Experiment: Tailocin 256
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03246 and ECD_03247 overlap by 1 nucleotides ECD_03247 and ECD_03248 are separated by 119 nucleotides ECD_03248 and ECD_03249 are separated by 167 nucleotides
ECD_03246: ECD_03246 - DNA catabolic putative fimbrial assembly protein, at 3,381,811 to 3,382,350
_03246
ECD_03247: ECD_03247 - DNA catabolic putative pilus assembly protein, at 3,382,350 to 3,383,129
_03247
ECD_03248: ECD_03248 - penicillin-binding protein 1a, murein transglycosylase and transpeptidase, at 3,383,249 to 3,385,801
_03248
ECD_03249: ECD_03249 - adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP-ribose/NADH hydrolase, at 3,385,969 to 3,386,529
_03249
Position (kb)
3383
3384
3385
3386 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 3382.355 kb on - strand at 3382.467 kb on + strand, within ECD_03247 at 3382.467 kb on + strand, within ECD_03247 at 3382.618 kb on - strand, within ECD_03247 at 3382.697 kb on + strand, within ECD_03247 at 3382.698 kb on - strand, within ECD_03247 at 3382.739 kb on + strand, within ECD_03247 at 3382.740 kb on - strand, within ECD_03247 at 3382.741 kb on + strand, within ECD_03247 at 3382.741 kb on + strand, within ECD_03247 at 3382.742 kb on - strand, within ECD_03247 at 3382.742 kb on - strand, within ECD_03247 at 3382.769 kb on - strand, within ECD_03247 at 3382.884 kb on + strand, within ECD_03247 at 3382.913 kb on + strand, within ECD_03247 at 3382.913 kb on + strand, within ECD_03247 at 3382.913 kb on + strand, within ECD_03247 at 3382.913 kb on + strand, within ECD_03247 at 3382.914 kb on - strand, within ECD_03247 at 3382.914 kb on - strand, within ECD_03247 at 3382.914 kb on - strand, within ECD_03247 at 3382.950 kb on + strand, within ECD_03247 at 3382.950 kb on + strand, within ECD_03247 at 3382.951 kb on - strand, within ECD_03247 at 3382.961 kb on + strand, within ECD_03247 at 3383.001 kb on - strand, within ECD_03247 at 3383.094 kb on + strand at 3383.094 kb on + strand at 3383.094 kb on + strand at 3383.094 kb on + strand at 3383.167 kb on - strand at 3383.167 kb on - strand at 3383.168 kb on + strand at 3383.169 kb on - strand at 3383.191 kb on + strand at 3383.192 kb on - strand at 3383.192 kb on - strand at 3383.192 kb on - strand at 3383.192 kb on - strand at 3383.193 kb on + strand at 3383.194 kb on - strand at 3383.194 kb on - strand at 3383.194 kb on - strand at 3383.194 kb on - strand at 3383.194 kb on - strand at 3383.213 kb on + strand at 3383.232 kb on + strand at 3383.259 kb on + strand at 3383.265 kb on - strand at 3383.315 kb on + strand at 3383.322 kb on + strand at 3383.322 kb on + strand at 3383.322 kb on + strand at 3383.323 kb on - strand at 3383.323 kb on - strand at 3383.323 kb on - strand at 3383.324 kb on + strand at 3383.365 kb on - strand at 3383.455 kb on + strand at 3383.519 kb on + strand, within ECD_03248 at 3383.519 kb on + strand, within ECD_03248 at 3383.519 kb on + strand, within ECD_03248 