Strain Fitness in Escherichia coli BL21 around ECD_03261

Experiment: Tailocin 256

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03259 and ECD_03260 are separated by 437 nucleotidesECD_03260 and ECD_03261 are separated by 16 nucleotidesECD_03261 and ECD_03262 overlap by 1 nucleotidesECD_03262 and ECD_03263 are separated by 202 nucleotides ECD_03259: ECD_03259 - putative transcriptional accessory protein, at 3,397,765 to 3,400,086 _03259 ECD_03260: ECD_03260 - ferrous iron transporter, protein A, at 3,400,524 to 3,400,751 _03260 ECD_03261: ECD_03261 - ferrous iron transporter protein B and GTP-binding protein; membrane protein, at 3,400,768 to 3,403,089 _03261 ECD_03262: ECD_03262 - putative DNA-binding transcriptional regulator, at 3,403,089 to 3,403,325 _03262 ECD_03263: ECD_03263 - transposase_31 family protein, at 3,403,528 to 3,404,406 _03263 Position (kb) 3400 3401 3402 3403 3404Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 3399.900 kb on + strandat 3399.906 kb on + strandat 3399.918 kb on + strandat 3400.161 kb on + strandat 3400.162 kb on - strandat 3400.162 kb on - strandat 3400.178 kb on - strandat 3400.212 kb on - strandat 3400.215 kb on - strandat 3400.215 kb on - strandat 3400.216 kb on + strandat 3400.217 kb on - strandat 3400.232 kb on - strandat 3400.300 kb on + strandat 3400.317 kb on - strandat 3400.317 kb on - strandat 3400.351 kb on + strandat 3400.429 kb on + strandat 3400.429 kb on + strandat 3400.489 kb on + strandat 3400.490 kb on - strandat 3400.490 kb on - strandat 3400.493 kb on + strandat 3400.501 kb on + strandat 3400.515 kb on + strandat 3400.515 kb on + strandat 3400.515 kb on + strandat 3400.516 kb on - strandat 3400.516 kb on - strandat 3400.516 kb on - strandat 3400.530 kb on + strandat 3400.530 kb on + strandat 3400.530 kb on + strandat 3400.530 kb on + strandat 3400.531 kb on - strandat 3400.531 kb on - strandat 3400.531 kb on - strandat 3400.531 kb on - strandat 3400.541 kb on + strandat 3400.542 kb on - strandat 3400.587 kb on + strand, within ECD_03260at 3400.618 kb on + strand, within ECD_03260at 3400.618 kb on + strand, within ECD_03260at 3400.619 kb on - strand, within ECD_03260at 3400.619 kb on - strand, within ECD_03260at 3400.634 kb on + strand, within ECD_03260at 3400.634 kb on + strand, within ECD_03260at 3400.699 kb on + strand, within ECD_03260at 3400.700 kb on - strand, within ECD_03260at 3400.702 kb on + strand, within ECD_03260at 3400.726 kb on + strand, within ECD_03260at 3400.727 kb on - strand, within ECD_03260at 3400.727 kb on - strand, within ECD_03260at 3400.749 kb on + strandat 3400.750 kb on - strandat 3400.752 kb on + strandat 3400.753 kb on - strandat 3400.753 kb on - strandat 3400.753 kb on - strandat 3400.785 kb on - strandat 3400.790 kb on + strandat 3400.790 kb on + strandat 3400.791 kb on - strandat 3400.823 kb on + strandat 3400.823 kb on + strandat 3400.823 kb on + strandat 3400.823 kb on + strandat 3400.856 kb on + strandat 3400.860 kb on + strandat 3400.860 kb on + strandat 3400.861 kb on - strandat 3400.861 kb on - strandat 3400.861 kb on - strandat 3400.888 kb on - strandat 3400.948 kb on + strandat 3400.948 kb on + strandat 3400.949 kb on - strandat 3400.949 kb on - strandat 3400.949 kb on - strandat 3401.005 kb on + strand, within ECD_03261at 3401.006 kb on - strand, within ECD_03261at 3401.055 kb on + strand, within ECD_03261at 3401.056 kb on - strand, within ECD_03261at 3401.074 kb on + strand, within ECD_03261at 3401.075 kb on - strand, within ECD_03261at 3401.084 kb on + strand, within ECD_03261at 3401.232 kb on + strand, within ECD_03261at 3401.264 kb on - strand, within ECD_03261at 3401.265 kb on + strand, within ECD_03261at 3401.296 kb on + strand, within ECD_03261at 3401.403 kb on + strand, within ECD_03261at 3401.407 kb on + strand, within ECD_03261at 3401.407 kb on + strand, within ECD_03261at 3401.407 kb on + strand, within ECD_03261at 3401.408 kb on - strand, within ECD_03261at 3401.408 kb on - strand, within ECD_03261at 3401.470 kb on - strand, within ECD_03261at 3401.543 kb on + strand, within ECD_03261at 3401.543 kb on + strand, within ECD_03261at 3401.543 kb on + strand, within ECD_03261at 3401.544 kb on - strand, within ECD_03261at 3401.588 kb on + strand, within ECD_03261at 3401.588 kb on + strand, within ECD_03261at 3401.589 kb on - strand, within ECD_03261at 3401.589 kb on - strand, within ECD_03261at 3401.592 kb on + strand, within ECD_03261at 3401.644 kb on + strand, within ECD_03261at 3401.644 kb on + strand, within ECD_03261at 3401.644 kb on + strand, within ECD_03261at 3401.645 kb on - strand, within ECD_03261at 3401.645 kb on - strand, within ECD_03261at 3401.775 kb on + strand, within ECD_03261at 3401.808 kb on + strand, within ECD_03261at 3401.849 kb on - strand, within ECD_03261at 3401.882 kb on - strand, within ECD_03261at 3401.882 kb on - strand, within ECD_03261at 3401.882 kb on - strand, within ECD_03261at 3401.883 kb on + strand, within ECD_03261at 3401.976 kb on + strand, within ECD_03261at 3401.976 kb on + strand, within ECD_03261at 3401.977 kb on - strand, within ECD_03261at 3401.977 kb on - strand, within ECD_03261at 3401.977 kb on - strand, within ECD_03261at 3401.977 kb on - strand, within ECD_03261at 3401.981 kb on + strand, within ECD_03261at 3402.003 kb on + strand, within ECD_03261at 3402.003 kb on + strand, within ECD_03261at 3402.003 kb on + strand, within ECD_03261at 3402.003 kb on + strand, within ECD_03261at 3402.003 kb on + strand, within ECD_03261at 3402.004 kb on - strand, within ECD_03261at 3402.004 