Experiment: Tailocin 256
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02837 and ECD_02838 overlap by 1 nucleotides ECD_02838 and ECD_02839 are separated by 29 nucleotides
ECD_02837: ECD_02837 - putative type II secretion protein GspE, at 2,968,788 to 2,970,281
_02837
ECD_02838: ECD_02838 - putative type II secretion protein GspD, at 2,970,281 to 2,972,341
_02838
ECD_02839: ECD_02839 - putative secretion pathway protein, C-type protein, at 2,972,371 to 2,973,201
_02839
Position (kb)
2970
2971
2972
2973 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2969.313 kb on + strand, within ECD_02837 at 2969.313 kb on + strand, within ECD_02837 at 2969.313 kb on + strand, within ECD_02837 at 2969.313 kb on + strand, within ECD_02837 at 2969.314 kb on - strand, within ECD_02837 at 2969.314 kb on - strand, within ECD_02837 at 2969.411 kb on - strand, within ECD_02837 at 2969.817 kb on + strand, within ECD_02837 at 2969.817 kb on + strand, within ECD_02837 at 2969.817 kb on + strand, within ECD_02837 at 2969.817 kb on + strand, within ECD_02837 at 2969.818 kb on - strand, within ECD_02837 at 2969.818 kb on - strand, within ECD_02837 at 2969.818 kb on - strand, within ECD_02837 at 2969.818 kb on - strand, within ECD_02837 at 2969.818 kb on - strand, within ECD_02837 at 2970.251 kb on + strand at 2970.270 kb on + strand at 2970.271 kb on - strand at 2970.381 kb on - strand at 2970.420 kb on + strand at 2970.420 kb on + strand at 2970.421 kb on - strand at 2970.421 kb on - strand at 2970.421 kb on - strand at 2970.421 kb on - strand at 2970.421 kb on - strand at 2970.424 kb on + strand at 2970.427 kb on - strand at 2970.734 kb on + strand, within ECD_02838 at 2970.835 kb on + strand, within ECD_02838 at 2970.926 kb on - strand, within ECD_02838 at 2971.055 kb on + strand, within ECD_02838 at 2971.055 kb on + strand, within ECD_02838 at 2971.063 kb on + strand, within ECD_02838 at 2971.211 kb on - strand, within ECD_02838 at 2971.339 kb on + strand, within ECD_02838 at 2971.340 kb on - strand, within ECD_02838 at 2971.340 kb on - strand, within ECD_02838 at 2971.340 kb on - strand, within ECD_02838 at 2971.443 kb on - strand, within ECD_02838 at 2971.792 kb on + strand, within ECD_02838 at 2971.792 kb on + strand, within ECD_02838 at 2971.793 kb on - strand, within ECD_02838 at 2971.793 kb on - strand, within ECD_02838 at 2971.793 kb on - strand, within ECD_02838 at 2971.816 kb on + strand, within ECD_02838 at 2971.817 kb on - strand, within ECD_02838 at 2971.888 kb on + strand, within ECD_02838 at 2971.888 kb on + strand, within ECD_02838 at 2971.889 kb on - strand, within ECD_02838 at 2971.889 kb on - strand, within ECD_02838 at 2971.889 kb on - strand, within ECD_02838 at 2971.893 kb on - strand, within ECD_02838 at 2971.901 kb on + strand, within ECD_02838 at 2971.929 kb on + strand, within ECD_02838 at 2971.930 kb on - strand, within ECD_02838 at 2972.018 kb on + strand, within ECD_02838 at 2972.029 kb on - strand, within ECD_02838 at 2972.057 kb on + strand, within ECD_02838 at 2972.057 kb on + strand, within ECD_02838 at 2972.058 kb on - strand, within ECD_02838 at 2972.064 kb on + strand, within ECD_02838 at 2972.065 kb on - strand, within ECD_02838 at 2972.068 kb on - strand, within ECD_02838 at 2972.323 kb on + strand at 2972.324 kb on - strand at 2972.324 kb on - strand at 2972.324 kb on - strand at 2972.413 kb on + strand at 2972.414 kb on - strand at 2972.447 kb on - strand at 2972.447 kb on - strand