Experiment: Tailocin 256
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02797 and ECD_02798 are separated by 79 nucleotides ECD_02798 and ECD_02811 are separated by 464 nucleotides
ECD_02797: ECD_02797 - integrase, at 2,941,476 to 2,942,360
_02797
ECD_02798: ECD_02798 - hypothetical protein, at 2,942,440 to 2,943,342
_02798
ECD_02811: ECD_02811 - hypothetical protein, at 2,943,807 to 2,944,376
_02811
Position (kb)
2942
2943
2944 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2941.453 kb on - strand at 2941.490 kb on - strand at 2941.490 kb on - strand at 2941.500 kb on - strand at 2941.530 kb on - strand at 2941.566 kb on + strand, within ECD_02797 at 2941.700 kb on + strand, within ECD_02797 at 2941.700 kb on + strand, within ECD_02797 at 2941.701 kb on - strand, within ECD_02797 at 2941.912 kb on + strand, within ECD_02797 at 2941.913 kb on - strand, within ECD_02797 at 2941.920 kb on + strand, within ECD_02797 at 2941.927 kb on + strand, within ECD_02797 at 2941.928 kb on - strand, within ECD_02797 at 2941.947 kb on + strand, within ECD_02797 at 2941.948 kb on - strand, within ECD_02797 at 2941.948 kb on - strand, within ECD_02797 at 2941.948 kb on - strand, within ECD_02797 at 2942.055 kb on + strand, within ECD_02797 at 2942.056 kb on - strand, within ECD_02797 at 2942.056 kb on - strand, within ECD_02797 at 2942.058 kb on - strand, within ECD_02797 at 2942.058 kb on - strand, within ECD_02797 at 2942.058 kb on - strand, within ECD_02797 at 2942.088 kb on - strand, within ECD_02797 at 2942.174 kb on + strand, within ECD_02797 at 2942.349 kb on - strand at 2942.523 kb on + strand at 2942.550 kb on + strand, within ECD_02798 at 2942.550 kb on + strand, within ECD_02798 at 2942.557 kb on + strand, within ECD_02798 at 2942.557 kb on + strand, within ECD_02798 at 2942.557 kb on + strand, within ECD_02798 at 2942.558 kb on - strand, within ECD_02798 at 2942.705 kb on + strand, within ECD_02798 at 2943.201 kb on + strand, within ECD_02798 at 2943.318 kb on + strand at 2943.352 kb on + strand at 2943.352 kb on + strand at 2943.352 kb on + strand at 2943.352 kb on + strand at 2943.353 kb on - strand at 2943.354 kb on + strand at 2943.354 kb on + strand at 2943.354 kb on + strand at 2943.420 kb on + strand at 2943.421 kb on - strand at 2943.426 kb on + strand at 2943.426 kb on + strand at 2943.427 kb on - strand at 2943.427 kb on - strand at 2943.546 kb on - strand at 2943.593 kb on + strand at 2943.807 kb on - strand at 2943.807 kb on - strand at 2943.807 kb on - strand at 2943.861 kb on - strand at 2943.898 kb on - strand, within ECD_02811 at 2944.219 kb on + strand, within ECD_02811 at 2944.219 kb on + strand, within ECD_02811 at 2944.219 kb on + strand, within ECD_02811 at 2944.220 kb on - strand, within ECD_02811 at 2944.220 kb on - strand, within ECD_02811 at 2944.220 kb on - strand, within ECD_02811 at 2944.220 kb on - strand, within ECD_02811 at 2944.268 kb on + strand, within ECD_02811 at 2944.272 kb on + strand, within ECD_02811 at 2944.272 kb on + strand, within ECD_02811 at 2944.273 kb on - strand, within ECD_02811 at 2944.331 kb on + strand at 2944.339 kb on + strand at 2944.340 kb on - strand at 2944.340 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 256 remove 2,941,453 - -0.5 2,941,490 - -1.1 2,941,490 - -3.2 2,941,500 - -2.7 2,941,530 - -2.2 2,941,566 + ECD_02797 0.10 -2.8 2,941,700 + ECD_02797 0.25 -1.6 2,941,700 + ECD_02797 0.25 +1.4 2,941,701 - ECD_02797 0.25 -0.7 2,941,912 + ECD_02797 0.49 -1.7 2,941,913 - ECD_02797 0.49 -1.3 2,941,920 + ECD_02797 0.50 -3.5 2,941,927 + ECD_02797 0.51 -0.4 2,941,928 - ECD_02797 0.51 -2.4 2,941,947 + ECD_02797 0.53 -1.9 2,941,948 - ECD_02797 0.53 -2.6 2,941,948 - ECD_02797 0.53 -1.4 2,941,948 - ECD_02797 0.53 -1.8 2,942,055 + ECD_02797 0.65 -1.7 2,942,056 - ECD_02797 0.66 -2.1 2,942,056 - ECD_02797 0.66 -0.4 2,942,058 - ECD_02797 0.66 -1.5 2,942,058 - ECD_02797 0.66 -1.6 2,942,058 - ECD_02797 0.66 -0.5 2,942,088 - ECD_02797 0.69 -3.0 2,942,174 + ECD_02797 0.79 -3.1 2,942,349 - -1.4 2,942,523 + -0.5 2,942,550 + ECD_02798 0.12 -0.5 2,942,550 + ECD_02798 0.12 -1.9 2,942,557 + ECD_02798 0.13 -2.3 2,942,557 + ECD_02798 0.13 -1.2 2,942,557 + ECD_02798 0.13 -1.8 2,942,558 - ECD_02798 0.13 -1.9 2,942,705 + ECD_02798 0.29 -1.6 2,943,201 + ECD_02798 0.84 -1.6 2,943,318 + -1.3 2,943,352 + -1.5 2,943,352 + -0.9 2,943,352 + -2.0 2,943,352 + -1.5 2,943,353 - -1.4 2,943,354 + -0.3 2,943,354 + -3.7 2,943,354 + -1.5 2,943,420 + +0.1 2,943,421 - -1.9 2,943,426 + -1.4 2,943,426 + -1.7 2,943,427 - -3.1 2,943,427 - -3.6 2,943,546 - -1.8 2,943,593 + -1.2 2,943,807 - -1.9 2,943,807 - -1.0 2,943,807 - -2.4 2,943,861 - -2.6 2,943,898 - ECD_02811 0.16 -2.1 2,944,219 + ECD_02811 0.72 -1.9 2,944,219 + ECD_02811 0.72 -0.5 2,944,219 + ECD_02811 0.72 -0.7 2,944,220 - ECD_02811 0.72 -1.0 2,944,220 - ECD_02811 0.72 -2.0 2,944,220 - ECD_02811 0.72 -3.0 2,944,220 - ECD_02811 0.72 -2.1 2,944,268 + ECD_02811 0.81 -2.5 2,944,272 + ECD_02811 0.82 +1.5 2,944,272 + ECD_02811 0.82 -4.0 2,944,273 - ECD_02811 0.82 -0.2 2,944,331 + -3.1 2,944,339 + -0.4 2,944,340 - -1.1 2,944,340 - -3.4
Or see this region's nucleotide sequence