Strain Fitness in Escherichia coli BL21 around ECD_02798

Experiment: Tailocin 256

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02797 and ECD_02798 are separated by 79 nucleotidesECD_02798 and ECD_02811 are separated by 464 nucleotides ECD_02797: ECD_02797 - integrase, at 2,941,476 to 2,942,360 _02797 ECD_02798: ECD_02798 - hypothetical protein, at 2,942,440 to 2,943,342 _02798 ECD_02811: ECD_02811 - hypothetical protein, at 2,943,807 to 2,944,376 _02811 Position (kb) 2942 2943 2944Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 2941.453 kb on - strandat 2941.490 kb on - strandat 2941.490 kb on - strandat 2941.500 kb on - strandat 2941.530 kb on - strandat 2941.566 kb on + strand, within ECD_02797at 2941.700 kb on + strand, within ECD_02797at 2941.700 kb on + strand, within ECD_02797at 2941.701 kb on - strand, within ECD_02797at 2941.912 kb on + strand, within ECD_02797at 2941.913 kb on - strand, within ECD_02797at 2941.920 kb on + strand, within ECD_02797at 2941.927 kb on + strand, within ECD_02797at 2941.928 kb on - strand, within ECD_02797at 2941.947 kb on + strand, within ECD_02797at 2941.948 kb on - strand, within ECD_02797at 2941.948 kb on - strand, within ECD_02797at 2941.948 kb on - strand, within ECD_02797at 2942.055 kb on + strand, within ECD_02797at 2942.056 kb on - strand, within ECD_02797at 2942.056 kb on - strand, within ECD_02797at 2942.058 kb on - strand, within ECD_02797at 2942.058 kb on - strand, within ECD_02797at 2942.058 kb on - strand, within ECD_02797at 2942.088 kb on - strand, within ECD_02797at 2942.174 kb on + strand, within ECD_02797at 2942.349 kb on - strandat 2942.523 kb on + strandat 2942.550 kb on + strand, within ECD_02798at 2942.550 kb on + strand, within ECD_02798at 2942.557 kb on + strand, within ECD_02798at 2942.557 kb on + strand, within ECD_02798at 2942.557 kb on + strand, within ECD_02798at 2942.558 kb on - strand, within ECD_02798at 2942.705 kb on + strand, within ECD_02798at 2943.201 kb on + strand, within ECD_02798at 2943.318 kb on + strandat 2943.352 kb on + strandat 2943.352 kb on + strandat 2943.352 kb on + strandat 2943.352 kb on + strandat 2943.353 kb on - strandat 2943.354 kb on + strandat 2943.354 kb on + strandat 2943.354 kb on + strandat 2943.420 kb on + strandat 2943.421 kb on - strandat 2943.426 kb on + strandat 2943.426 kb on + strandat 2943.427 kb on - strandat 2943.427 kb on - strandat 2943.546 kb on - strandat 2943.593 kb on + strandat 2943.807 kb on - strandat 2943.807 kb on - strandat 2943.807 kb on - strandat 2943.861 kb on - strandat 2943.898 kb on - strand, within ECD_02811at 2944.219 kb on + strand, within ECD_02811at 2944.219 kb on + strand, within ECD_02811at 2944.219 kb on + strand, within ECD_02811at 2944.220 kb on - strand, within ECD_02811at 2944.220 kb on - strand, within ECD_02811at 2944.220 kb on - strand, within ECD_02811at 2944.220 kb on - strand, within ECD_02811at 2944.268 kb on + strand, within ECD_02811at 2944.272 kb on + strand, within ECD_02811at 2944.272 kb on + strand, within ECD_02811at 2944.273 kb on - strand, within ECD_02811at 2944.331 kb on + strandat 2944.339 kb on + strandat 2944.340 kb on - strandat 2944.340 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Tailocin 256
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2,941,453 - -0.5
2,941,490 - -1.1
2,941,490 - -3.2
2,941,500 - -2.7
2,941,530 - -2.2
2,941,566 + ECD_02797 0.10 -2.8
2,941,700 + ECD_02797 0.25 -1.6
2,941,700 + ECD_02797 0.25 +1.4
2,941,701 - ECD_02797 0.25 -0.7
2,941,912 + ECD_02797 0.49 -1.7
2,941,913 - ECD_02797 0.49 -1.3
2,941,920 + ECD_02797 0.50 -3.5
2,941,927 + ECD_02797 0.51 -0.4
2,941,928 - ECD_02797 0.51 -2.4
2,941,947 + ECD_02797 0.53 -1.9
2,941,948 - ECD_02797 0.53 -2.6
2,941,948 - ECD_02797 0.53 -1.4
2,941,948 - ECD_02797 0.53 -1.8
2,942,055 + ECD_02797 0.65 -1.7
2,942,056 - ECD_02797 0.66 -2.1
2,942,056 - ECD_02797 0.66 -0.4
2,942,058 - ECD_02797 0.66 -1.5
2,942,058 - ECD_02797 0.66 -1.6
2,942,058 - ECD_02797 0.66 -0.5
2,942,088 - ECD_02797 0.69 -3.0
2,942,174 + ECD_02797 0.79 -3.1
2,942,349 - -1.4
2,942,523 + -0.5
2,942,550 + ECD_02798 0.12 -0.5
2,942,550 + ECD_02798 0.12 -1.9
2,942,557 + ECD_02798 0.13 -2.3
2,942,557 + ECD_02798 0.13 -1.2
2,942,557 + ECD_02798 0.13 -1.8
2,942,558 - ECD_02798 0.13 -1.9
2,942,705 + ECD_02798 0.29 -1.6
2,943,201 + ECD_02798 0.84 -1.6
2,943,318 + -1.3
2,943,352 + -1.5
2,943,352 + -0.9
2,943,352 + -2.0
2,943,352 + -1.5
2,943,353 - -1.4
2,943,354 + -0.3
2,943,354 + -3.7
2,943,354 + -1.5
2,943,420 + +0.1
2,943,421 - -1.9
2,943,426 + -1.4
2,943,426 + -1.7
2,943,427 - -3.1
2,943,427 - -3.6
2,943,546 - -1.8
2,943,593 + -1.2
2,943,807 - -1.9
2,943,807 - -1.0
2,943,807 - -2.4
2,943,861 - -2.6
2,943,898 - ECD_02811 0.16 -2.1
2,944,219 + ECD_02811 0.72 -1.9
2,944,219 + ECD_02811 0.72 -0.5
2,944,219 + ECD_02811 0.72 -0.7
2,944,220 - ECD_02811 0.72 -1.0
2,944,220 - ECD_02811 0.72 -2.0
2,944,220 - ECD_02811 0.72 -3.0
2,944,220 - ECD_02811 0.72 -2.1
2,944,268 + ECD_02811 0.81 -2.5
2,944,272 + ECD_02811 0.82 +1.5
2,944,272 + ECD_02811 0.82 -4.0
2,944,273 - ECD_02811 0.82 -0.2
2,944,331 + -3.1
2,944,339 + -0.4
2,944,340 - -1.1
2,944,340 - -3.4

Or see this region's nucleotide sequence