at 3383.605 kb on + strand, within ECD_03248 at 3383.605 kb on + strand, within ECD_03248 at 3383.605 kb on + strand, within ECD_03248 at 3383.606 kb on - strand, within ECD_03248 at 3383.606 kb on - strand, within ECD_03248 at 3383.665 kb on + strand, within ECD_03248 at 3383.672 kb on - strand, within ECD_03248 at 3383.735 kb on + strand, within ECD_03248 at 3383.736 kb on - strand, within ECD_03248 at 3383.750 kb on + strand, within ECD_03248 at 3383.768 kb on + strand, within ECD_03248 at 3383.768 kb on + strand, within ECD_03248 at 3383.769 kb on - strand, within ECD_03248 at 3383.796 kb on - strand, within ECD_03248 at 3383.796 kb on - strand, within ECD_03248 at 3383.796 kb on - strand, within ECD_03248 at 3383.886 kb on - strand, within ECD_03248 at 3383.948 kb on + strand, within ECD_03248 at 3383.948 kb on + strand, within ECD_03248 at 3383.948 kb on + strand, within ECD_03248 at 3383.948 kb on + strand, within ECD_03248 at 3383.948 kb on + strand, within ECD_03248 at 3383.949 kb on - strand, within ECD_03248 at 3383.949 kb on - strand, within ECD_03248 at 3383.950 kb on + strand, within ECD_03248 at 3383.951 kb on - strand, within ECD_03248 at 3383.951 kb on - strand, within ECD_03248 at 3383.993 kb on - strand, within ECD_03248 at 3384.002 kb on + strand, within ECD_03248 at 3384.003 kb on - strand, within ECD_03248 at 3384.065 kb on + strand, within ECD_03248 at 3384.065 kb on + strand, within ECD_03248 at 3384.065 kb on + strand, within ECD_03248 at 3384.065 kb on + strand, within ECD_03248 at 3384.066 kb on - strand, within ECD_03248 at 3384.066 kb on - strand, within ECD_03248 at 3384.066 kb on - strand, within ECD_03248 at 3384.066 kb on - strand, within ECD_03248 at 3384.066 kb on - strand, within ECD_03248 at 3384.066 kb on - strand, within ECD_03248 at 3384.089 kb on + strand, within ECD_03248 at 3384.110 kb on + strand, within ECD_03248 at 3384.110 kb on + strand, within ECD_03248 at 3384.110 kb on + strand, within ECD_03248 at 3384.111 kb on - strand, within ECD_03248 at 3384.156 kb on + strand, within ECD_03248 at 3384.157 kb on - strand, within ECD_03248 at 3384.160 kb on + strand, within ECD_03248 at 3384.160 kb on + strand, within ECD_03248 at 3384.161 kb on - strand, within ECD_03248 at 3384.161 kb on - strand, within ECD_03248 at 3384.161 kb on - strand, within ECD_03248 at 3384.163 kb on + strand, within ECD_03248 at 3384.164 kb on - strand, within ECD_03248 at 3384.164 kb on - strand, within ECD_03248 at 3384.176 kb on + strand, within ECD_03248 at 3384.176 kb on + strand, within ECD_03248 at 3384.176 kb on + strand, within ECD_03248 at 3384.176 kb on + strand, within ECD_03248 at 3384.284 kb on + strand, within ECD_03248 at 3384.284 kb on + strand, within ECD_03248 at 3384.284 kb on + strand, within ECD_03248 at 3384.284 kb on + strand, within ECD_03248 at 3384.284 kb on + strand, within ECD_03248 at 3384.284 kb on + strand, within ECD_03248 at 3384.284 kb on + strand, within ECD_03248 