kb on - strand, within ECD_03261at 3402.004 kb on - strand, within ECD_03261at 3402.004 kb on - strand, within ECD_03261at 3402.054 kb on + strand, within ECD_03261at 3402.054 kb on + strand, within ECD_03261at 3402.054 kb on + strand, within ECD_03261at 3402.055 kb on - strand, within ECD_03261at 3402.142 kb on + strand, within ECD_03261at 3402.142 kb on + strand, within ECD_03261at 3402.142 kb on + strand, within ECD_03261at 3402.142 kb on + strand, within ECD_03261at 3402.143 kb on - strand, within ECD_03261at 3402.144 kb on + strand, within ECD_03261at 3402.144 kb on + strand, within ECD_03261at 3402.145 kb on - strand, within ECD_03261at 3402.145 kb on - strand, within ECD_03261at 3402.190 kb on + strand, within ECD_03261at 3402.190 kb on + strand, within ECD_03261at 3402.190 kb on + strand, within ECD_03261at 3402.191 kb on - strand, within ECD_03261at 3402.191 kb on - strand, within ECD_03261at 3402.191 kb on - strand, within ECD_03261at 3402.241 kb on + strand, within ECD_03261at 3402.241 kb on + strand, within ECD_03261at 3402.242 kb on - strand, within ECD_03261at 3402.242 kb on - strand, within ECD_03261at 3402.242 kb on - strand, within ECD_03261at 3402.248 kb on + strand, within ECD_03261at 3402.248 kb on + strand, within ECD_03261at 3402.248 kb on + strand, within ECD_03261at 3402.249 kb on - strand, within ECD_03261at 3402.249 kb on - strand, within ECD_03261at 3402.258 kb on + strand, within ECD_03261at 3402.465 kb on + strand, within ECD_03261at 3402.657 kb on + strand, within ECD_03261at 3402.662 kb on + strand, within ECD_03261at 3402.662 kb on + strand, within ECD_03261at 3402.760 kb on + strand, within ECD_03261at 3402.760 kb on + strand, within ECD_03261at 3402.761 kb on - strand, within ECD_03261at 3402.767 kb on - strand, within ECD_03261at 3402.787 kb on + strand, within ECD_03261at 3402.787 kb on + strand, within ECD_03261at 3402.788 kb on - strand, within ECD_03261at 3402.788 kb on - strand, within ECD_03261at 3402.788 kb on - strand, within ECD_03261at 3402.788 kb on - strand, within ECD_03261at 3402.791 kb on + strand, within ECD_03261at 3402.791 kb on + strand, within ECD_03261at 3402.791 kb on + strand, within ECD_03261at 3402.791 kb on + strand, within ECD_03261at 3402.791 kb on + strand, within ECD_03261at 3402.791 kb on + strand, within ECD_03261at 3402.791 kb on + strand, within ECD_03261at 3402.791 kb on + strand, within ECD_03261at 3402.791 kb on + strand, within ECD_03261at 3402.791 kb on + strand, within ECD_03261at 3402.792 kb on - strand, within ECD_03261at 3402.792 kb on - strand, within ECD_03261at 3402.792 kb on - strand, within ECD_03261at 3402.792 kb on - strand, within ECD_03261at 3402.798 kb on + strand, within ECD_03261at 3402.798 kb on + strand, within ECD_03261at 