Experiment: Tailocin 256
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03076 and ECD_03077 are separated by 581 nucleotides ECD_03077 and ECD_03078 are separated by 12 nucleotides
ECD_03076: ECD_03076 - putative Fe-S oxidoreductase, Radical SAM superfamily protein, at 3,221,621 to 3,222,550
_03076
ECD_03077: ECD_03077 - glutamate synthase, large subunit, at 3,223,132 to 3,227,685
_03077
ECD_03078: ECD_03078 - glutamate synthase, 4Fe-4S protein, small subunit, at 3,227,698 to 3,229,116
_03078
Position (kb)
3223
3224
3225
3226
3227
3228 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3222.151 kb on + strand, within ECD_03076 at 3222.151 kb on + strand, within ECD_03076 at 3222.151 kb on + strand, within ECD_03076 at 3222.151 kb on + strand, within ECD_03076 at 3222.152 kb on - strand, within ECD_03076 at 3222.224 kb on - strand, within ECD_03076 at 3222.250 kb on - strand, within ECD_03076 at 3222.250 kb on - strand, within ECD_03076 at 3222.250 kb on - strand, within ECD_03076 at 3222.253 kb on + strand, within ECD_03076 at 3222.253 kb on + strand, within ECD_03076 at 3222.253 kb on + strand, within ECD_03076 at 3222.253 kb on + strand, within ECD_03076 at 3222.253 kb on + strand, within ECD_03076 at 3222.254 kb on - strand, within ECD_03076 at 3222.254 kb on - strand, within ECD_03076 at 3222.254 kb on - strand, within ECD_03076 at 3222.254 kb on - strand, within ECD_03076 at 3222.254 kb on - strand, within ECD_03076 at 3222.254 kb on - strand, within ECD_03076 at 3222.290 kb on - strand, within ECD_03076 at 3222.291 kb on + strand, within ECD_03076 at 3222.291 kb on + strand, within ECD_03076 at 3222.312 kb on + strand, within ECD_03076 at 3222.313 kb on - strand, within ECD_03076 at 3222.313 kb on - strand, within ECD_03076 at 3222.332 kb on + strand, within ECD_03076 at 3222.407 kb on - strand, within ECD_03076 at 3222.482 kb on - strand at 3222.482 kb on - strand at 3222.482 kb on - strand at 3222.482 kb on - strand at 3222.482 kb on - strand at 3222.526 kb on + strand at 3222.526 kb on + strand at 3222.527 kb on - strand at 3222.533 kb on + strand at 3222.845 kb on - strand at 3222.973 kb on + strand at 3222.974 kb on - strand at 3222.974 kb on - strand at 3222.985 kb on - strand at 3223.048 kb on + strand at 3223.052 kb on + strand at 3223.082 kb on + strand at 3223.224 kb on + strand at 3223.224 kb on + strand at 3223.224 kb on + strand at 3223.224 kb on + strand at 3223.231 kb on + strand at 3223.236 kb on + strand at 3223.254 kb on + strand at 3223.283 kb on + strand at 3223.283 kb on + strand at 3223.283 kb on + strand at 3223.283 kb on + strand at 3223.283 kb on + strand at 3223.284 kb on - strand at 3223.284 kb on - strand at 3223.307 kb on + strand at 3223.307 kb on + strand at 3223.314 kb on + strand at 3223.323 kb on - strand at 3223.465 kb on + strand at 3223.481 kb