at 3384.436 kb on + strand, within ECD_03248 at 3384.437 kb on - strand, within ECD_03248 at 3384.662 kb on + strand, within ECD_03248 at 3384.663 kb on - strand, within ECD_03248 at 3384.700 kb on + strand, within ECD_03248 at 3384.700 kb on + strand, within ECD_03248 at 3384.700 kb on + strand, within ECD_03248 at 3384.700 kb on + strand, within ECD_03248 at 3384.700 kb on + strand, within ECD_03248 at 3384.700 kb on + strand, within ECD_03248 at 3384.700 kb on + strand, within ECD_03248 at 3384.701 kb on - strand, within ECD_03248 at 3384.701 kb on - strand, within ECD_03248 at 3384.701 kb on - strand, within ECD_03248 at 3384.701 kb on - strand, within ECD_03248 at 3384.701 kb on - strand, within ECD_03248 at 3384.779 kb on + strand, within ECD_03248 at 3384.780 kb on - strand, within ECD_03248 at 3385.021 kb on + strand, within ECD_03248 at 3385.021 kb on + strand, within ECD_03248 at 3385.021 kb on + strand, within ECD_03248 at 3385.096 kb on + strand, within ECD_03248 at 3385.109 kb on + strand, within ECD_03248 at 3385.109 kb on + strand, within ECD_03248 at 3385.110 kb on - strand, within ECD_03248 at 3385.117 kb on + strand, within ECD_03248 at 3385.118 kb on - strand, within ECD_03248 at 3385.118 kb on - strand, within ECD_03248 at 3385.166 kb on - strand, within ECD_03248 at 3385.257 kb on - strand, within ECD_03248 at 3385.298 kb on - strand, within ECD_03248 at 3385.318 kb on + strand, within ECD_03248 at 3385.319 kb on - strand, within ECD_03248 at 3385.319 kb on - strand, within ECD_03248 at 3385.319 kb on - strand, within ECD_03248 at 3385.439 kb on + strand, within ECD_03248 at 3385.493 kb on - strand, within ECD_03248 at 3385.504 kb on + strand, within ECD_03248 at 3385.526 kb on - strand, within ECD_03248 at 3385.586 kb on + strand at 3385.586 kb on + strand at 3385.586 kb on + strand at 3385.587 kb on - strand at 3385.587 kb on - strand at 3385.587 kb on - strand at 3385.588 kb on + strand at 3385.589 kb on - strand at 3385.589 kb on - strand at 3385.680 kb on + strand at 3385.680 kb on + strand at 3385.680 kb on + strand at 3385.681 kb on - strand at 3385.684 kb on + strand at 3385.685 kb on - strand at 3385.911 kb on - strand at 3385.913 kb on - strand at 3385.963 kb on - strand at 3385.971 kb on - strand at 3385.971 kb on - strand at 3386.025 kb on + strand, within ECD_03249 at 3386.026 kb on - strand, within ECD_03249 at 3386.026 kb on - strand, within ECD_03249 at 3386.026 kb on - strand, within ECD_03249 at 3386.415 kb on - strand, within ECD_03249 at 3386.539 kb on + strand at 3386.539 kb on + strand at 3386.539 kb on + strand at 3386.539 kb on + strand at 3386.539 kb on + strand at 3386.539 kb on + strand at 3386.540 kb on - strand at 3386.540 kb on - strand at 3386.540 kb on - strand at 3386.540 kb on - strand at 3386.540 kb on - strand at 3386.624 kb on - strand at 3386.690 kb on + strand at 3386.713 kb on + strand at 3386.714 kb on - strand at 3386.740 kb on + strand at 3386.794 kb on + strand at 3386.794 kb on + strand at 3386.795 kb on - strand at 3386.795 kb on - strand at 3386.795 kb on - strand at 3386.795 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 256 remove 3,382,355 - -0.7 3,382,467 + ECD_03247 0.15 -0.2 3,382,467 + ECD_03247 0.15 +0.3 3,382,618 - ECD_03247 0.34 +0.4 3,382,697 + ECD_03247 0.44 +0.5 3,382,698 - ECD_03247 0.45 -0.2 3,382,739 + ECD_03247 0.50 -0.9 3,382,740 - ECD_03247 0.50 -1.0 3,382,741 + ECD_03247 0.50 -0.1 3,382,741 + ECD_03247 0.50 -0.2 3,382,742 - ECD_03247 0.50 +5.3 3,382,742 - ECD_03247 0.50 +0.4 3,382,769 - ECD_03247 0.54 +0.1 3,382,884 + ECD_03247 0.68 +0.6 3,382,913 + ECD_03247 0.72 +0.0 3,382,913 + ECD_03247 0.72 -1.4 3,382,913 + ECD_03247 0.72 -1.2 3,382,913 + ECD_03247 0.72 +1.4 3,382,914 - ECD_03247 0.72 +0.3 3,382,914 - ECD_03247 0.72 -0.1 3,382,914 - ECD_03247 0.72 -1.6 3,382,950 + ECD_03247 0.77 +1.4 3,382,950 + ECD_03247 0.77 +2.2 3,382,951 - ECD_03247 0.77 +0.8 3,382,961 + ECD_03247 0.78 +2.1 3,383,001 - ECD_03247 0.83 -0.1 3,383,094 + -0.2 3,383,094 + +0.8 3,383,094 + -0.5 3,383,094 + +1.1 3,383,167 - -0.4 3,383,167 - +0.2 3,383,168 + +0.5 3,383,169 - -1.2 3,383,191 + -1.1 3,383,192 - +0.0 3,383,192 - -0.3 3,383,192 - +0.5 3,383,192 - -0.7 3,383,193 + +0.0 3,383,194 - -1.1 3,383,194 - -0.9 3,383,194 - -1.6 3,383,194 - +0.1 3,383,194 - -1.0 3,383,213 + +0.7 3,383,232 + +0.3 3,383,259 + -0.8 3,383,265 - -2.0 3,383,315 + -0.7 3,383,322 + -1.8 3,383,322 + -2.1 3,383,322 + -0.5 3,383,323 - -0.4 3,383,323 - -1.7 3,383,323 - -1.5 3,383,324 + -2.5 3,383,365 - +5.1 3,383,455 + +1.8 3,383,519 + ECD_03248 0.11 -2.1 3,383,519 + ECD_03248 0.11 -1.3 3,383,519 + ECD_03248 0.11 -1.1 3,383,605 + ECD_03248 0.14 -0.8 3,383,605 + ECD_03248 0.14 -0.9 3,383,605 + ECD_03248 0.14 -2.4 3,383,606 - ECD_03248 0.14 -1.0 3,383,606 - ECD_03248 0.14 -2.1 3,383,665 + ECD_03248 0.16 -2.0 3,383,672 - ECD_03248 0.17 -1.9 3,383,735 + ECD_03248 0.19 +0.2 3,383,736 - ECD_03248 0.19 -2.4 3,383,750 + ECD_03248 0.20 -0.1 3,383,768 + ECD_03248 0.20 -0.9 3,383,768 + ECD_03248 0.20 -2.4 3,383,769 - ECD_03248 0.20 -2.4 3,383,796 - ECD_03248 0.21 -0.2 3,383,796 - ECD_03248 0.21 -1.7 3,383,796 - ECD_03248 0.21 -0.7 3,383,886 - ECD_03248 0.25 -1.6 3,383,948 + ECD_03248 0.27 +0.7 3,383,948 + ECD_03248 0.27 -1.3 3,383,948 + ECD_03248 0.27 -1.7 3,383,948 + ECD_03248 0.27 -0.9 3,383,948 + ECD_03248 0.27 +0.5 3,383,949 - ECD_03248 0.27 -1.9 3,383,949 - ECD_03248 0.27 +1.0 3,383,950 + ECD_03248 0.27 -0.3 3,383,951 - ECD_03248 0.27 -2.1 3,383,951 - ECD_03248 0.27 +0.0 3,383,993 - ECD_03248 0.29 -2.1 3,384,002 + ECD_03248 0.29 -1.7 3,384,003 - ECD_03248 0.30 +0.0 3,384,065 + ECD_03248 0.32 -0.7 3,384,065 + ECD_03248 0.32 -1.9 3,384,065 + ECD_03248 0.32 -1.6 3,384,065 + ECD_03248 0.32 -1.0 3,384,066 - ECD_03248 0.32 +0.2 3,384,066 - ECD_03248 0.32 -1.4 3,384,066 - ECD_03248 0.32 -1.9 3,384,066 - ECD_03248 0.32 -0.5 3,384,066 - ECD_03248 0.32 -0.7 3,384,066 - ECD_03248 0.32 -0.7 3,384,089 + ECD_03248 