3402.798 kb on + strand, within ECD_03261at 3402.799 kb on - strand, within ECD_03261at 3402.799 kb on - strand, within ECD_03261at 3402.902 kb on - strandat 3402.916 kb on + strandat 3402.916 kb on + strandat 3402.934 kb on + strandat 3402.977 kb on + strandat 3403.100 kb on + strandat 3403.100 kb on + strandat 3403.108 kb on + strandat 3403.153 kb on + strand, within ECD_03262at 3403.154 kb on - strand, within ECD_03262at 3403.272 kb on - strand, within ECD_03262at 3403.330 kb on - strandat 3403.358 kb on + strandat 3403.425 kb on + strandat 3403.426 kb on - strandat 3403.426 kb on - strandat 3403.491 kb on - strandat 3403.651 kb on - strand, within ECD_03263at 3403.753 kb on + strand, within ECD_03263at 3403.754 kb on - strand, within ECD_03263at 3403.754 kb on - strand, within ECD_03263at 3403.754 kb on - strand, within ECD_03263at 3403.754 kb on - strand, within ECD_03263at 3403.759 kb on + strand, within ECD_03263at 3403.759 kb on + strand, within ECD_03263at 3403.760 kb on - strand, within ECD_03263at 3403.760 kb on - strand, within ECD_03263at 3403.760 kb on - strand, within ECD_03263at 3403.760 kb on - strand, within ECD_03263at 3403.760 kb on - strand, within ECD_03263at 3403.895 kb on - strand, within ECD_03263at 3403.921 kb on + strand, within ECD_03263at 3403.976 kb on - strand, within ECD_03263at 3404.043 kb on + strand, within ECD_03263at 3404.043 kb on + strand, within ECD_03263at 3404.043 kb on + strand, within ECD_03263at 3404.043 kb on + strand, within ECD_03263at 3404.044 kb on - strand, within ECD_03263at 3404.060 kb on + strand, within ECD_03263at 3404.073 kb on + strand, within ECD_03263at 3404.074 kb on - strand, within ECD_03263

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Per-strain Table

Position Strand Gene LocusTag Fraction Tailocin 256
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3,399,900 + -1.7
3,399,906 + -0.6
3,399,918 + -1.6
3,400,161 + -0.6
3,400,162 - +0.2
3,400,162 - +0.4
3,400,178 - -1.3
3,400,212 - -0.9
3,400,215 - +6.4
3,400,215 - +0.1
3,400,216 + -1.9
3,400,217 - -1.4
3,400,232 - +0.2
3,400,300 + -2.5
3,400,317 - -0.5
3,400,317 - -3.1
3,400,351 + -2.4
3,400,429 + -0.5
3,400,429 + -1.4
3,400,489 + -2.1
3,400,490 - +2.4
3,400,490 - +2.0
3,400,493 + +1.2
3,400,501 + +0.7
3,400,515 + +0.5
3,400,515 + +1.0
3,400,515 + +2.3
3,400,516 - +2.9
3,400,516 - +3.2
3,400,516 - +3.2
3,400,530 + +1.2
3,400,530 + +2.7
3,400,530 + +0.6
3,400,530 + +1.6
3,400,531 - +3.4
3,400,531 - +2.3
3,400,531 - +2.3
3,400,531 - +3.0
3,400,541 + +1.9
3,400,542 - +2.4
3,400,587 + ECD_03260 0.28 +3.3
3,400,618 + ECD_03260 0.41 +1.5
3,400,618 + ECD_03260 0.41 +2.8
3,400,619 - ECD_03260 0.42 +2.7
3,400,619 - ECD_03260 0.42 +2.7
3,400,634 + ECD_03260 0.48 +1.9
3,400,634 + ECD_03260 0.48 +1.9
