Experiment: Tailocin 256
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02816 and ECD_02817 are separated by 9 nucleotides ECD_02817 and ECD_02818 overlap by 4 nucleotides ECD_02818 and ECD_02819 are separated by 34 nucleotides
ECD_02816: ECD_02816 - KpsD protein, at 2,947,927 to 2,949,603
_02816
ECD_02817: ECD_02817 - KpsU protein, at 2,949,613 to 2,950,353
_02817
ECD_02818: ECD_02818 - Capsule polysaccharide export protein KpsC, at 2,950,350 to 2,952,377
_02818
ECD_02819: ECD_02819 - KpsS protein, at 2,952,412 to 2,953,644
_02819
Position (kb)
2950
2951
2952
2953 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2949.377 kb on - strand, within ECD_02816 at 2949.427 kb on - strand, within ECD_02816 at 2949.537 kb on + strand at 2949.562 kb on + strand at 2949.601 kb on + strand at 2949.627 kb on + strand at 2949.669 kb on + strand at 2949.716 kb on - strand, within ECD_02817 at 2949.728 kb on + strand, within ECD_02817 at 2949.870 kb on + strand, within ECD_02817 at 2949.870 kb on + strand, within ECD_02817 at 2949.870 kb on + strand, within ECD_02817 at 2949.871 kb on - strand, within ECD_02817 at 2949.871 kb on - strand, within ECD_02817 at 2949.871 kb on - strand, within ECD_02817 at 2949.885 kb on + strand, within ECD_02817 at 2949.885 kb on + strand, within ECD_02817 at 2949.885 kb on + strand, within ECD_02817 at 2949.886 kb on - strand, within ECD_02817 at 2949.889 kb on + strand, within ECD_02817 at 2949.889 kb on + strand, within ECD_02817 at 2949.890 kb on - strand, within ECD_02817 at 2949.890 kb on - strand, within ECD_02817 at 2949.890 kb on - strand, within ECD_02817 at 2949.894 kb on + strand, within ECD_02817 at 2949.935 kb on + strand, within ECD_02817 at 2949.936 kb on - strand, within ECD_02817 at 2949.947 kb on + strand, within ECD_02817 at 2949.947 kb on + strand, within ECD_02817 at 2949.947 kb on + strand, within ECD_02817 at 2949.947 kb on + strand, within ECD_02817 at 2950.046 kb on + strand, within ECD_02817 at 2950.050 kb on + strand, within ECD_02817 at 2950.101 kb on + strand, within ECD_02817 at 2950.101 kb on + strand, within ECD_02817 at 2950.138 kb on - strand, within ECD_02817 at 2950.141 kb on + strand, within ECD_02817 at 2950.142 kb on - strand, within ECD_02817 at 2950.142 kb on - strand, within ECD_02817 at 2950.626 kb on + strand, within ECD_02818 at 2950.626 kb on + strand, within ECD_02818 at 2950.629 kb on + strand, within ECD_02818 at 2950.823 kb on + strand, within ECD_02818 at 2950.823 kb on + strand, within ECD_02818 at 2950.823 kb on + strand, within ECD_02818 at 2950.824 kb on - strand, within ECD_02818 at 2950.829 kb on + strand, within ECD_02818 at 2950.843 kb on - strand, within ECD_02818 at 2951.127 kb on + strand, within ECD_02818 at 2951.226 kb on + strand, within ECD_02818 at 2951.226 kb on + strand, within ECD_02818 at 2951.244 kb on + strand, within ECD_02818 at 2951.244 kb on + strand, within ECD_02818 at 2951.269 kb on + strand, within ECD_02818 at 2951.278 kb on + strand, within ECD_02818 at 2951.279 kb on - strand, within ECD_02818 at 2951.305 kb on + strand, within ECD_02818 at 2951.432 kb on + strand, within ECD_02818 at 2951.432 kb on + strand, within ECD_02818 at 2951.464 kb on + strand, within ECD_02818 at 2951.607 kb on + strand, within ECD_02818 at 2951.608 kb on - strand, within ECD_02818 at 2951.608 kb on - strand, within ECD_02818 at 2951.610 kb on + strand, within ECD_02818 at 2951.610 kb on + strand, within ECD_02818 at 2951.718 kb on - strand, within ECD_02818 at 2951.901 kb on - strand, within ECD_02818 at 2951.923 kb on + strand, within ECD_02818 at 2951.924 kb on - strand, within ECD_02818 at 2952.073 kb on + strand, within ECD_02818 at 2952.073 kb on + strand, within ECD_02818 at 2952.236 kb on - strand at 2952.246 kb on - strand at 2952.246 kb on - strand at 2952.583 kb on + strand, within ECD_02819 at 2952.849 kb on + strand, within ECD_02819 at 2952.850 kb on - strand, within ECD_02819 at 2952.899 kb on + strand, within ECD_02819 at 2952.899 kb on + strand, within ECD_02819 at 2952.899 kb on + strand, within ECD_02819 at 2952.917 kb on - strand, within ECD_02819 at 2952.919 kb on + strand, within ECD_02819 at 2953.093 kb on + strand, within ECD_02819 at 2953.094 kb on - strand, within ECD_02819 at 2953.094 kb on - strand, within ECD_02819 at 2953.149 kb on + strand, within ECD_02819 at 2953.167 kb on + strand, within ECD_02819 at 2953.167 kb on + strand, within ECD_02819
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 256 remove 2,949,377 - ECD_02816 0.86 -3.6 2,949,427 - ECD_02816 0.89 -0.9 2,949,537 + -2.6 2,949,562 + -2.3 2,949,601 + -2.6 2,949,627 + -2.5 2,949,669 + -1.6 2,949,716 - ECD_02817 0.14 -2.7 2,949,728 + ECD_02817 0.16 -0.9 2,949,870 + ECD_02817 0.35 -1.2 2,949,870 + ECD_02817 0.35 -2.8 2,949,870 + ECD_02817 0.35 -1.4 2,949,871 - ECD_02817 0.35 -1.5 2,949,871 - ECD_02817 0.35 -3.2 2,949,871 - ECD_02817 0.35 -0.2 2,949,885 + ECD_02817 0.37 -0.7 2,949,885 + ECD_02817 0.37 -1.3 2,949,885 + ECD_02817 0.37 -1.6 2,949,886 - ECD_02817 0.37 +0.9 2,949,889 + ECD_02817 0.37 -0.4 2,949,889 + ECD_02817 0.37 -2.6 2,949,890 - ECD_02817 0.37 -0.4 2,949,890 - ECD_02817 0.37 -1.4 2,949,890 - ECD_02817 0.37 -1.0 2,949,894 + ECD_02817 0.38 -2.2 2,949,935 + ECD_02817 0.43 -1.1 2,949,936 - ECD_02817 0.44 -1.3 2,949,947 + ECD_02817 0.45 -2.3 2,949,947 + ECD_02817 0.45 -2.8 2,949,947 + ECD_02817 0.45 -1.6 2,949,947 + ECD_02817 0.45 -2.2 2,950,046 + ECD_02817 0.58 -1.1 2,950,050 + ECD_02817 0.59 +0.1 2,950,101 + ECD_02817 0.66 -3.1 2,950,101 + ECD_02817 0.66 -1.5 2,950,138 - ECD_02817 0.71 -2.4 2,950,141 + ECD_02817 0.71 -1.3 2,950,142 - ECD_02817 0.71 -2.1 2,950,142 - ECD_02817 0.71 -1.4 2,950,626 + ECD_02818 0.14 -1.4 2,950,626 + ECD_02818 0.14 -2.6 2,950,629 + ECD_02818 0.14 -1.9 2,950,823 + ECD_02818 0.23 -1.7 2,950,823 + ECD_02818 0.23 -3.0 2,950,823 + ECD_02818 0.23 -1.6 2,950,824 - ECD_02818 0.23 -2.3 2,950,829 + ECD_02818 0.24 -2.7 2,950,843 - ECD_02818 0.24 -0.9 2,951,127 + ECD_02818 0.38 -0.5 2,951,226 + ECD_02818 0.43 -1.6 2,951,226 + ECD_02818 0.43 -1.4 2,951,244 + ECD_02818 0.44 -0.6 2,951,244 + ECD_02818 0.44 -2.1 2,951,269 + ECD_02818 0.45 +0.2 2,951,278 + ECD_02818 0.46 -3.0 2,951,279 - ECD_02818 0.46 -1.3 2,951,305 + ECD_02818 0.47 -2.6 2,951,432 + ECD_02818 0.53 -0.5 2,951,432 + ECD_02818 0.53 -2.3 2,951,464 + ECD_02818 0.55 -2.7 2,951,607 + ECD_02818 0.62 -2.3 2,951,608 - ECD_02818 0.62 -0.9 2,951,608 - ECD_02818 0.62 -1.4 2,951,610 + ECD_02818 0.62 +3.3 2,951,610 + ECD_02818 0.62 -1.3 2,951,718 - ECD_02818 0.67 -1.2 2,951,901 - ECD_02818 0.76 -2.4 2,951,923 + ECD_02818 0.78 -1.5 2,951,924 - ECD_02818 0.78 -3.1 2,952,073 + ECD_02818 0.85 -0.7 2,952,073 + ECD_02818 0.85 -1.9 2,952,236 - -1.9 2,952,246 - -0.7 2,952,246 - -2.6 2,952,583 + ECD_02819 0.14 -1.4 2,952,849 + ECD_02819 0.35 -1.8 2,952,850 - ECD_02819 0.36 -1.9 2,952,899 + ECD_02819 0.39 -1.9 2,952,899 + ECD_02819 0.39 -0.4 2,952,899 + ECD_02819 0.39 -2.3 2,952,917 - ECD_02819 0.41 +0.6 2,952,919 + ECD_02819 0.41 -3.0 2,953,093 + ECD_02819 0.55 -0.5 2,953,094 - ECD_02819 0.55 +0.8 2,953,094 - ECD_02819 0.55 -1.6 2,953,149 + ECD_02819 0.60 -3.0 2,953,167 + ECD_02819 0.61 -1.1 2,953,167 + ECD_02819 0.61 -1.1
Or see this region's nucleotide sequence