0.33 +0.3 3,384,110 + ECD_03248 0.34 -0.2 3,384,110 + ECD_03248 0.34 +1.3 3,384,110 + ECD_03248 0.34 -0.9 3,384,111 - ECD_03248 0.34 -0.4 3,384,156 + ECD_03248 0.36 -1.6 3,384,157 - ECD_03248 0.36 -2.0 3,384,160 + ECD_03248 0.36 -2.8 3,384,160 + ECD_03248 0.36 -0.9 3,384,161 - ECD_03248 0.36 -0.8 3,384,161 - ECD_03248 0.36 -1.0 3,384,161 - ECD_03248 0.36 -0.8 3,384,163 + ECD_03248 0.36 +0.1 3,384,164 - ECD_03248 0.36 -1.0 3,384,164 - ECD_03248 0.36 -1.0 3,384,176 + ECD_03248 0.36 -1.8 3,384,176 + ECD_03248 0.36 +0.6 3,384,176 + ECD_03248 0.36 -1.2 3,384,176 + ECD_03248 0.36 -2.7 3,384,284 + ECD_03248 0.41 -0.5 3,384,284 + ECD_03248 0.41 -1.5 3,384,284 + ECD_03248 0.41 -2.6 3,384,284 + ECD_03248 0.41 -2.5 3,384,284 + ECD_03248 0.41 +0.2 3,384,284 + ECD_03248 0.41 -1.0 3,384,284 + ECD_03248 0.41 -0.5 3,384,436 + ECD_03248 0.46 -1.4 3,384,437 - ECD_03248 0.47 +0.5 3,384,662 + ECD_03248 0.55 -2.6 3,384,663 - ECD_03248 0.55 -1.2 3,384,700 + ECD_03248 0.57 +1.0 3,384,700 + ECD_03248 0.57 -0.9 3,384,700 + ECD_03248 0.57 +1.1 3,384,700 + ECD_03248 0.57 -2.2 3,384,700 + ECD_03248 0.57 -2.4 3,384,700 + ECD_03248 0.57 -0.1 3,384,700 + ECD_03248 0.57 -0.7 3,384,701 - ECD_03248 0.57 +1.7 3,384,701 - ECD_03248 0.57 -1.6 3,384,701 - ECD_03248 0.57 -0.6 3,384,701 - ECD_03248 0.57 -0.7 3,384,701 - ECD_03248 0.57 -0.8 3,384,779 + ECD_03248 0.60 -1.3 3,384,780 - ECD_03248 0.60 -2.1 3,385,021 + ECD_03248 0.69 -1.4 3,385,021 + ECD_03248 0.69 -3.5 3,385,021 + ECD_03248 0.69 -0.7 3,385,096 + ECD_03248 0.72 -1.9 3,385,109 + ECD_03248 0.73 -3.8 3,385,109 + ECD_03248 0.73 -2.7 3,385,110 - ECD_03248 0.73 -0.9 3,385,117 + ECD_03248 0.73 -2.5 3,385,118 - ECD_03248 0.73 -1.3 3,385,118 - ECD_03248 0.73 -1.1 3,385,166 - ECD_03248 0.75 +0.7 3,385,257 - ECD_03248 0.79 -1.4 3,385,298 - ECD_03248 0.80 -0.5 3,385,318 + ECD_03248 0.81 -1.1 3,385,319 - ECD_03248 0.81 -2.2 3,385,319 - ECD_03248 0.81 +0.2 3,385,319 - ECD_03248 0.81 +0.3 3,385,439 + ECD_03248 0.86 -0.8 3,385,493 - ECD_03248 0.88 -1.0 3,385,504 + ECD_03248 0.88 +0.5 3,385,526 - ECD_03248 0.89 -2.1 3,385,586 + -0.8 3,385,586 + -0.4 3,385,586 + +0.2 3,385,587 - -1.2 3,385,587 - -1.2 3,385,587 - -1.6 3,385,588 + -0.2 3,385,589 - -2.1 3,385,589 - -1.7 3,385,680 + -1.8 3,385,680 + -0.3 3,385,680 + +0.0 3,385,681 - -1.3 3,385,684 + -1.3 3,385,685 - -2.9 3,385,911 - -1.0 3,385,913 - -1.3 3,385,963 - +0.0 3,385,971 - -1.6 3,385,971 - -0.4 3,386,025 + ECD_03249 0.10 +1.2 3,386,026 - ECD_03249 0.10 -1.2 3,386,026 - ECD_03249 0.10 -0.7 3,386,026 - ECD_03249 0.10 -1.7 3,386,415 - ECD_03249 0.80 -0.7 3,386,539 + -1.2 3,386,539 + -0.7 3,386,539 + +2.0 3,386,539 + +0.9 3,386,539 + +0.5 3,386,539 + -1.5 3,386,540 - -0.2 3,386,540 - +0.5 3,386,540 - -0.7 3,386,540 - -1.1 3,386,540 - +1.9 3,386,624 - +1.0 3,386,690 + -0.6 3,386,713 + -1.0 3,386,714 - +0.2 3,386,740 + +1.1 3,386,794 + -0.7 3,386,794 + -0.7 3,386,795 - -1.8 3,386,795 - -0.6 3,386,795 - -0.1 3,386,795 - +1.4
Or see this region's nucleotide sequence