Strain Fitness in Escherichia coli BL21 around ECD_02768

Experiment: Tailocin 256

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02767 and ECD_02768 are separated by 137 nucleotidesECD_02768 and ECD_02769 are separated by 8 nucleotidesECD_02769 and ECD_02770 are separated by 135 nucleotidesECD_02770 and ECD_02771 overlap by 4 nucleotidesECD_02771 and ECD_02772 are separated by 55 nucleotides ECD_02767: ECD_02767 - agmatinase, at 2,913,735 to 2,914,655 _02767 ECD_02768: ECD_02768 - biosynthetic arginine decarboxylase, PLP-binding, at 2,914,793 to 2,916,769 _02768 ECD_02769: ECD_02769 - uncharacterized protein, at 2,916,778 to 2,916,909 _02769 ECD_02770: ECD_02770 - uncharacterized protein, at 2,917,045 to 2,917,260 _02770 ECD_02771: ECD_02771 - putative inner membrane protein, at 2,917,257 to 2,917,508 _02771 ECD_02772: ECD_02772 - S-adenosylmethionine synthetase, at 2,917,564 to 2,918,718 _02772 Position (kb) 2914 2915 2916 2917Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3 4 5at 2913.888 kb on - strand, within ECD_02767at 2913.888 kb on - strand, within ECD_02767at 2913.891 kb on - strand, within ECD_02767at 2913.989 kb on + strand, within ECD_02767at 2914.083 kb on - strand, within ECD_02767at 2914.100 kb on + strand, within ECD_02767at 2914.100 kb on + strand, within ECD_02767at 2914.101 kb on - strand, within ECD_02767at 2914.101 kb on - strand, within ECD_02767at 2914.154 kb on - strand, within ECD_02767at 2914.160 kb on + strand, within ECD_02767at 2914.161 kb on - strand, within ECD_02767at 2914.193 kb on - strand, within ECD_02767at 2914.193 kb on - strand, within ECD_02767at 2914.196 kb on + strand, within ECD_02767at 2914.218 kb on + strand, within ECD_02767at 2914.219 kb on - strand, within ECD_02767at 2914.271 kb on + strand, within ECD_02767at 2914.301 kb on + strand, within ECD_02767at 2914.301 kb on + strand, within ECD_02767at 2914.301 kb on + strand, within ECD_02767at 2914.301 kb on + strand, within ECD_02767at 2914.302 kb on - strand, within ECD_02767at 2914.302 kb on - strand, within ECD_02767at 2914.302 kb on - strand, within ECD_02767at 2914.302 kb on - strand, within ECD_02767at 2914.381 kb on - strand, within ECD_02767at 2914.381 kb on - strand, within ECD_02767at 2914.381 kb on - strand, within ECD_02767at 2914.381 kb on - strand, within ECD_02767at 2914.381 kb on - strand, within ECD_02767at 2914.571 kb on - strandat 2914.628 kb on + strandat 2914.645 kb on - strandat 2914.645 kb on - strandat 2914.668 kb on - strandat 2914.668 kb on - strandat 2914.671 kb on - strandat 2914.671 kb on - strandat 2914.681 kb on + strandat 2914.684 kb on - strandat 2914.740 kb on - strandat 2914.754 kb on + strandat 2914.769 kb on - strandat 2914.794 kb on + strandat 2914.794 kb on + strandat 2914.795 kb on - strandat 2914.795 kb on - strandat 2914.795 kb on - strandat 2914.795 kb on - strandat 2914.795 kb on - strandat 2914.795 kb on - strandat 2914.809 kb on + strandat 2914.810 kb on - strandat 2914.810 kb on - strandat 2914.813 kb on + strandat 2914.814 kb on - strandat 2914.814 kb on - strandat 2914.814 kb on - strandat 2914.814 kb on - strandat 2914.814 kb on - strandat 2914.814 kb on - strandat 2914.814 kb on - strandat 2914.814 kb on - strandat 2914.816 kb on - strandat 2914.821 kb on + strandat 2914.932 kb on - strandat 2914.932 kb on - strandat 2914.932 kb on - strandat 2914.932 kb on - strandat 2914.932 kb on - strandat 2914.932 kb on - strandat 2914.932 kb on - strandat 2914.935 kb on + strandat 2914.935 kb on + strandat 2914.936 kb on - strandat 2914.936 kb on - strandat 2914.936 kb on - strandat 2914.936 kb on - strandat 2914.936 kb on - strandat 2914.936 kb on - strandat 2914.936 kb on - strandat 2914.936 kb on - strandat 2914.936 kb on - strandat 2914.936 kb on - strandat 2914.936 kb on - strandat 2914.936 kb on - strandat 