Experiment: Tailocin 264
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00357 and ECD_00358 are separated by 127 nucleotides ECD_00358 and ECD_00359 are separated by 176 nucleotides
ECD_00357: ECD_00357 - SecYEG protein translocase auxillary subunit, at 394,907 to 395,878
_00357
ECD_00358: ECD_00358 - HNH nuclease family protein, at 396,006 to 396,353
_00358
ECD_00359: ECD_00359 - nucleoside channel, receptor of phage T6 and colicin K, at 396,530 to 397,414
_00359
Position (kb) 396
397 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 395.934 kb on + strand at 395.983 kb on - strand at 396.132 kb on - strand, within ECD_00358 at 396.232 kb on - strand, within ECD_00358 at 396.250 kb on - strand, within ECD_00358 at 396.307 kb on - strand, within ECD_00358 at 396.307 kb on - strand, within ECD_00358 at 396.355 kb on + strand at 396.411 kb on + strand at 396.412 kb on - strand at 396.540 kb on + strand at 396.545 kb on + strand at 396.555 kb on + strand at 396.654 kb on - strand, within ECD_00359 at 396.715 kb on + strand, within ECD_00359 at 396.715 kb on + strand, within ECD_00359 at 396.716 kb on - strand, within ECD_00359 at 396.716 kb on - strand, within ECD_00359 at 396.719 kb on - strand, within ECD_00359 at 396.730 kb on + strand, within ECD_00359 at 396.730 kb on + strand, within ECD_00359 at 396.731 kb on - strand, within ECD_00359 at 396.734 kb on - strand, within ECD_00359 at 396.801 kb on + strand, within ECD_00359 at 396.802 kb on - strand, within ECD_00359 at 396.844 kb on - strand, within ECD_00359 at 397.004 kb on - strand, within ECD_00359 at 397.004 kb on - strand, within ECD_00359 at 397.021 kb on - strand, within ECD_00359 at 397.026 kb on + strand, within ECD_00359 at 397.026 kb on + strand, within ECD_00359 at 397.042 kb on - strand, within ECD_00359 at 397.067 kb on - strand, within ECD_00359 at 397.067 kb on - strand, within ECD_00359 at 397.197 kb on + strand, within ECD_00359 at 397.197 kb on + strand, within ECD_00359 at 397.197 kb on + strand, within ECD_00359 at 397.198 kb on - strand, within ECD_00359 at 397.198 kb on - strand, within ECD_00359 at 397.198 kb on - strand, within ECD_00359 at 397.198 kb on - strand, within ECD_00359 at 397.242 kb on + strand, within ECD_00359 at 397.243 kb on - strand, within ECD_00359 at 397.243 kb on - strand, within ECD_00359 at 397.246 kb on + strand, within ECD_00359 at 397.281 kb on + strand, within ECD_00359
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 264 remove 395,934 + -0.2 395,983 - -1.2 396,132 - ECD_00358 0.36 -0.1 396,232 - ECD_00358 0.65 -0.2 396,250 - ECD_00358 0.70 -1.1 396,307 - ECD_00358 0.86 -1.4 396,307 - ECD_00358 0.86 -0.3 396,355 + +0.4 396,411 + +0.3 396,412 - -2.1 396,540 + -0.5 396,545 + +0.3 396,555 + +0.0 396,654 - ECD_00359 0.14 -0.1 396,715 + ECD_00359 0.21 +0.2 396,715 + ECD_00359 0.21 -0.1 396,716 - ECD_00359 0.21 -0.6 396,716 - ECD_00359 0.21 +0.2 396,719 - ECD_00359 0.21 -0.4 396,730 + ECD_00359 0.23 -0.2 396,730 + ECD_00359 0.23 -0.1 396,731 - ECD_00359 0.23 -0.7 396,734 - ECD_00359 0.23 -0.5 396,801 + ECD_00359 0.31 -1.4 396,802 - ECD_00359 0.31 -0.1 396,844 - ECD_00359 0.35 +1.2 397,004 - ECD_00359 0.54 -0.1 397,004 - ECD_00359 0.54 +0.1 397,021 - ECD_00359 0.55 +0.5 397,026 + ECD_00359 0.56 +0.6 397,026 + ECD_00359 0.56 +0.4 397,042 - ECD_00359 0.58 +3.4 397,067 - ECD_00359 0.61 +0.1 397,067 - ECD_00359 0.61 +0.1 397,197 + ECD_00359 0.75 -0.1 397,197 + ECD_00359 0.75 +0.5 397,197 + ECD_00359 0.75 +0.2 397,198 - ECD_00359 0.75 -0.5 397,198 - ECD_00359 0.75 +0.0 397,198 - ECD_00359 0.75 -0.3 397,198 - ECD_00359 0.75 +0.2 397,242 + ECD_00359 0.80 +0.1 397,243 - ECD_00359 0.81 -0.0 397,243 - ECD_00359 0.81 +0.2 397,246 + ECD_00359 0.81 +0.3 397,281 + ECD_00359 0.85 -0.7
Or see this region's nucleotide sequence