Experiment: Tailocin 256
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02814 and ECD_02815 are separated by 83 nucleotides ECD_02815 and ECD_02816 are separated by 23 nucleotides
ECD_02814: ECD_02814 - hypothetical protein, at 2,945,664 to 2,946,683
_02814
ECD_02815: ECD_02815 - Capsule polysaccharide export inner-membrane protein kpsE, at 2,946,767 to 2,947,903
_02815
ECD_02816: ECD_02816 - KpsD protein, at 2,947,927 to 2,949,603
_02816
Position (kb)
2946
2947
2948 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2945.876 kb on + strand, within ECD_02814 at 2946.314 kb on - strand, within ECD_02814 at 2946.407 kb on + strand, within ECD_02814 at 2946.408 kb on - strand, within ECD_02814 at 2946.439 kb on + strand, within ECD_02814 at 2946.439 kb on + strand, within ECD_02814 at 2946.440 kb on - strand, within ECD_02814 at 2946.470 kb on + strand, within ECD_02814 at 2946.650 kb on + strand at 2946.685 kb on + strand at 2946.686 kb on - strand at 2946.686 kb on - strand at 2946.707 kb on + strand at 2946.708 kb on - strand at 2946.882 kb on - strand, within ECD_02815 at 2946.889 kb on + strand, within ECD_02815 at 2946.908 kb on + strand, within ECD_02815 at 2946.909 kb on - strand, within ECD_02815 at 2946.909 kb on - strand, within ECD_02815 at 2946.909 kb on - strand, within ECD_02815 at 2946.911 kb on - strand, within ECD_02815 at 2947.034 kb on + strand, within ECD_02815 at 2947.121 kb on - strand, within ECD_02815 at 2947.166 kb on + strand, within ECD_02815 at 2947.178 kb on - strand, within ECD_02815 at 2947.199 kb on - strand, within ECD_02815 at 2947.258 kb on + strand, within ECD_02815 at 2947.466 kb on - strand, within ECD_02815 at 2947.520 kb on + strand, within ECD_02815 at 2947.521 kb on - strand, within ECD_02815 at 2947.521 kb on - strand, within ECD_02815 at 2947.521 kb on - strand, within ECD_02815 at 2947.559 kb on - strand, within ECD_02815 at 2947.633 kb on - strand, within ECD_02815 at 2947.639 kb on + strand, within ECD_02815 at 2947.674 kb on + strand, within ECD_02815 at 2947.731 kb on + strand, within ECD_02815 at 2948.092 kb on - strand at 2948.198 kb on - strand, within ECD_02816 at 2948.198 kb on - strand, within ECD_02816 at 2948.199 kb on + strand, within ECD_02816 at 2948.399 kb on - strand, within ECD_02816 at 2948.399 kb on - strand, within ECD_02816 at 2948.399 kb on - strand, within ECD_02816 at 2948.408 kb on + strand, within ECD_02816 at 2948.435 kb on - strand, within ECD_02816 at 2948.500 kb on + strand, within ECD_02816 at 2948.501 kb on - strand, within ECD_02816 at 2948.542 kb on + strand, within ECD_02816 at 2948.542 kb on + strand, within ECD_02816 at 2948.596 kb on + strand, within ECD_02816 at 2948.677 kb on - strand, within ECD_02816 at 2948.710 kb on + strand, within ECD_02816 at 2948.793 kb on + strand, within ECD_02816 at 2948.833 kb on + strand, within ECD_02816 at 2948.834 kb on - strand, within ECD_02816 at 2948.862 kb on + strand, within ECD_02816 at 2948.863 kb on - strand, within ECD_02816 at 2948.885 kb on + strand, within ECD_02816
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 256 remove 2,945,876 + ECD_02814 0.21 -3.4 2,946,314 - ECD_02814 0.64 -2.7 2,946,407 + ECD_02814 0.73 -2.2 2,946,408 - ECD_02814 0.73 -0.4 2,946,439 + ECD_02814 0.76 -2.0 2,946,439 + ECD_02814 0.76 -2.8 2,946,440 - ECD_02814 0.76 -1.0 2,946,470 + ECD_02814 0.79 +2.7 2,946,650 + -3.5 2,946,685 + -1.4 2,946,686 - -1.7 2,946,686 - -3.8 2,946,707 + -0.5 2,946,708 - -0.2 2,946,882 - ECD_02815 0.10 -1.1 2,946,889 + ECD_02815 0.11 -1.2 2,946,908 + ECD_02815 0.12 -1.6 2,946,909 - ECD_02815 0.12 -3.3 2,946,909 - ECD_02815 0.12 -2.2 2,946,909 - ECD_02815 0.12 -1.4 2,946,911 - ECD_02815 0.13 -2.8 2,947,034 + ECD_02815 0.23 -1.6 2,947,121 - ECD_02815 0.31 +0.2 2,947,166 + ECD_02815 0.35 -0.7 2,947,178 - ECD_02815 0.36 -0.6 2,947,199 - ECD_02815 0.38 -2.4 2,947,258 + ECD_02815 0.43 -2.1 2,947,466 - ECD_02815 0.61 -1.5 2,947,520 + ECD_02815 0.66 -2.1 2,947,521 - ECD_02815 0.66 -1.6 2,947,521 - ECD_02815 0.66 -2.6 2,947,521 - ECD_02815 0.66 -1.5 2,947,559 - ECD_02815 0.70 -0.5 2,947,633 - ECD_02815 0.76 -1.1 2,947,639 + ECD_02815 0.77 -1.6 2,947,674 + ECD_02815 0.80 -3.0 2,947,731 + ECD_02815 0.85 -1.7 2,948,092 - -0.5 2,948,198 - ECD_02816 0.16 -1.2 2,948,198 - ECD_02816 0.16 -1.0 2,948,199 + ECD_02816 0.16 -2.8 2,948,399 - ECD_02816 0.28 -2.2 2,948,399 - ECD_02816 0.28 -2.4 2,948,399 - ECD_02816 0.28 -3.6 2,948,408 + ECD_02816 0.29 -1.8 2,948,435 - ECD_02816 0.30 -1.1 2,948,500 + ECD_02816 0.34 -1.5 2,948,501 - ECD_02816 0.34 -2.0 2,948,542 + ECD_02816 0.37 -2.0 2,948,542 + ECD_02816 0.37 -1.4 2,948,596 + ECD_02816 0.40 +0.6 2,948,677 - ECD_02816 0.45 +2.0 2,948,710 + ECD_02816 0.47 -1.2 2,948,793 + ECD_02816 0.52 -1.1 2,948,833 + ECD_02816 0.54 -1.8 2,948,834 - ECD_02816 0.54 -0.7 2,948,862 + ECD_02816 0.56 -4.2 2,948,863 - ECD_02816 0.56 -1.2 2,948,885 + ECD_02816 0.57 -1.2
Or see this region's nucleotide sequence