Strain Fitness in Escherichia coli BL21 around ECD_03852

Experiment: Tailocin 256

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03852 and ECD_r00017 are separated by 373 nucleotides ECD_03852: ECD_03852 - glutamate racemase, at 4,073,729 to 4,074,586 _03852 ECD_r00017: ECD_r00017 - 16S ribosomal RNA, at 4,074,960 to 4,076,501 _r00017 Position (kb) 4073 4074 4075Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 4072.735 kb on + strandat 4072.736 kb on - strandat 4072.736 kb on - strandat 4072.783 kb on - strandat 4072.798 kb on - strandat 4072.804 kb on + strandat 4072.804 kb on + strandat 4072.804 kb on + strandat 4072.804 kb on + strandat 4072.804 kb on + strandat 4072.804 kb on + strandat 4072.804 kb on + strandat 4072.804 kb on + strandat 4072.804 kb on + strandat 4072.805 kb on - strandat 4072.805 kb on - strandat 4072.805 kb on - strandat 4072.806 kb on + strandat 4072.806 kb on + strandat 4072.807 kb on - strandat 4072.807 kb on - strandat 4072.807 kb on - strandat 4072.823 kb on - strandat 4072.828 kb on + strandat 4072.829 kb on - strandat 4072.829 kb on - strandat 4072.829 kb on - strandat 4072.829 kb on - strandat 4072.885 kb on + strandat 4072.885 kb on + strandat 4072.885 kb on + strandat 4072.885 kb on + strandat 4072.885 kb on + strandat 4072.886 kb on - strandat 4072.886 kb on - strandat 4072.926 kb on + strandat 4072.927 kb on - strandat 4072.963 kb on - strandat 4072.963 kb on - strandat 4072.981 kb on + strandat 4072.981 kb on + strandat 4072.982 kb on - strandat 4072.982 kb on - strandat 4072.996 kb on + strandat 4072.997 kb on - strandat 4073.007 kb on + strandat 4073.007 kb on + strandat 4073.008 kb on - strandat 4073.020 kb on + strandat 4073.020 kb on + strandat 4073.083 kb on - strandat 4073.176 kb on + strandat 4073.176 kb on + strandat 4073.178 kb on + strandat 4073.178 kb on + strandat 4073.178 kb on + strandat 4073.178 kb on + strandat 4073.178 kb on + strandat 4073.179 kb on - strandat 4073.179 kb on - strandat 4073.179 kb on - strandat 4073.203 kb on + strandat 4073.357 kb on - strandat 4073.359 kb on + strandat 4073.359 kb on + strandat 4073.360 kb on - strandat 4073.430 kb on + strandat 4073.430 kb on + strandat 4073.440 kb on + strandat 4073.441 kb on - strandat 4073.446 kb on + strandat 4073.446 kb on + strandat 4073.446 kb on + strandat 4073.446 kb on + strandat 4073.446 kb on + strandat 4073.447 kb on - strandat 4073.447 kb on - strandat 4073.487 kb on - strandat 4073.496 kb on + strandat 4073.497 kb on - strandat 4073.513 kb on - strandat 4073.534 kb on - strandat 4073.553 kb on + strandat 4073.553 kb on + strandat 4073.553 kb on + strandat 4073.553 kb on + strandat 4073.553 kb on + strandat 4073.553 kb on + strandat 4073.554 kb on - strandat 4073.554 kb on - strandat 4073.554 kb on - strandat 4073.554 kb on - strandat 4073.557 kb on + strandat 4073.557 kb on + strandat 4073.557 kb on + strandat 4073.557 kb on + strandat 4073.557 kb on + strandat 4073.558 kb on - strandat 4073.563 kb on + strandat 4073.564 kb on - strandat 4073.564 kb on - strandat 4073.568 kb on - strandat 4073.578 kb on + strandat 4073.590 kb on + strandat 4073.599 kb on + strandat 4073.599 kb on + strandat 4073.599 kb on + strandat 4073.599 kb on + strandat 4073.600 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Tailocin 256
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4,072,735 + -0.9
4,072,736 - -1.2
4,072,736 - +0.0
4,072,783 - +0.3
4,072,798 - -0.5
4,072,804 + -0.3
4,072,804 + -0.1
4,072,804 + -0.2
4,072,804 + -1.1
4,072,804 + +1.7
4,072,804 + +0.0
4,072,804 + +0.8
4,072,804 + +3.0
4,072,804 + -1.6
4,072,805 - +1.3
4,072,805 - -0.7
4,072,805 - -0.9
4,072,806 + +0.3
4,072,806 + +1.4
4,072,807 - -1.2
4,072,807 - -2.2
4,072,807 - +1.4
4,072,823 - +0.6
4,072,828 + +0.6
4,072,829 - -1.0
4,072,829 - -0.9
4,072,829 - -0.5
4,072,829 - +0.0
4,072,885 + +0.6
4,072,885 + +0.7
4,072,885 + -0.2
4,072,885 + -0.3
4,072,885 + +0.8
4,072,886 - +0.5
4,072,886 - -0.9
4,072,926 + +1.1
4,072,927 - -0.2
4,072,963 - -1.0
4,072,963 - +0.9
4,072,981 + -0.2
4,072,981 + -0.1
4,072,982 - -2.2
4,072,982 - +0.9
4,072,996 + -0.5
4,072,997 - -1.3
4,073,007 + +1.6
4,073,007 + +0.8
4,073,008 - -1.0
4,073,020 + -0.1
4,073,020 + -0.7
4,073,083 - -1.3
4,073,176 + -0.2
4,073,176 + -0.5
4,073,178 + +0.5
4,073,178 + -1.8
4,073,178 + -0.2
4,073,178 + -0.7
4,073,178 + -0.5
4,073,179 - -0.3
4,073,179 - +0.2
4,073,179 - -0.0
4,073,203 + +0.3
4,073,357 - -0.6
4,073,359 + -0.3
4,073,359 + +0.3
4,073,360 - -0.1
4,073,430 + -1.7
4,073,430 + -0.5
4,073,440 + -1.9
4,073,441 - +1.2
4,073,446 + -0.4
4,073,446 + +1.0
4,073,446 + -0.7
4,073,446 + +0.6
4,073,446 + -1.1
4,073,447 - -1.1
4,073,447 - -0.8
4,073,487 - -0.9
4,073,496 + -0.3
4,073,497 - -0.4
4,073,513 - +1.2
4,073,534 - +2.9
4,073,553 + -0.5
4,073,553 + +1.4
4,073,553 + -0.2
4,073,553 + +0.7
4,073,553 + -0.9
4,073,553 + +0.0
4,073,554 - -0.8
4,073,554 - -0.6
4,073,554 - +3.9
4,073,554 - +0.1
4,073,557 + +0.3
4,073,557 + -1.0
4,073,557 + +0.4
4,073,557 + +0.9
4,073,557 + +0.9
4,073,558 - -0.8
4,073,563 + -1.6
4,073,564 - +1.3
4,073,564 - -0.1
4,073,568 - +0.2
4,073,578 + -0.2
4,073,590 + -1.2
4,073,599 + -1.0
4,073,599 + -1.5
4,073,599 + +1.2
4,073,599 + -0.2
4,073,600 - -1.0

Or see this region's nucleotide sequence