on + strand at 3223.481 kb on + strand at 3223.482 kb on - strand at 3223.492 kb on - strand at 3223.747 kb on + strand, within ECD_03077 at 3223.747 kb on + strand, within ECD_03077 at 3223.748 kb on - strand, within ECD_03077 at 3223.748 kb on - strand, within ECD_03077 at 3223.748 kb on - strand, within ECD_03077 at 3223.756 kb on - strand, within ECD_03077 at 3223.781 kb on - strand, within ECD_03077 at 3223.781 kb on - strand, within ECD_03077 at 3223.781 kb on - strand, within ECD_03077 at 3223.794 kb on + strand, within ECD_03077 at 3223.935 kb on + strand, within ECD_03077 at 3223.991 kb on - strand, within ECD_03077 at 3223.991 kb on - strand, within ECD_03077 at 3223.992 kb on + strand, within ECD_03077 at 3224.112 kb on + strand, within ECD_03077 at 3224.133 kb on - strand, within ECD_03077 at 3224.133 kb on - strand, within ECD_03077 at 3224.135 kb on + strand, within ECD_03077 at 3224.135 kb on + strand, within ECD_03077 at 3224.135 kb on + strand, within ECD_03077 at 3224.135 kb on + strand, within ECD_03077 at 3224.135 kb on + strand, within ECD_03077 at 3224.136 kb on - strand, within ECD_03077 at 3224.136 kb on - strand, within ECD_03077 at 3224.136 kb on - strand, within ECD_03077 at 3224.136 kb on - strand, within ECD_03077 at 3224.138 kb on + strand, within ECD_03077 at 3224.138 kb on + strand, within ECD_03077 at 3224.199 kb on + strand, within ECD_03077 at 3224.199 kb on + strand, within ECD_03077 at 3224.211 kb on + strand, within ECD_03077 at 3224.212 kb on - strand, within ECD_03077 at 3224.488 kb on + strand, within ECD_03077 at 3224.488 kb on + strand, within ECD_03077 at 3224.489 kb on - strand, within ECD_03077 at 3224.490 kb on + strand, within ECD_03077 at 3224.490 kb on + strand, within ECD_03077 at 3224.491 kb on - strand, within ECD_03077 at 3224.491 kb on - strand, within ECD_03077 at 3224.607 kb on + strand, within ECD_03077 at 3224.637 kb on - strand, within ECD_03077 at 3224.637 kb on - strand, within ECD_03077 at 3224.728 kb on - strand, within ECD_03077 at 3224.731 kb on + strand, within ECD_03077 at 3224.737 kb on + strand, within ECD_03077 at 3224.737 kb on + strand, within ECD_03077 at 3224.802 kb on + strand, within ECD_03077 at 3224.802 kb on + strand, within ECD_03077 at 3224.802 kb on + strand, within ECD_03077 at 3224.803 kb on - strand, within ECD_03077 at 3224.803 kb on - strand, within ECD_03077 at 3224.803 kb on - strand, within ECD_03077 at 3224.803 kb on - strand, within ECD_03077 at 3224.803 kb on - strand, within ECD_03077 at 3224.803 kb on - strand, within ECD_03077 at 3224.880 kb on + strand, within ECD_03077 at 3224.881 kb on - strand, within ECD_03077 at 3224.952 kb on + strand, within ECD_03077 at 3224.961 kb on + strand, within ECD_03077 at 3225.240 kb on + strand, within ECD_03077 at 3225.241 kb on - strand, within ECD_03077 at 