2.3
430,565 + ECD_00392 0.29 -0.7
430,566 - ECD_00392 0.30 -0.6
430,566 - ECD_00392 0.30 -2.0
430,568 + ECD_00392 0.30 -1.2
430,568 + ECD_00392 0.30 -0.4
430,609 + ECD_00392 0.45 -1.2
430,609 + ECD_00392 0.45 -1.2
430,609 + ECD_00392 0.45 -2.1
430,706 + ECD_00392 0.81 -0.0
430,730 + -1.1
430,730 + -0.6
430,755 + -0.6
430,755 + -0.9
430,801 + -0.3
430,801 + -0.5
430,818 + -0.2
430,943 + -1.3
431,069 + -0.3
431,069 + +0.1
431,470 + ECD_00393 0.28 +0.4
431,711 + ECD_00393 0.41 -3.5

Or see this region's nucleotide sequence