Experiment: Tailocin 256
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03852 and ECD_r00017 are separated by 373 nucleotides
ECD_03852: ECD_03852 - glutamate racemase, at 4,073,729 to 4,074,586
_03852
ECD_r00017: ECD_r00017 - 16S ribosomal RNA, at 4,074,960 to 4,076,501
_r00017
Position (kb)
4073
4074
4075 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4072.735 kb on + strand at 4072.736 kb on - strand at 4072.736 kb on - strand at 4072.783 kb on - strand at 4072.798 kb on - strand at 4072.804 kb on + strand at 4072.804 kb on + strand at 4072.804 kb on + strand at 4072.804 kb on + strand at 4072.804 kb on + strand at 4072.804 kb on + strand at 4072.804 kb on + strand at 4072.804 kb on + strand at 4072.804 kb on + strand at 4072.805 kb on - strand at 4072.805 kb on - strand at 4072.805 kb on - strand at 4072.806 kb on + strand at 4072.806 kb on + strand at 4072.807 kb on - strand at 4072.807 kb on - strand at 4072.807 kb on - strand at 4072.823 kb on - strand at 4072.828 kb on + strand at 4072.829 kb on - strand at 4072.829 kb on - strand at 4072.829 kb on - strand at 4072.829 kb on - strand at 4072.885 kb on + strand at 4072.885 kb on + strand at 4072.885 kb on + strand at 4072.885 kb on + strand at 4072.885 kb on + strand at 4072.886 kb on - strand at 4072.886 kb on - strand at 4072.926 kb on + strand at 4072.927 kb on - strand at 4072.963 kb on - strand at 4072.963 kb on - strand at 4072.981 kb on + strand at 4072.981 kb on + strand at 4072.982 kb on - strand at 4072.982 kb on - strand at 4072.996 kb on + strand at 4072.997 kb on - strand at 4073.007 kb on + strand at 4073.007 kb on + strand at 4073.008 kb on - strand at 4073.020 kb on + strand at 4073.020 kb on + strand at 4073.083 kb on - strand at 4073.176 kb on + strand at 4073.176 kb on + strand at 4073.178 kb on + strand at 4073.178 kb on + strand at 4073.178 kb on + strand at 4073.178 kb on + strand at 4073.178 kb on + strand at 4073.179 kb on - strand at 4073.179 kb on - strand at 4073.179 kb on - strand at 4073.203 kb on + strand at 4073.357 kb on - strand at 4073.359 kb on + strand at 4073.359 kb on + strand at 4073.360 kb on - strand at 4073.430 kb on + strand at 4073.430 kb on + strand at 4073.440 kb on + strand at 4073.441 kb on - strand at 4073.446 kb on + strand at 4073.446 kb on + strand at 4073.446 kb on + strand at 4073.446 kb on + strand at 4073.446 kb on + strand at 4073.447 kb on - strand at 4073.447 kb on - strand at 4073.487 kb on - strand at 4073.496 kb on + strand at 4073.497 kb on - strand at 4073.513 kb on - strand at 4073.534 kb on - strand at 4073.553 kb on + strand at 4073.553 kb on + strand at 4073.553 kb on + strand at 4073.553 kb on + strand at 4073.553 kb on + strand at 4073.553 kb on + strand at 4073.554 kb on - strand at 4073.554 kb on - strand at 4073.554 kb on - strand at 4073.554 kb on - strand at 4073.557 kb on + strand at 4073.557 kb on + strand at 4073.557 kb on + strand at 4073.557 kb on + strand at 4073.557 kb on + strand at 4073.558 kb on - strand at 4073.563 kb on + strand at 4073.564 kb on - strand at 4073.564 kb on - strand at 4073.568 kb on - strand at 4073.578 kb on + strand at 4073.590 kb on + strand at 4073.599 kb on + strand at 4073.599 kb on + strand at 4073.599 kb on + strand at 4073.599 kb on + strand at 4073.600 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 256 remove 4,072,735 + -0.9 4,072,736 - -1.2 4,072,736 - +0.0 4,072,783 - +0.3 4,072,798 - -0.5 4,072,804 + -0.3 4,072,804 + -0.1 4,072,804 + -0.2 4,072,804 + -1.1 4,072,804 + +1.7 4,072,804 + +0.0 4,072,804 + +0.8 4,072,804 + +3.0 4,072,804 + -1.6 4,072,805 - +1.3 4,072,805 - -0.7 4,072,805 - -0.9 4,072,806 + +0.3 4,072,806 + +1.4 4,072,807 - -1.2 4,072,807 - -2.2 4,072,807 - +1.4 4,072,823 - +0.6 4,072,828 + +0.6 4,072,829 - -1.0 4,072,829 - -0.9 4,072,829 - -0.5 4,072,829 - +0.0 4,072,885 + +0.6 4,072,885 + +0.7 4,072,885 + -0.2 4,072,885 + -0.3 4,072,885 + +0.8 4,072,886 - +0.5 4,072,886 - -0.9 4,072,926 + +1.1 4,072,927 - -0.2 4,072,963 - -1.0 4,072,963 - +0.9 4,072,981 + -0.2 4,072,981 + -0.1 4,072,982 - -2.2 4,072,982 - +0.9 4,072,996 + -0.5 4,072,997 - -1.3 4,073,007 + +1.6 4,073,007 + +0.8 4,073,008 - -1.0 4,073,020 + -0.1 4,073,020 + -0.7 4,073,083 - -1.3 4,073,176 + -0.2 4,073,176 + -0.5 4,073,178 + +0.5 4,073,178 + -1.8 4,073,178 + -0.2 4,073,178 + -0.7 4,073,178 + -0.5 4,073,179 - -0.3 4,073,179 - +0.2 4,073,179 - -0.0 4,073,203 + +0.3 4,073,357 - -0.6 4,073,359 + -0.3 4,073,359 + +0.3 4,073,360 - -0.1 4,073,430 + -1.7 4,073,430 + -0.5 4,073,440 + -1.9 4,073,441 - +1.2 4,073,446 + -0.4 4,073,446 + +1.0 4,073,446 + -0.7 4,073,446 + +0.6 4,073,446 + -1.1 4,073,447 - -1.1 4,073,447 - -0.8 4,073,487 - -0.9 4,073,496 + -0.3 4,073,497 - -0.4 4,073,513 - +1.2 4,073,534 - +2.9 4,073,553 + -0.5 4,073,553 + +1.4 4,073,553 + -0.2 4,073,553 + +0.7 4,073,553 + -0.9 4,073,553 + +0.0 4,073,554 - -0.8 4,073,554 - -0.6 4,073,554 - +3.9 4,073,554 - +0.1 4,073,557 + +0.3 4,073,557 + -1.0 4,073,557 + +0.4 4,073,557 + +0.9 4,073,557 + +0.9 4,073,558 - -0.8 4,073,563 + -1.6 4,073,564 - +1.3 4,073,564 - -0.1 4,073,568 - +0.2 4,073,578 + -0.2 4,073,590 + -1.2 4,073,599 + -1.0 4,073,599 + -1.5 4,073,599 + +1.2 4,073,599 + -0.2 4,073,600 - -1.0
Or see this region's nucleotide sequence