3225.245 kb on - strand, within ECD_03077 at 3225.250 kb on + strand, within ECD_03077 at 3225.307 kb on + strand, within ECD_03077 at 3225.328 kb on + strand, within ECD_03077 at 3225.328 kb on + strand, within ECD_03077 at 3225.329 kb on - strand, within ECD_03077 at 3225.329 kb on - strand, within ECD_03077 at 3225.356 kb on - strand, within ECD_03077 at 3225.443 kb on + strand, within ECD_03077 at 3225.443 kb on + strand, within ECD_03077 at 3225.444 kb on - strand, within ECD_03077 at 3225.444 kb on - strand, within ECD_03077 at 3225.580 kb on + strand, within ECD_03077 at 3225.581 kb on - strand, within ECD_03077 at 3225.607 kb on + strand, within ECD_03077 at 3225.607 kb on + strand, within ECD_03077 at 3225.608 kb on - strand, within ECD_03077 at 3225.676 kb on + strand, within ECD_03077 at 3225.732 kb on + strand, within ECD_03077 at 3225.985 kb on + strand, within ECD_03077 at 3226.078 kb on + strand, within ECD_03077 at 3226.078 kb on + strand, within ECD_03077 at 3226.078 kb on + strand, within ECD_03077 at 3226.079 kb on - strand, within ECD_03077 at 3226.143 kb on + strand, within ECD_03077 at 3226.144 kb on - strand, within ECD_03077 at 3226.147 kb on + strand, within ECD_03077 at 3226.147 kb on + strand, within ECD_03077 at 3226.147 kb on + strand, within ECD_03077 at 3226.148 kb on - strand, within ECD_03077 at 3226.163 kb on + strand, within ECD_03077 at 3226.241 kb on + strand, within ECD_03077 at 3226.242 kb on - strand, within ECD_03077 at 3226.273 kb on + strand, within ECD_03077 at 3226.273 kb on + strand, within ECD_03077 at 3226.342 kb on + strand, within ECD_03077 at 3226.343 kb on - strand, within ECD_03077 at 3226.530 kb on + strand, within ECD_03077 at 3226.534 kb on + strand, within ECD_03077 at 3226.534 kb on + strand, within ECD_03077 at 3226.534 kb on + strand, within ECD_03077 at 3226.534 kb on + strand, within ECD_03077 at 3226.535 kb on - strand, within ECD_03077 at 3226.542 kb on + strand, within ECD_03077 at 3226.542 kb on + strand, within ECD_03077 at 3226.542 kb on + strand, within ECD_03077 at 3226.574 kb on + strand, within ECD_03077 at 3226.574 kb on + strand, within ECD_03077 at 3226.639 kb on + strand, within ECD_03077 at 3226.812 kb on + strand, within ECD_03077 at 3226.822 kb on + strand, within ECD_03077 at 3226.822 kb on + strand, within ECD_03077 at 3226.822 kb on + strand, within ECD_03077 at 3226.977 kb on + strand, within ECD_03077 at 3227.019 kb on + strand, within ECD_03077 at 3227.029 kb on + strand, within ECD_03077 at 3227.089 kb on + strand, within ECD_03077 at 3227.090 kb on - strand, within ECD_03077 at 3227.113 kb on + strand, within ECD_03077 at 3227.142 kb on - strand, within ECD_03077 at 3227.215 kb on + strand, within ECD_03077 at 3227.278 kb on - strand at 3227.289 kb on + strand at 3227.290 kb on - strand at 3227.300 kb on + strand