Experiment: Tailocin 256
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03388 and ECD_03389 are separated by 375 nucleotides ECD_03389 and ECD_03390 are separated by 475 nucleotides ECD_03390 and ECD_03391 are separated by 29 nucleotides
ECD_03388: ECD_03388 - toxic polypeptide, small, at 3,561,651 to 3,561,758
_03388
ECD_03389: ECD_03389 - toxic polypeptide, small, at 3,562,134 to 3,562,241
_03389
ECD_03390: ECD_03390 - putative transporter, at 3,562,717 to 3,563,988
_03390
ECD_03391: ECD_03391 - dipeptide/heme ABC transporter ATPase, at 3,564,018 to 3,565,022
_03391
Position (kb)
3562
3563
3564 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3561.758 kb on + strand at 3561.760 kb on + strand at 3561.775 kb on + strand at 3561.803 kb on + strand at 3561.804 kb on - strand at 3561.849 kb on - strand at 3561.956 kb on - strand at 3562.258 kb on + strand at 3562.258 kb on + strand at 3562.258 kb on + strand at 3562.278 kb on + strand at 3562.332 kb on - strand at 3562.332 kb on - strand at 3562.332 kb on - strand at 3562.438 kb on + strand at 3562.438 kb on + strand at 3562.500 kb on - strand at 3562.628 kb on + strand at 3562.635 kb on + strand at 3562.716 kb on + strand at 3562.717 kb on - strand at 3562.769 kb on - strand at 3562.787 kb on + strand at 3562.787 kb on + strand at 3562.796 kb on + strand at 3562.796 kb on + strand at 3562.797 kb on - strand at 3562.951 kb on - strand, within ECD_03390 at 3562.957 kb on + strand, within ECD_03390 at 3562.957 kb on + strand, within ECD_03390 at 3562.957 kb on + strand, within ECD_03390 at 3562.958 kb on - strand, within ECD_03390 at 3562.969 kb on - strand, within ECD_03390 at 3562.969 kb on - strand, within ECD_03390 at 3562.969 kb on - strand, within ECD_03390 at 3563.137 kb on - strand, within ECD_03390 at 3563.189 kb on + strand, within ECD_03390 at 3563.228 kb on + strand, within ECD_03390 at 3563.286 kb on - strand, within ECD_03390 at 3563.332 kb on - strand, within ECD_03390 at 3563.360 kb on + strand, within ECD_03390 at 3563.361 kb on - strand, within ECD_03390 at 3563.365 kb on - strand, within ECD_03390 at 3563.373 kb on - strand, within ECD_03390 at 3563.373 kb on - strand, within ECD_03390 at 3563.376 kb on + strand, within ECD_03390 at 3563.388 kb on + strand, within ECD_03390 at 3563.395 kb on + strand, within ECD_03390 at 3563.420 kb on + strand, within ECD_03390 at 3563.458 kb on - strand, within ECD_03390 at 3563.458 kb on - strand, within ECD_03390 at 3563.458 kb on - strand, within ECD_03390 at 3563.458 kb on - strand, within ECD_03390 at 3563.458 kb on - strand, within ECD_03390 at 3563.461 kb on + strand, within ECD_03390 at 3563.462 kb on - strand, within ECD_03390 at 3563.462 kb on - strand, within ECD_03390 at 3563.462 kb on - strand, within ECD_03390 at 3563.462 kb on - strand, within ECD_03390 at 3563.463 kb on + strand, within ECD_03390 at 3563.464 kb on - strand, within ECD_03390 at 3563.505 kb on + strand, within ECD_03390 at 3563.554 kb on - strand, within ECD_03390 at 3563.595 kb on + strand, within ECD_03390 at 3563.595 kb on + strand, within ECD_03390 at 3563.625 kb