2914.936 kb on - strandat 2914.979 kb on + strandat 2914.980 kb on - strandat 2914.980 kb on - strandat 2914.986 kb on - strandat 2914.986 kb on - strandat 2914.986 kb on - strandat 2914.986 kb on - strandat 2914.986 kb on - strandat 2914.991 kb on - strand, within ECD_02768at 2915.081 kb on - strand, within ECD_02768at 2915.159 kb on - strand, within ECD_02768at 2915.159 kb on - strand, within ECD_02768at 2915.159 kb on - strand, within ECD_02768at 2915.159 kb on - strand, within ECD_02768at 2915.159 kb on - strand, within ECD_02768at 2915.159 kb on - strand, within ECD_02768at 2915.159 kb on - strand, within ECD_02768at 2915.161 kb on - strand, within ECD_02768at 2915.161 kb on - strand, within ECD_02768at 2915.161 kb on - strand, within ECD_02768at 2915.161 kb on - strand, within ECD_02768at 2915.161 kb on - strand, within ECD_02768at 2915.192 kb on - strand, within ECD_02768at 2915.192 kb on - strand, within ECD_02768at 2915.192 kb on - strand, within ECD_02768at 2915.192 kb on - strand, within ECD_02768at 2915.314 kb on - strand, within ECD_02768at 2915.329 kb on + strand, within ECD_02768at 2915.330 kb on - strand, within ECD_02768at 2915.330 kb on - strand, within ECD_02768at 2915.330 kb on - strand, within ECD_02768at 2915.330 kb on - strand, within ECD_02768at 2915.416 kb on - strand, within ECD_02768at 2915.450 kb on - strand, within ECD_02768at 2915.619 kb on + strand, within ECD_02768at 2915.620 kb on - strand, within ECD_02768at 2915.620 kb on - strand, within ECD_02768at 2915.645 kb on - strand, within ECD_02768at 2915.645 kb on - strand, within ECD_02768at 2915.645 kb on - strand, within ECD_02768at 2915.648 kb on - strand, within ECD_02768at 2915.648 kb on - strand, within ECD_02768at 2915.752 kb on + strand, within ECD_02768at 2915.753 kb on - strand, within ECD_02768at 2915.753 kb on - strand, within ECD_02768at 2915.753 kb on - strand, within ECD_02768at 2915.753 kb on - strand, within ECD_02768at 2915.753 kb on - strand, within ECD_02768at 2915.753 kb on - strand, within ECD_02768at 2915.767 kb on - strand, within ECD_02768at 2915.781 kb on + strand, within ECD_02768at 2915.782 kb on - strand, within ECD_02768at 2915.782 kb on - strand, within ECD_02768at 2915.782 kb on - strand, within ECD_02768at 2915.813 kb on - strand, within ECD_02768at 2915.813 kb on - strand, within ECD_02768at 2915.813 kb on - strand, within ECD_02768at 2915.821 kb on - strand, within ECD_02768at 2915.821 kb on - strand, within ECD_02768at 2915.821 kb on - strand, within ECD_02768at 2915.821 kb on - strand, within ECD_02768at 2915.889 kb on + strand, within ECD_02768at 2915.890 kb on - strand, within ECD_02768at 2915.890 kb on - strand, within ECD_02768at 2915.967 kb on - strand, within ECD_02768at 2915.967 kb on - strand, within ECD_02768at 2916.021 kb on - strand, within ECD_02768at 2916.021 kb on - strand, within ECD_02768at 2916.190 kb on - strand, within ECD_02768at 2916.219 kb on - strand, within ECD_02768at 2916.219 kb on - strand, within ECD_02768at 2916.219 kb on - strand, within ECD_02768at 2916.219 kb on - strand, within ECD_02768at 2916.233 kb on - strand, within ECD_02768at 2916.235 kb on - strand, within ECD_02768at 2916.235 kb on - strand, within ECD_02768at 2916.235 kb on - strand, within ECD_02768at 2916.248 kb on - strand, within ECD_02768at 2916.248 kb on - strand, within ECD_02768at 2916.248 kb on - strand, within ECD_02768at 2916.248 kb on - strand, within ECD_02768at 2916.399 kb on + strand, within ECD_02768at 2916.411 kb on + strand, within ECD_02768at 2916.546 kb on - strand, within ECD_02768at 2916.546 kb on - strand, within ECD_02768at 2916.546 kb on - strand, within ECD_02768at 2916.599 kb on - strandat 2916.627 kb on + strandat 2916.627 kb on + strandat 2916.627 kb on + strandat 2916.627 kb on + strandat 2916.628 kb on - strandat 2916.628 