3,400,699 + ECD_03260 0.77 +2.8
3,400,700 - ECD_03260 0.77 +2.8
3,400,702 + ECD_03260 0.78 +2.5
3,400,726 + ECD_03260 0.89 +0.9
3,400,727 - ECD_03260 0.89 +2.5
3,400,727 - ECD_03260 0.89 +3.3
3,400,749 + -1.5
3,400,750 - +2.4
3,400,752 + +0.8
3,400,753 - +3.1
3,400,753 - +3.1
3,400,753 - +2.5
3,400,785 - +2.7
3,400,790 + +1.9
3,400,790 + +2.1
3,400,791 - +1.9
3,400,823 + +1.9
3,400,823 + +1.7
3,400,823 + +2.7
3,400,823 + +1.3
3,400,856 + +2.7
3,400,860 + +2.2
3,400,860 + +1.5
3,400,861 - +2.4
3,400,861 - +2.8
3,400,861 - +1.6
3,400,888 - +3.0
3,400,948 + +2.3
3,400,948 + +3.2
3,400,949 - +2.2
3,400,949 - +1.5
3,400,949 - +3.1
3,401,005 + ECD_03261 0.10 +2.2
3,401,006 - ECD_03261 0.10 +2.2
3,401,055 + ECD_03261 0.12 +3.2
3,401,056 - ECD_03261 0.12 +2.8
3,401,074 + ECD_03261 0.13 +2.0
3,401,075 - ECD_03261 0.13 +2.1
3,401,084 + ECD_03261 0.14 +1.7
3,401,232 + ECD_03261 0.20 +1.7
3,401,264 - ECD_03261 0.21 +3.1
3,401,265 + ECD_03261 0.21 +2.4
3,401,296 + ECD_03261 0.23 +1.7
3,401,403 + ECD_03261 0.27 +2.5
3,401,407 + ECD_03261 0.28 +1.6
3,401,407 + ECD_03261 0.28 +2.0
3,401,407 + ECD_03261 0.28 +1.1
3,401,408 - ECD_03261 0.28 +1.9
3,401,408 - ECD_03261 0.28 +2.8
3,401,470 - ECD_03261 0.30 +1.8
3,401,543 + ECD_03261 0.33 +4.4
3,401,543 + ECD_03261 0.33 +2.6
3,401,543 + ECD_03261 0.33 +2.3
3,401,544 - ECD_03261 0.33 +1.7
3,401,588 + ECD_03261 0.35 +0.9
3,401,588 + ECD_03261 0.35 +2.9
3,401,589 - ECD_03261 0.35 +2.1
3,401,589 - ECD_03261 0.35 +2.9
3,401,592 + ECD_03261 0.35 +3.0
3,401,644 + ECD_03261 0.38 +2.1
3,401,644 + ECD_03261 0.38 +2.4
3,401,644 + ECD_03261 0.38 +2.9
3,401,645 - ECD_03261 0.38 +1.8
3,401,645 - ECD_03261 0.38 +2.5
3,401,775 + ECD_03261 0.43 +2.4
3,401,808 + ECD_03261 0.45 +2.8
3,401,849 - ECD_03261 0.47 +3.7
3,401,882 - ECD_03261 0.48 +2.2
3,401,882 - ECD_03261 0.48 +0.7
3,401,882 - ECD_03261 0.48 +5.2
3,401,883 + ECD_03261 0.48 +2.4
3,401,976 + ECD_03261 0.52 +3.0
3,401,976 + ECD_03261 0.52 +2.2
3,401,977 - ECD_03261 0.52 +3.2
3,401,977 - ECD_03261 0.52 +2.1
3,401,977 - ECD_03261 0.52 +2.8
3,401,977 - ECD_03261 0.52 +1.2
3,401,981 + ECD_03261 0.52 +2.7
3,402,003 + ECD_03261 0.53 +1.4
3,402,003 + ECD_03261 0.53 +2.9
3,402,003 + ECD_03261 0.53 -0.6
3,402,003 + ECD_03261 0.53 +2.5
3,402,003 + ECD_03261 0.53 +2.0
3,402,004 - ECD_03261 0.53 +3.0
3,402,004 - ECD_03261 0.53 +2.4
3,402,004 - ECD_03261 0.53 +3.6
3,402,004 - ECD_03261 0.53 -2.4
3,402,054 + ECD_03261 0.55 +2.2
3,402,054 + ECD_03261 0.55 +5.4
3,402,054 + ECD_03261 0.55 +3.2
3,402,055 - ECD_03261 0.55 +2.7
3,402,142 + ECD_03261 0.59 +2.2
3,402,142 + ECD_03261 0.59 +3.1
3,402,142 + ECD_03261 0.59 +2.2
3,402,142 + ECD_03261 0.59 +2.9
3,402,143 - ECD_03261 0.59 +2.9
3,402,144 + ECD_03261 0.59 +0.7
3,402,144 + ECD_03261 0.59 +2.8
3,402,145 - ECD_03261 0.59 +3.2