on + strand, within ECD_03390 at 3563.626 kb on - strand, within ECD_03390 at 3563.626 kb on - strand, within ECD_03390 at 3563.626 kb on - strand, within ECD_03390 at 3563.660 kb on - strand, within ECD_03390 at 3563.660 kb on - strand, within ECD_03390 at 3563.716 kb on - strand, within ECD_03390 at 3563.778 kb on + strand, within ECD_03390 at 3563.778 kb on + strand, within ECD_03390 at 3563.778 kb on + strand, within ECD_03390 at 3563.843 kb on + strand, within ECD_03390 at 3563.844 kb on - strand, within ECD_03390 at 3563.845 kb on + strand, within ECD_03390 at 3563.845 kb on + strand, within ECD_03390 at 3563.845 kb on + strand, within ECD_03390 at 3563.846 kb on - strand, within ECD_03390 at 3563.846 kb on - strand, within ECD_03390 at 3563.846 kb on - strand, within ECD_03390 at 3563.846 kb on - strand, within ECD_03390 at 3563.846 kb on - strand, within ECD_03390 at 3563.851 kb on - strand, within ECD_03390 at 3563.851 kb on - strand, within ECD_03390 at 3563.884 kb on + strand at 3563.884 kb on + strand at 3563.941 kb on + strand at 3563.941 kb on + strand at 3563.954 kb on + strand at 3563.955 kb on - strand at 3563.986 kb on + strand at 3563.987 kb on - strand at 3564.084 kb on + strand at 3564.084 kb on + strand at 3564.084 kb on + strand at 3564.084 kb on + strand at 3564.085 kb on - strand at 3564.085 kb on - strand at 3564.085 kb on - strand at 3564.174 kb on + strand, within ECD_03391 at 3564.240 kb on + strand, within ECD_03391 at 3564.316 kb on + strand, within ECD_03391 at 3564.317 kb on - strand, within ECD_03391 at 3564.317 kb on - strand, within ECD_03391 at 3564.371 kb on + strand, within ECD_03391 at 3564.379 kb on + strand, within ECD_03391 at 3564.379 kb on + strand, within ECD_03391 at 3564.379 kb on + strand, within ECD_03391 at 3564.380 kb on - strand, within ECD_03391 at 3564.542 kb on + strand, within ECD_03391 at 3564.543 kb on - strand, within ECD_03391 at 3564.543 kb on - strand, within ECD_03391 at 3564.559 kb on + strand, within ECD_03391 at 3564.560 kb on - strand, within ECD_03391 at 3564.560 kb on - strand, within ECD_03391 at 3564.628 kb on - strand, within ECD_03391 at 3564.697 kb on + strand, within ECD_03391 at 3564.761 kb on + strand, within ECD_03391 at 3564.762 kb on - strand, within ECD_03391 at 3564.784 kb on + strand, within ECD_03391 at 3564.784 kb on + strand, within ECD_03391 at 3564.784 kb on + strand, within ECD_03391 at 3564.785 kb on - strand, within ECD_03391 at 3564.842 kb on + strand, within ECD_03391 at 3564.864 kb on + strand, within ECD_03391 at 3564.894 kb on - strand, within ECD_03391 at 3564.959 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 256 remove 3,561,758 + -1.0 3,561,760 + +1.4 3,561,775 + -0.3 3,561,803 + -0.5 3,561,804 - +0.6 3,561,849 - +0.8 3,561,956 - -1.4 3,562,258 + -0.1 3,562,258 + +0.4 3,562,258 + -0.1 3,562,278 + -0.5 3,562,332 - -0.7 3,562,332 - +0.4 3,562,332 - -0.2 3,562,438 + +0.2 3,562,438 + -0.5 3,562,500 - -0.0 3,562,628 + -1.3 3,562,635 + -0.4 3,562,716 + -1.6 3,562,717 - +0.2 3,562,769 - +0.5 3,562,787 + +0.4 3,562,787 + -1.2 3,562,796 + -0.8 3,562,796 + +2.0 