at 3227.300 kb on + strand at 3227.300 kb on + strand at 3227.301 kb on - strand at 3227.301 kb on - strand at 3227.330 kb on - strand at 3227.331 kb on + strand at 3227.331 kb on + strand at 3227.331 kb on + strand at 3227.331 kb on + strand at 3227.331 kb on + strand at 3227.332 kb on - strand at 3227.332 kb on - strand at 3227.332 kb on - strand at 3227.332 kb on - strand at 3227.332 kb on - strand at 3227.407 kb on + strand at 3227.407 kb on + strand at 3227.468 kb on + strand at 3227.468 kb on + strand at 3227.468 kb on + strand at 3227.514 kb on + strand at 3227.515 kb on - strand at 3227.535 kb on + strand at 3227.536 kb on - strand at 3227.589 kb on + strand at 3227.624 kb on + strand at 3227.624 kb on + strand at 3227.887 kb on + strand, within ECD_03078 at 3227.887 kb on + strand, within ECD_03078 at 3227.887 kb on + strand, within ECD_03078 at 3227.887 kb on + strand, within ECD_03078 at 3227.888 kb on - strand, within ECD_03078 at 3227.888 kb on - strand, within ECD_03078 at 3227.888 kb on - strand, within ECD_03078 at 3228.070 kb on + strand, within ECD_03078 at 3228.071 kb on - strand, within ECD_03078 at 3228.071 kb on - strand, within ECD_03078 at 3228.071 kb on - strand, within ECD_03078 at 3228.072 kb on + strand, within ECD_03078 at 3228.072 kb on + strand, within ECD_03078 at 3228.073 kb on - strand, within ECD_03078 at 3228.073 kb on - strand, within ECD_03078 at 3228.422 kb on - strand, within ECD_03078 at 3228.422 kb on - strand, within ECD_03078 at 3228.422 kb on - strand, within ECD_03078 at 3228.470 kb on - strand, within ECD_03078 at 3228.509 kb on + strand, within ECD_03078 at 3228.509 kb on + strand, within ECD_03078 at 3228.640 kb on - strand, within ECD_03078
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 256 remove 3,222,151 + ECD_03076 0.57 +0.1 3,222,151 + ECD_03076 0.57 -1.4 3,222,151 + ECD_03076 0.57 -0.2 3,222,151 + ECD_03076 0.57 -0.3 3,222,152 - ECD_03076 0.57 +0.4 3,222,224 - ECD_03076 0.65 -1.2 3,222,250 - ECD_03076 0.68 +0.4 3,222,250 - ECD_03076 0.68 -0.4 3,222,250 - ECD_03076 0.68 +0.4 3,222,253 + ECD_03076 0.68 +1.1 3,222,253 + ECD_03076 0.68 -0.8 3,222,253 + ECD_03076 0.68 -1.3 3,222,253 + ECD_03076 0.68 -0.0 3,222,253 + ECD_03076 0.68 +0.0 3,222,254 - ECD_03076 0.68 -1.6 3,222,254 - ECD_03076 0.68 -0.2 3,222,254 - ECD_03076 0.68 +0.1 3,222,254 - ECD_03076 0.68 -0.3 3,222,254 - ECD_03076 0.68 -0.2 3,222,254 - ECD_03076 0.68 +1.6 3,222,290 - ECD_03076 0.72 -0.9 3,222,291 + ECD_03076 0.72 -0.0 3,222,291 + ECD_03076 0.72 -0.2 3,222,312 + ECD_03076 0.74 -1.0 3,222,313 - ECD_03076 0.74 -0.6 3,222,313 - ECD_03076 0.74 +0.3 3,222,332 + ECD_03076 0.76 +1.1 3,222,407 - ECD_03076 0.85 -0.9 3,222,482 - +0.3 3,222,482 - -0.1 3,222,482 - -1.3 3,222,482 - +1.6 3,222,482 - -0.5 3,222,526 + -1.1 3,222,526 + +3.8 3,222,527 - +1.5 3,222,533 + +0.0 3,222,845 - -1.7 3,222,973 + -0.6 3,222,974 - -0.6 3,222,974 - -0.1 3,222,985 - -0.3 3,223,048 + -1.8 3,223,052 + -1.3 3,223,082 + -1.9 3,223,224 + -1.5 3,223,224 + -1.2 3,223,224 + +0.4 3,223,224 + +0.5 3,223,231 + -0.1 3,223,236 + -0.0 3,223,254 + +0.6 3,223,283 + -0.1 3,223,283 + -0.4 3,223,283 + +0.0 3,223,283 + -0.1 3,223,283 + +0.5 3,223,284 - +0.8 3,223,284 - -0.5 3,223,307 + +0.0 3,223,307 + +1.3 3,223,314 + -0.1 3,223,323 - +0.4 3,223,465 + -0.3 3,223,481 + +3.8 3,223,481 + -2.2 3,223,482 - -0.0 3,223,492 - -1.6 3,223,747 + ECD_03077 0.14 -0.6 3,223,747 + ECD_03077 0.14 -2.2 3,223,748 - ECD_03077 0.14 -0.8 3,223,748 - ECD_03077 0.14 +1.2 3,223,748 - ECD_03077 0.14 +2.2 3,223,756 - ECD_03077 0.14 +0.7 3,223,781 - ECD_03077 0.14 +0.4 3,223,781 - ECD_03077 0.14 -2.4 3,223,781 - ECD_03077 0.14 +0.6 3,223,794 + ECD_03077 0.15 -0.1 3,223,935 + ECD_03077 0.18 +2.3 3,223,991 - ECD_03077 0.19 -1.6 3,223,991 - ECD_03077 0.19 +1.5 3,223,992 + ECD_03077 0.19 -2.5 3,224,112 + ECD_03077 0.22 +1.5 3,224,133 - ECD_03077 0.22 -0.7 3,224,133 - ECD_03077 0.22 -2.0 3,224,135 + ECD_03077 0.22 -1.2 3,224,135 + ECD_03077 0.22 -0.3 3,224,135 + ECD_03077 0.22 -2.7 3,224,135 + ECD_03077 0.22 +0.2 3,224,135 + ECD_03077 0.22 -0.4 3,224,136 - ECD_03077 0.22 -1.2 3,224,136 - ECD_03077 0.22 -1.4 3,224,136 - ECD_03077 0.22 +0.1 3,224,136 - ECD_03077 0.22 -2.3 3,224,138 + ECD_03077 0.22 -1.4 3,224,138 + ECD_03077 0.22 -0.1 3,224,199 + ECD_03077 0.23 -0.8 3,224,199 + ECD_03077 0.23 +0.3 3,224,211 + ECD_03077 0.24 +1.1 3,224,212 - ECD_03077 0.24 +0.1 3,224,488 + ECD_03077 0.30 +0.3 3,224,488 + ECD_03077 0.30 -0.2 3,224,489 - ECD_03077 0.30 -0.5 3,224,490 + ECD_03077 0.30 -0.4 3,224,490 + ECD_03077 0.30 +0.0 3,224,491 - ECD_03077 0.30 -0.0 3,224,491 - ECD_03077 0.30 -0.5 3,224,607 + ECD_03077 0.32 -0.1 3,224,637 - ECD_03077 0.33 +1.1 3,224,637 - ECD_03077 0.33 -1.4 3,224,728 - ECD_03077 0.35 +0.8 3,224,731 + ECD_03077 0.35 +0.3 3,224,737 + ECD_03077 0.35 -0.4 3,224,737 + ECD_03077 0.35 -0.5 3,224,802 + ECD_03077 0.37 +0.2 3,224,802 + ECD_03077 0.37 -2.4 3,224,802 + ECD_03077 0.37 -1.6 3,224,803 - ECD_03077 0.37 -0.6 3,224,803 - ECD_03077 0.37 -1.8 3,224,803 - ECD_03077 0.37 +1.2 3,224,803 - ECD_03077 0.37 -0.3 3,224,803 - ECD_03077 0.37 +0.1 3,224,803 - ECD_03077 0.37 +0.3 3,224,880 + ECD_03077 0.38 +0.1 3,224,881 - ECD_03077 0.38 +0.7 3,224,952 + ECD_03077 0.40 -0.9 3,224,961 + ECD_03077 0.40 -0.7 3,225,240 + ECD_03077 0.46 -0.7 3,225,241 - ECD_03077 0.46 +1.1 3,225,245 - ECD_03077 0.46 +0.5 3,225,250 + ECD_03077 0.47 -0.4 3,225,307 + ECD_03077 0.48 -1.4 3,225,328 + ECD_03077 0.48 -1.1 3,225,328 + ECD_03077 0.48 -1.2 3,225,329 - ECD_03077 0.48 -0.1 3,225,329 - ECD_03077 0.48 +1.1 3,225,356 - ECD_03077 0.49 +0.1 3,225,443 + ECD_03077 0.51 +0.4 3,225,443 + ECD_03077 0.51 -1.1 3,225,444 - ECD_03077 0.51 -0.6 3,225,444 - ECD_03077 0.51 -0.7 3,225,580 + ECD_03077 0.54 -0.3 3,225,581 - ECD_03077 0.54 +0.3 3,225,607 + ECD_03077 0.54 -0.9 3,225,607 + ECD_03077 0.54 -2.2 3,225,608 - ECD_03077 0.54 +1.0 3,225,676 + ECD_03077 0.56 -0.1 3,225,732 + ECD_03077 0.57 -0.1 3,225,985 + ECD_03077 0.63 +1.0 3,226,078 + ECD_03077 0.65 +0.0 3,226,078 + ECD_03077 0.65 -1.1 3,226,078 + ECD_03077 0.65 -1.6 3,226,079 - ECD_03077 0.65 -0.9 3,226,143 + ECD_03077 0.66 -0.6 3,226,144 - ECD_03077 0.66 -0.2 3,226,147 + ECD_03077 0.66 +0.1 3,226,147 + ECD_03077 0.66 -0.1 3,226,147 + ECD_03077 0.66 -0.3 3,226,148 - ECD_03077 0.66 -0.5 3,226,163 + ECD_03077 0.67 -0.3 3,226,241 + ECD_03077 0.68 -1.2 3,226,242 - ECD_03077 0.68 +1.4 3,226,273 + ECD_03077 0.69 +0.4 3,226,273 + ECD_03077 0.69 +3.9 3,226,342 + ECD_03077 0.70 -3.7 3,226,343 - ECD_03077 0.71 -0.7 3,226,530 + ECD_03077 0.75 -0.3 3,226,534 + ECD_03077 0.75 -0.2 3,226,534 + ECD_03077 0.75 -0.8 3,226,534 + ECD_03077 0.75 -0.2 3,226,534 + ECD_03077 0.75 -0.9 3,226,535 - ECD_03077 0.75 -1.1 3,226,542 + ECD_03077 0.75 -0.8 3,226,542 + ECD_03077 0.75 +0.7 3,226,542 + ECD_03077 0.75 -0.8 3,226,574 + ECD_03077 0.76 +0.0 3,226,574 + ECD_03077 0.76 -1.0 3,226,639 + ECD_03077 0.77 -0.9 3,226,812 + ECD_03077 0.81 -1.0 3,226,822 + ECD_03077 0.81 -1.7 3,226,822 + ECD_03077 0.81 -0.9 3,226,822 + ECD_03077 0.81 +0.3 3,226,977 + ECD_03077 0.84 +1.8 3,227,019 + ECD_03077 0.85 -1.0 3,227,029 + ECD_03077 0.86 +0.3 3,227,089 + ECD_03077 0.87 -0.6 3,227,090 - ECD_03077 0.87 +0.0 3,227,113 + ECD_03077 0.87 -0.7 3,227,142 - ECD_03077 0.88 -1.6 3,227,215 + ECD_03077 0.90 -0.6 3,227,278 - -0.0 3,227,289 + +0.3 3,227,290 - -1.1 3,227,300 + -0.9 3,227,300 + -1.1 3,227,300 + -0.5 3,227,301 - +0.7 3,227,301 - -0.1 3,227,330 - -2.2 3,227,331 + -0.4 3,227,331 + -1.8 3,227,331 + +3.5 3,227,331 + +1.3 3,227,331 + -0.5 3,227,332 - -1.6 3,227,332 - -0.3 3,227,332 - -0.0 3,227,332 - -0.0 3,227,332 - -0.8 3,227,407 + -0.1 3,227,407 + -0.2 3,227,468 + +0.1 3,227,468 + -0.3 3,227,468 + +0.0 3,227,514 + -1.4 3,227,515 - +0.3 3,227,535 + -3.0 3,227,536 - +0.5 3,227,589 + -1.3 3,227,624 + -0.0 3,227,624 + +2.2 3,227,887 + ECD_03078 0.13 -0.4 3,227,887 + ECD_03078 0.13 -0.1 3,227,887 + ECD_03078 0.13 -1.0 3,227,887 + ECD_03078 0.13 -0.4 3,227,888 - ECD_03078 0.13 -1.0 3,227,888 - ECD_03078 0.13 +0.2 3,227,888 - ECD_03078 0.13 -1.4 3,228,070 + ECD_03078 0.26 -0.9 3,228,071 - ECD_03078 0.26 -0.3 3,228,071 - ECD_03078 0.26 -0.9 3,228,071 - ECD_03078 0.26 +1.2 3,228,072 + ECD_03078 0.26 -0.1 3,228,072 + ECD_03078 0.26 +1.1 3,228,073 - ECD_03078 0.26 -0.5 3,228,073 - ECD_03078 0.26 -0.1 3,228,422 - ECD_03078 0.51 +0.4 3,228,422 - ECD_03078 0.51 -0.4 3,228,422 - ECD_03078 0.51 +0.6 3,228,470 - ECD_03078 0.54 -0.9 3,228,509 + ECD_03078 0.57 -0.2 3,228,509 + ECD_03078 0.57 -0.8 3,228,640 - ECD_03078 0.66 -0.4
Or see this region's nucleotide sequence