Experiment: Tailocin 256
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_04024 and ECD_04025 are separated by 10 nucleotides ECD_04025 and ECD_04026 overlap by 8 nucleotides ECD_04026 and ECD_04027 are separated by 324 nucleotides
ECD_04024: ECD_04024 - fumarate reductase (anaerobic), membrane anchor subunit, at 4,286,453 to 4,286,848
_04024
ECD_04025: ECD_04025 - fumarate reductase (anaerobic), Fe-S subunit, at 4,286,859 to 4,287,593
_04025
ECD_04026: ECD_04026 - anaerobic fumarate reductase catalytic and NAD/flavoprotein subunit, at 4,287,586 to 4,289,394
_04026
ECD_04027: ECD_04027 - Elongation Factor P Lys34 lysyltransferase, at 4,289,719 to 4,290,696
_04027
Position (kb)
4287
4288
4289
4290 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 4286.773 kb on - strand, within ECD_04024 at 4286.826 kb on + strand at 4286.826 kb on + strand at 4286.826 kb on + strand at 4286.826 kb on + strand at 4286.827 kb on - strand at 4286.904 kb on + strand at 4286.965 kb on + strand, within ECD_04025 at 4286.978 kb on + strand, within ECD_04025 at 4286.979 kb on - strand, within ECD_04025 at 4286.989 kb on - strand, within ECD_04025 at 4287.018 kb on - strand, within ECD_04025 at 4287.029 kb on + strand, within ECD_04025 at 4287.056 kb on - strand, within ECD_04025 at 4287.056 kb on - strand, within ECD_04025 at 4287.166 kb on + strand, within ECD_04025 at 4287.167 kb on - strand, within ECD_04025 at 4287.197 kb on + strand, within ECD_04025 at 4287.198 kb on - strand, within ECD_04025 at 4287.235 kb on + strand, within ECD_04025 at 4287.235 kb on + strand, within ECD_04025 at 4287.235 kb on + strand, within ECD_04025 at 4287.236 kb on - strand, within ECD_04025 at 4287.236 kb on - strand, within ECD_04025 at 4287.276 kb on - strand, within ECD_04025 at 4287.276 kb on - strand, within ECD_04025 at 4287.308 kb on + strand, within ECD_04025 at 4287.313 kb on - strand, within ECD_04025 at 4287.329 kb on + strand, within ECD_04025 at 4287.329 kb on + strand, within ECD_04025 at 4287.359 kb on + strand, within ECD_04025 at 4287.359 kb on + strand, within ECD_04025 at 4287.417 kb on - strand, within ECD_04025 at 4287.483 kb on + strand, within ECD_04025 at 4287.491 kb on + strand, within ECD_04025 at 4287.491 kb on + strand, within ECD_04025 at 4287.492 kb on - strand, within ECD_04025 at 4287.514 kb on + strand, within ECD_04025 at 4287.514 kb on + strand, within ECD_04025 at 4287.514 kb on + strand, within ECD_04025 at 4287.514 kb on + strand, within ECD_04025 at 4287.515 kb on - strand, within ECD_04025 at 4287.515 kb on - strand, within ECD_04025 at 4287.515 kb on - strand, within ECD_04025 at 4287.515 kb on - strand, within ECD_04025 at 4287.524 kb on + strand at 4287.553 kb on + strand at 4287.554 kb on - strand at 4287.609 kb on + strand at 4287.664 kb on - strand at 4287.679 kb on - strand at 