at 2972.595 kb on + strand, within ECD_02839 at 2972.596 kb on - strand, within ECD_02839 at 2972.618 kb on + strand, within ECD_02839 at 2972.618 kb on + strand, within ECD_02839 at 2972.618 kb on + strand, within ECD_02839 at 2972.619 kb on - strand, within ECD_02839 at 2972.619 kb on - strand, within ECD_02839 at 2972.619 kb on - strand, within ECD_02839 at 2972.619 kb on - strand, within ECD_02839 at 2972.805 kb on - strand, within ECD_02839 at 2972.879 kb on + strand, within ECD_02839 at 2972.880 kb on - strand, within ECD_02839 at 2972.955 kb on + strand, within ECD_02839 at 2972.956 kb on - strand, within ECD_02839 at 2972.996 kb on - strand, within ECD_02839 at 2973.018 kb on - strand, within ECD_02839 at 2973.046 kb on + strand, within ECD_02839 at 2973.142 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 256 remove 2,969,313 + ECD_02837 0.35 -3.1 2,969,313 + ECD_02837 0.35 -1.3 2,969,313 + ECD_02837 0.35 -0.6 2,969,313 + ECD_02837 0.35 -2.6 2,969,314 - ECD_02837 0.35 -1.3 2,969,314 - ECD_02837 0.35 -0.7 2,969,411 - ECD_02837 0.42 -2.2 2,969,817 + ECD_02837 0.69 -1.2 2,969,817 + ECD_02837 0.69 +1.5 2,969,817 + ECD_02837 0.69 -1.1 2,969,817 + ECD_02837 0.69 +0.3 2,969,818 - ECD_02837 0.69 -3.0 2,969,818 - ECD_02837 0.69 -1.2 2,969,818 - ECD_02837 0.69 -1.7 2,969,818 - ECD_02837 0.69 -2.8 2,969,818 - ECD_02837 0.69 -1.3 2,970,251 + -1.4 2,970,270 + -3.2 2,970,271 - -2.7 2,970,381 - -0.8 2,970,420 + -1.4 2,970,420 + -1.2 2,970,421 - -2.5 2,970,421 - -2.4 2,970,421 - -2.1 2,970,421 - -0.3 2,970,421 - +0.2 2,970,424 + -2.9 2,970,427 - -2.1 2,970,734 + ECD_02838 0.22 -1.9 2,970,835 + ECD_02838 0.27 -3.3 2,970,926 - ECD_02838 0.31 -0.1 2,971,055 + ECD_02838 0.38 -3.2 2,971,055 + ECD_02838 0.38 -3.1 2,971,063 + ECD_02838 0.38 -1.8 2,971,211 - ECD_02838 0.45 -1.1 2,971,339 + ECD_02838 0.51 -3.8 2,971,340 - ECD_02838 0.51 -1.0 2,971,340 - ECD_02838 0.51 -2.7 2,971,340 - ECD_02838 0.51 -1.8 2,971,443 - ECD_02838 0.56 +0.5 2,971,792 + ECD_02838 0.73 -1.6 2,971,792 + ECD_02838 0.73 -1.7 2,971,793 - ECD_02838 0.73 -3.1 2,971,793 - ECD_02838 0.73 -2.2 2,971,793 - ECD_02838 0.73 -3.1 2,971,816 + ECD_02838 0.74 -1.5 2,971,817 - ECD_02838 0.75 -1.0 2,971,888 + ECD_02838 0.78 -0.7 2,971,888 + ECD_02838 0.78 -2.8 2,971,889 - ECD_02838 0.78 -1.1 2,971,889 - ECD_02838 0.78 -1.5 2,971,889 - ECD_02838 0.78 -1.5 2,971,893 - ECD_02838 0.78 +0.7 2,971,901 + ECD_02838 0.79 -1.2 2,971,929 + ECD_02838 0.80 -1.1 2,971,930 - ECD_02838 0.80 -2.0 2,972,018 + ECD_02838 0.84 -0.4 2,972,029 - ECD_02838 0.85 -3.4 2,972,057 + ECD_02838 0.86 +0.1 2,972,057 + ECD_02838 0.86 -0.7 2,972,058 - ECD_02838 0.86 -2.0 2,972,064 + ECD_02838 0.87 -2.1 2,972,065 - ECD_02838 0.87 -0.8 2,972,068 - ECD_02838 0.87 -1.1 2,972,323 + -1.4 2,972,324 - +0.1 2,972,324 - -1.3 2,972,324 - +0.6 2,972,413 + -1.0 2,972,414 - -2.6 2,972,447 - +0.2 2,972,447 - -1.7 2,972,595 + ECD_02839 0.27 -1.3 2,972,596 - ECD_02839 0.27 -1.2 2,972,618 + ECD_02839 0.30 -1.4 2,972,618 + ECD_02839 0.30 -3.0 2,972,618 + ECD_02839 0.30 -0.9 2,972,619 - ECD_02839 0.30 -2.3 2,972,619 - ECD_02839 0.30 +0.1 2,972,619 - ECD_02839 0.30 -2.7 2,972,619 - ECD_02839 0.30 +0.8 2,972,805 - ECD_02839 0.52 -0.1 2,972,879 + ECD_02839 0.61 -1.8 2,972,880 - ECD_02839 0.61 -1.3 2,972,955 + ECD_02839 0.70 -3.5 2,972,956 - ECD_02839 0.70 -1.0 2,972,996 - ECD_02839 0.75 +1.1 2,973,018 - ECD_02839 0.78 -0.6 2,973,046 + ECD_02839 0.81 -0.3 2,973,142 - +0.4
Or see this region's nucleotide sequence