3,562,797 - +0.7 3,562,951 - ECD_03390 0.18 +0.5 3,562,957 + ECD_03390 0.19 -0.1 3,562,957 + ECD_03390 0.19 -0.9 3,562,957 + ECD_03390 0.19 -0.4 3,562,958 - ECD_03390 0.19 -0.7 3,562,969 - ECD_03390 0.20 +0.5 3,562,969 - ECD_03390 0.20 -0.3 3,562,969 - ECD_03390 0.20 +0.4 3,563,137 - ECD_03390 0.33 +2.9 3,563,189 + ECD_03390 0.37 -0.2 3,563,228 + ECD_03390 0.40 -0.4 3,563,286 - ECD_03390 0.45 +0.6 3,563,332 - ECD_03390 0.48 +0.7 3,563,360 + ECD_03390 0.51 +0.4 3,563,361 - ECD_03390 0.51 -0.7 3,563,365 - ECD_03390 0.51 -0.7 3,563,373 - ECD_03390 0.52 +0.1 3,563,373 - ECD_03390 0.52 -2.0 3,563,376 + ECD_03390 0.52 -0.7 3,563,388 + ECD_03390 0.53 +0.8 3,563,395 + ECD_03390 0.53 +0.6 3,563,420 + ECD_03390 0.55 +1.0 3,563,458 - ECD_03390 0.58 -0.8 3,563,458 - ECD_03390 0.58 -0.9 3,563,458 - ECD_03390 0.58 +3.5 3,563,458 - ECD_03390 0.58 -0.7 3,563,458 - ECD_03390 0.58 +0.6 3,563,461 + ECD_03390 0.58 +0.2 3,563,462 - ECD_03390 0.59 -0.5 3,563,462 - ECD_03390 0.59 +1.4 3,563,462 - ECD_03390 0.59 -1.4 3,563,462 - ECD_03390 0.59 -0.3 3,563,463 + ECD_03390 0.59 -0.0 3,563,464 - ECD_03390 0.59 -2.3 3,563,505 + ECD_03390 0.62 -0.5 3,563,554 - ECD_03390 0.66 -0.4 3,563,595 + ECD_03390 0.69 +0.5 3,563,595 + ECD_03390 0.69 +1.1 3,563,625 + ECD_03390 0.71 -0.2 3,563,626 - ECD_03390 0.71 +0.9 3,563,626 - ECD_03390 0.71 +0.7 3,563,626 - ECD_03390 0.71 +0.5 3,563,660 - ECD_03390 0.74 +0.6 3,563,660 - ECD_03390 0.74 +0.6 3,563,716 - ECD_03390 0.79 +0.6 3,563,778 + ECD_03390 0.83 +0.8 3,563,778 + ECD_03390 0.83 +3.5 3,563,778 + ECD_03390 0.83 -0.5 3,563,843 + ECD_03390 0.89 -2.1 3,563,844 - ECD_03390 0.89 +1.4 3,563,845 + ECD_03390 0.89 +0.1 3,563,845 + ECD_03390 0.89 -0.9 3,563,845 + ECD_03390 0.89 +1.4 3,563,846 - ECD_03390 0.89 -1.4 3,563,846 - ECD_03390 0.89 -0.1 3,563,846 - ECD_03390 0.89 -0.3 3,563,846 - ECD_03390 0.89 +1.3 3,563,846 - ECD_03390 0.89 -2.4 3,563,851 - ECD_03390 0.89 +1.8 3,563,851 - ECD_03390 0.89 +1.1 3,563,884 + -1.6 3,563,884 + -2.3 3,563,941 + +0.2 3,563,941 + +0.5 3,563,954 + +0.3 3,563,955 - -0.2 3,563,986 + -1.7 3,563,987 - +0.7 3,564,084 + +0.0 3,564,084 + +0.2 3,564,084 + +0.0 3,564,084 + +1.4 3,564,085 - +0.0 3,564,085 - +0.4 3,564,085 - +0.7 3,564,174 + ECD_03391 0.16 +0.9 3,564,240 + ECD_03391 0.22 +0.7 3,564,316 + ECD_03391 0.30 -1.1 3,564,317 - ECD_03391 0.30 +1.0 3,564,317 - ECD_03391 0.30 -0.2 3,564,371 + ECD_03391 0.35 +0.1 3,564,379 + ECD_03391 0.36 +0.1 3,564,379 + ECD_03391 0.36 -1.5 3,564,379 + ECD_03391 0.36 -0.9 3,564,380 - ECD_03391 0.36 -1.0 3,564,542 + ECD_03391 0.52 -0.5 3,564,543 - ECD_03391 0.52 -0.6 3,564,543 - ECD_03391 0.52 -0.0 3,564,559 + ECD_03391 0.54 +0.2 3,564,560 - ECD_03391 0.54 -0.7 3,564,560 - ECD_03391 0.54 -0.5 3,564,628 - ECD_03391 0.61 +0.1 3,564,697 + ECD_03391 0.68 +0.6 3,564,761 + ECD_03391 0.74 -0.9 3,564,762 - ECD_03391 0.74 +0.1 3,564,784 + ECD_03391 0.76 +0.0 3,564,784 + ECD_03391 0.76 -2.1 3,564,784 + ECD_03391 0.76 +1.0 3,564,785 - ECD_03391 0.76 +0.0 3,564,842 + ECD_03391 0.82 -0.3 3,564,864 + ECD_03391 0.84 -0.3 3,564,894 - ECD_03391 0.87 +0.7 3,564,959 - -1.0
Or see this region's nucleotide sequence