Experiment: Tailocin 264
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02187 and ECD_02188 overlap by 4 nucleotides ECD_02188 and ECD_02189 overlap by 1 nucleotides ECD_02189 and ECD_02190 are separated by 14 nucleotides
ECD_02187: ECD_02187 - O-succinylbenzoate-CoA ligase, at 2,263,822 to 2,265,177
_02187
ECD_02188: ECD_02188 - O-succinylbenzoyl-CoA synthase, at 2,265,174 to 2,266,136
_02188
ECD_02189: ECD_02189 - dihydroxynaphthoic acid synthetase, at 2,266,136 to 2,266,993
_02189
ECD_02190: ECD_02190 - 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase, at 2,267,008 to 2,267,766
_02190
Position (kb)
2265
2266
2267 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2264.524 kb on - strand, within ECD_02187 at 2264.586 kb on - strand, within ECD_02187 at 2264.711 kb on + strand, within ECD_02187 at 2264.715 kb on + strand, within ECD_02187 at 2264.715 kb on + strand, within ECD_02187 at 2264.716 kb on - strand, within ECD_02187 at 2264.716 kb on - strand, within ECD_02187 at 2265.116 kb on - strand at 2265.330 kb on + strand, within ECD_02188 at 2265.442 kb on - strand, within ECD_02188 at 2265.608 kb on - strand, within ECD_02188 at 2265.728 kb on - strand, within ECD_02188 at 2265.768 kb on - strand, within ECD_02188 at 2265.848 kb on + strand, within ECD_02188 at 2265.849 kb on - strand, within ECD_02188 at 2265.849 kb on - strand, within ECD_02188 at 2265.932 kb on + strand, within ECD_02188 at 2265.933 kb on - strand, within ECD_02188 at 2266.046 kb on - strand at 2266.046 kb on - strand at 2266.486 kb on - strand, within ECD_02189 at 2266.549 kb on + strand, within ECD_02189 at 2266.609 kb on - strand, within ECD_02189 at 2266.686 kb on - strand, within ECD_02189 at 2266.686 kb on - strand, within ECD_02189
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 264 remove 2,264,524 - ECD_02187 0.52 +0.5 2,264,586 - ECD_02187 0.56 +0.1 2,264,711 + ECD_02187 0.66 -0.0 2,264,715 + ECD_02187 0.66 -1.9 2,264,715 + ECD_02187 0.66 -0.5 2,264,716 - ECD_02187 0.66 +0.0 2,264,716 - ECD_02187 0.66 -0.3 2,265,116 - +0.3 2,265,330 + ECD_02188 0.16 -1.4 2,265,442 - ECD_02188 0.28 -0.1 2,265,608 - ECD_02188 0.45 +1.1 2,265,728 - ECD_02188 0.58 +0.4 2,265,768 - ECD_02188 0.62 -0.5 2,265,848 + ECD_02188 0.70 +0.3 2,265,849 - ECD_02188 0.70 +0.7 2,265,849 - ECD_02188 0.70 +0.8 2,265,932 + ECD_02188 0.79 +2.0 2,265,933 - ECD_02188 0.79 +0.7 2,266,046 - +0.5 2,266,046 - +0.0 2,266,486 - ECD_02189 0.41 +0.7 2,266,549 + ECD_02189 0.48 +0.4 2,266,609 - ECD_02189 0.55 +1.2 2,266,686 - ECD_02189 0.64 -0.8 2,266,686 - ECD_02189 0.64 +0.5
Or see this region's nucleotide sequence