4287.682 kb on - strand at 4287.682 kb on - strand at 4287.816 kb on + strand, within ECD_04026 at 4287.817 kb on - strand, within ECD_04026 at 4287.840 kb on + strand, within ECD_04026 at 4287.840 kb on + strand, within ECD_04026 at 4287.881 kb on + strand, within ECD_04026 at 4287.882 kb on - strand, within ECD_04026 at 4287.882 kb on - strand, within ECD_04026 at 4287.996 kb on - strand, within ECD_04026 at 4287.996 kb on - strand, within ECD_04026 at 4287.996 kb on - strand, within ECD_04026 at 4287.996 kb on - strand, within ECD_04026 at 4287.996 kb on - strand, within ECD_04026 at 4288.278 kb on + strand, within ECD_04026 at 4288.325 kb on + strand, within ECD_04026 at 4288.379 kb on + strand, within ECD_04026 at 4288.379 kb on + strand, within ECD_04026 at 4288.379 kb on + strand, within ECD_04026 at 4288.380 kb on - strand, within ECD_04026 at 4288.380 kb on - strand, within ECD_04026 at 4288.380 kb on - strand, within ECD_04026 at 4288.548 kb on + strand, within ECD_04026 at 4288.549 kb on - strand, within ECD_04026 at 4288.549 kb on - strand, within ECD_04026 at 4288.549 kb on - strand, within ECD_04026 at 4288.549 kb on - strand, within ECD_04026 at 4288.550 kb on + strand, within ECD_04026 at 4288.551 kb on - strand, within ECD_04026 at 4288.551 kb on - strand, within ECD_04026 at 4288.551 kb on - strand, within ECD_04026 at 4288.551 kb on - strand, within ECD_04026 at 4288.749 kb on + strand, within ECD_04026 at 4288.790 kb on + strand, within ECD_04026 at 4288.989 kb on + strand, within ECD_04026 at 4288.989 kb on + strand, within ECD_04026 at 4288.989 kb on + strand, within ECD_04026 at 4288.990 kb on - strand, within ECD_04026 at 4289.005 kb on - strand, within ECD_04026 at 4289.022 kb on + strand, within ECD_04026 at 4289.265 kb on + strand at 4289.265 kb on + strand at 4289.290 kb on + strand at 4289.291 kb on - strand at 4289.341 kb on + strand at 4289.363 kb on - strand at 4289.442 kb on - strand at 4289.442 kb on - strand at 4289.473 kb on - strand at 4289.489 kb on - strand at 4289.490 kb on + strand at 4289.491 kb on - strand at 4289.494 kb on + strand at 4289.494 kb on + strand at 4289.495 kb on - strand at 4289.502 kb on + strand at 4289.502 kb on + strand at 4289.503 kb on - strand at 4289.504 kb on + strand at 4289.505 kb on - strand at 4289.505 kb on - strand at 4289.569 kb on - strand at 4289.569 kb on - strand at 4289.589 kb on + strand at 4289.597 kb on - strand at 4289.682 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 256 remove 4,286,773 - ECD_04024 0.81 +0.6 4,286,826 + +1.2 4,286,826 + +0.1 4,286,826 + -2.9 4,286,826 + +1.6 4,286,827 - -1.4 4,286,904 + -0.6 4,286,965 + ECD_04025 0.14 -0.5 4,286,978 + ECD_04025 0.16 +0.8 4,286,979 - ECD_04025 0.16 -0.2 4,286,989 - ECD_04025 0.18 -0.4 4,287,018 - ECD_04025 0.22 -1.8 4,287,029 + ECD_04025 0.23 +0.2 4,287,056 - ECD_04025 0.27 -0.7 4,287,056 - ECD_04025 0.27 -0.4 4,287,166 + ECD_04025 0.42 +0.8 4,287,167 - ECD_04025 0.42 -0.9 4,287,197 + ECD_04025 0.46 -0.1 4,287,198 - ECD_04025 0.46 -1.2 4,287,235 + ECD_04025 0.51 +1.5 4,287,235 + ECD_04025 0.51 +0.6 4,287,235 + ECD_04025 0.51 -1.8 4,287,236 - ECD_04025 0.51 +0.6 4,287,236 - ECD_04025 0.51 -0.3 4,287,276 - ECD_04025 0.57 -1.4 4,287,276 - ECD_04025 0.57 +1.6 4,287,308 + ECD_04025 0.61 +0.3 4,287,313 - ECD_04025 0.62 -1.4 4,287,329 + ECD_04025 0.64 -0.7 4,287,329 + ECD_04025 0.64 +0.1 4,287,359 + ECD_04025 0.68 +0.5 4,287,359 + ECD_04025 0.68 -1.1 4,287,417 - ECD_04025 0.76 +0.7 4,287,483 + ECD_04025 0.85 -1.5 4,287,491 + ECD_04025 0.86 +2.0 4,287,491 + ECD_04025 0.86 +0.2 4,287,492 - ECD_04025 0.86 -2.2 4,287,514 + ECD_04025 0.89 +0.6 4,287,514 + ECD_04025 0.89 -0.8 4,287,514 + ECD_04025 0.89 -0.4 4,287,514 + ECD_04025 0.89 -0.8 4,287,515 - ECD_04025 0.89 +0.1 4,287,515 - ECD_04025 0.89 +0.0 4,287,515 - ECD_04025 0.89 -1.0 4,287,515 - ECD_04025 0.89 -0.0 4,287,524 + +1.6 4,287,553 + -1.1 4,287,554 - -0.5 4,287,609 + -1.5 4,287,664 - +0.1 4,287,679 - +0.2 4,287,682 - +1.4 4,287,682 - +0.5 4,287,816 + ECD_04026 0.13 -0.3 4,287,817 - ECD_04026 0.13 -0.3 4,287,840 + ECD_04026 0.14 +2.2 4,287,840 + ECD_04026 0.14 +0.3 4,287,881 + ECD_04026 0.16 +0.0 4,287,882 - ECD_04026 0.16 +2.6 4,287,882 - ECD_04026 0.16 -0.1 4,287,996 - ECD_04026 0.23 +0.6 4,287,996 - ECD_04026 0.23 -0.1 4,287,996 - ECD_04026 0.23 -2.0 4,287,996 - ECD_04026 0.23 +0.2 4,287,996 - ECD_04026 0.23 -0.3 4,288,278 + ECD_04026 0.38 +0.5 4,288,325 + ECD_04026 0.41 -0.5 4,288,379 + ECD_04026 0.44 +1.1 4,288,379 + ECD_04026 0.44 +0.3 4,288,379 + ECD_04026 0.44 -1.3 4,288,380 - ECD_04026 0.44 -0.2 4,288,380 - ECD_04026 0.44 -0.7 4,288,380 - ECD_04026 0.44 -1.3 4,288,548 + ECD_04026 0.53 +0.6 4,288,549 - ECD_04026 0.53 -0.3 4,288,549 - ECD_04026 0.53 +0.5 4,288,549 - ECD_04026 0.53 +0.2 4,288,549 - ECD_04026 0.53 +5.7 4,288,550 + ECD_04026 0.53 -1.7 4,288,551 - ECD_04026 0.53 -0.3 4,288,551 - ECD_04026 0.53 -2.1 4,288,551 - ECD_04026 0.53 -0.0 4,288,551 - ECD_04026 0.53 +1.3 4,288,749 + ECD_04026 0.64 -0.1 4,288,790 + ECD_04026 0.67 +0.2 4,288,989 + ECD_04026 0.78 +2.1 4,288,989 + ECD_04026 0.78 -0.6 4,288,989 + ECD_04026 0.78 -1.0 4,288,990 - ECD_04026 0.78 -0.6 4,289,005 - ECD_04026 0.78 -0.1 4,289,022 + ECD_04026 0.79 -0.8 4,289,265 + -0.3 4,289,265 + +0.4 4,289,290 + -0.5 4,289,291 - -0.3 4,289,341 + -0.2 4,289,363 - -0.3 4,289,442 - +0.5 4,289,442 - +1.1 4,289,473 - -0.4 4,289,489 - -2.1 4,289,490 + -2.6 4,289,491 - +0.4 4,289,494 + +0.7 4,289,494 + +0.9 4,289,495 - +0.2 4,289,502 + -0.3 4,289,502 + -1.0 4,289,503 - +0.1 4,289,504 + -1.1 4,289,505 - +2.2 4,289,505 - +0.5 4,289,569 - -1.1 4,289,569 - +0.7 4,289,589 + -1.0 4,289,597 - +1.0 4,289,682 - +1.9
Or see this region's nucleotide sequence