Strain Fitness in Escherichia coli BL21 around ECD_03853

Experiment: Tailocin 256

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_r00018 and ECD_r00019 are separated by 92 nucleotidesECD_r00019 and ECD_03853 are separated by 132 nucleotidesECD_03853 and ECD_03854 overlap by 4 nucleotidesECD_03854 and ECD_03855 are separated by 28 nucleotides ECD_r00018: ECD_r00018 - 23S ribosomal RNA, at 4,076,856 to 4,079,763 _r00018 ECD_r00019: ECD_r00019 - 5S ribosomal RNA, at 4,079,856 to 4,079,975 _r00019 ECD_03853: ECD_03853 - UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding, at 4,080,108 to 4,081,136 _03853 ECD_03854: ECD_03854 - bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/ DNA-binding transcriptional repressor, bio-5'-AMP-binding, at 4,081,133 to 4,082,098 _03854 ECD_03855: ECD_03855 - pantothenate kinase, at 4,082,127 to 4,083,077 _03855 Position (kb) 4080 4081 4082Strain fitness (log2 ratio) -1 0 1at 4080.043 kb on + strandat 4080.043 kb on + strandat 4080.048 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Tailocin 256
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4,080,043 + +1.5
4,080,043 + -0.8
4,080,048 - -0.7

Or see this region's nucleotide sequence