3,402,145 - ECD_03261 0.59 +2.2
3,402,190 + ECD_03261 0.61 +2.6
3,402,190 + ECD_03261 0.61 +3.4
3,402,190 + ECD_03261 0.61 +1.8
3,402,191 - ECD_03261 0.61 +1.8
3,402,191 - ECD_03261 0.61 +3.0
3,402,191 - ECD_03261 0.61 +3.1
3,402,241 + ECD_03261 0.63 +2.6
3,402,241 + ECD_03261 0.63 +3.1
3,402,242 - ECD_03261 0.63 +2.9
3,402,242 - ECD_03261 0.63 +2.0
3,402,242 - ECD_03261 0.63 +2.7
3,402,248 + ECD_03261 0.64 +2.3
3,402,248 + ECD_03261 0.64 +0.9
3,402,248 + ECD_03261 0.64 +2.3
3,402,249 - ECD_03261 0.64 +1.6
3,402,249 - ECD_03261 0.64 +2.7
3,402,258 + ECD_03261 0.64 +0.6
3,402,465 + ECD_03261 0.73 +2.3
3,402,657 + ECD_03261 0.81 +2.5
3,402,662 + ECD_03261 0.82 +2.9
3,402,662 + ECD_03261 0.82 +2.1
3,402,760 + ECD_03261 0.86 +2.1
3,402,760 + ECD_03261 0.86 +2.7
3,402,761 - ECD_03261 0.86 +4.8
3,402,767 - ECD_03261 0.86 +3.4
3,402,787 + ECD_03261 0.87 +2.3
3,402,787 + ECD_03261 0.87 +2.4
3,402,788 - ECD_03261 0.87 +2.0
3,402,788 - ECD_03261 0.87 +1.6
3,402,788 - ECD_03261 0.87 +2.2
3,402,788 - ECD_03261 0.87 +1.7
3,402,791 + ECD_03261 0.87 +2.2
3,402,791 + ECD_03261 0.87 +1.9
3,402,791 + ECD_03261 0.87 +4.8
3,402,791 + ECD_03261 0.87 +2.8
3,402,791 + ECD_03261 0.87 +2.2
3,402,791 + ECD_03261 0.87 +2.4
3,402,791 + ECD_03261 0.87 +1.6
3,402,791 + ECD_03261 0.87 +3.2
3,402,791 + ECD_03261 0.87 +1.2
3,402,791 + ECD_03261 0.87 +2.7
3,402,792 - ECD_03261 0.87 +3.5
3,402,792 - ECD_03261 0.87 +2.1
3,402,792 - ECD_03261 0.87 +2.1
3,402,792 - ECD_03261 0.87 +3.4
3,402,798 + ECD_03261 0.87 +2.2
3,402,798 + ECD_03261 0.87 +2.5
3,402,798 + ECD_03261 0.87 +2.8
3,402,799 - ECD_03261 0.87 +2.1
3,402,799 - ECD_03261 0.87 +2.9
3,402,902 - +2.9
3,402,916 + +1.3
3,402,916 + +3.2
3,402,934 + +3.2
3,402,977 + +0.2
3,403,100 + +1.2
3,403,100 + +1.7
3,403,108 + +1.8
3,403,153 + ECD_03262 0.27 +2.7
3,403,154 - ECD_03262 0.27 +1.9
3,403,272 - ECD_03262 0.77 +2.2
3,403,330 - +1.4
3,403,358 + +0.3
3,403,425 + -1.8
3,403,426 - +0.8
3,403,426 - -0.3
3,403,491 - -0.5
3,403,651 - ECD_03263 0.14 +0.4
3,403,753 + ECD_03263 0.26 -1.4
3,403,754 - ECD_03263 0.26 +1.0
3,403,754 - ECD_03263 0.26 +1.0
3,403,754 - ECD_03263 0.26 +2.3
3,403,754 - ECD_03263 0.26 -1.4
3,403,759 + ECD_03263 0.26 -1.9
3,403,759 + ECD_03263 0.26 +3.5
3,403,760 - ECD_03263 0.26 -0.2
3,403,760 - ECD_03263 0.26 -0.1
3,403,760 - ECD_03263 0.26 -2.2
3,403,760 - ECD_03263 0.26 +0.5
3,403,760 - ECD_03263 0.26 -2.3
3,403,895 - ECD_03263 0.42 +0.7
3,403,921 + ECD_03263 0.45 +0.5
3,403,976 - ECD_03263 0.51 -0.4
3,404,043 + ECD_03263 0.59 +0.3
3,404,043 + ECD_03263 0.59 -0.7
3,404,043 + ECD_03263 0.59 +0.3
3,404,043 + ECD_03263 0.59 -0.5
3,404,044 - ECD_03263 0.59 +1.2
3,404,060 + ECD_03263 0.61 -0.3
3,404,073 + ECD_03263 0.62 -0.6
3,404,074 - ECD_03263 0.62 +0.1

Or see this region's nucleotide sequence