kb on - strandat 2916.628 kb on - strandat 2916.628 kb on - strandat 2916.628 kb on - strandat 2916.628 kb on - strandat 2916.628 kb on - strandat 2916.628 kb on - strandat 2916.628 kb on - strandat 2916.628 kb on - strandat 2916.628 kb on - strandat 2916.631 kb on + strandat 2916.632 kb on - strandat 2916.632 kb on - strandat 2916.650 kb on - strandat 2916.654 kb on + strandat 2916.655 kb on - strandat 2916.655 kb on - strandat 2916.655 kb on - strandat 2916.655 kb on - strandat 2916.714 kb on - strandat 2916.714 kb on - strandat 2916.714 kb on - strandat 2916.717 kb on - strandat 2916.717 kb on - strandat 2916.770 kb on - strandat 2916.785 kb on - strandat 2916.793 kb on - strand, within ECD_02769at 2916.793 kb on - strand, within ECD_02769at 2916.799 kb on - strand, within ECD_02769at 2916.937 kb on - strandat 2916.937 kb on - strandat 2916.937 kb on - strandat 2916.980 kb on - strandat 2916.980 kb on - strandat 2917.013 kb on + strandat 2917.014 kb on - strandat 2917.050 kb on + strandat 2917.050 kb on + strandat 2917.051 kb on - strandat 2917.051 kb on - strandat 2917.051 kb on - strandat 2917.065 kb on + strandat 2917.147 kb on + strand, within ECD_02770at 2917.148 kb on - strand, within ECD_02770at 2917.148 kb on - strand, within ECD_02770at 2917.148 kb on - strand, within ECD_02770at 2917.155 kb on - strand, within ECD_02770at 2917.155 kb on - strand, within ECD_02770at 2917.177 kb on - strand, within ECD_02770at 2917.278 kb on - strandat 2917.278 kb on - strandat 2917.278 kb on - strandat 2917.278 kb on - strandat 2917.278 kb on - strandat 2917.280 kb on - strandat 2917.309 kb on + strand, within ECD_02771at 2917.310 kb on - strand, within ECD_02771at 2917.395 kb on + strand, within ECD_02771at 2917.395 kb on + strand, within ECD_02771at 2917.451 kb on + strand, within ECD_02771at 2917.493 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Tailocin 256
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2,913,888 - ECD_02767 0.17 +4.3
2,913,888 - ECD_02767 0.17 +2.1
2,913,891 - ECD_02767 0.17 +3.7
2,913,989 + ECD_02767 0.28 -0.6
2,914,083 - ECD_02767 0.38 +1.1
2,914,100 + ECD_02767 0.40 -0.7
2,914,100 + ECD_02767 0.40 -1.4
2,914,101 - ECD_02767 0.40 -1.6
2,914,101 - ECD_02767 0.40 -0.7
2,914,154 - ECD_02767 0.45 +1.0
2,914,160 + ECD_02767 0.46 +2.9
2,914,161 - ECD_02767 0.46 +0.8
2,914,193 - ECD_02767 0.50 -1.2
2,914,193 - ECD_02767 0.50 +3.0
2,914,196 + ECD_02767 0.50 +2.2
2,914,218 + ECD_02767 0.52 +2.2
2,914,219 - ECD_02767 0.53 +3.5
2,914,271 + ECD_02767 0.58 -1.2
2,914,301 + ECD_02767 0.61 -0.9
2,914,301 + ECD_02767 0.61 -0.4
2,914,301 + ECD_02767 0.61 +0.0
2,914,301 + ECD_02767 0.61 +1.2
2,914,302 - ECD_02767 0.62 +0.4
2,914,302 - ECD_02767 0.62 +0.5
2,914,302 - ECD_02767 0.62 +1.4
2,914,302 - ECD_02767 0.62 +0.1
2,914,381 - ECD_02767 0.70 +3.9
2,914,381 - ECD_02767 0.70 -0.3
2,914,381 - ECD_02767 0.70 -0.6
2,914,381 - ECD_02767 0.70 +3.7
2,914,381 - ECD_02767 0.70 +1.4
2,914,571 - +5.2
2,914,628 + -0.6
2,914,645 - -0.3
2,914,645 - -0.4
2,914,668 - -0.7
2,914,668 - -3.1
2,914,671 - -0.7
2,914,671 - +3.9
2,914,681 + -0.8
2,914,684 - +0.8
2,914,740 - -1.9
2,914,754 + +3.3
2,914,769 - -3.3
2,914,794 + -1.9
2,914,794 + +0.3
2,914,795 - -1.6
2,914,795 - -1.7
2,914,795 - -2.9
2,914,795 - -1.7
2,914,795 - -1.0
2,914,795 - +0.9
2,914,809 + -2.4
2,914,810 - -1.2
2,914,810 - -2.2
2,914,813 + -1.0
2,914,814 - -2.6
2,914,814 - -2.9
2,914,814 - -4.0
2,914,814 - -4.1
2,914,814 - -2.6
2,914,814 - -3.2
2,914,814 - -5.4
2,914,814 - -1.1
2,914,816 - -3.6
2,914,821 + -3.7
2,914,932 - -1.9
2,914,932 - -3.7
2,914,932 - -4.1
2,914,932 - -2.9
2,914,932 - -2.8
2,914,932 - +1.8
2,914,932 - -1.7
2,914,935 + -2.6
2,914,935 + -2.5
2,914,936 - +2.9
2,914,936 - -2.4
2,914,936 - -4.3
2,914,936 - -1.3
2,914,936 - +3.6
2,914,936 - -2.6
2,914,936 - -5.0
2,914,936 - -0.8
2,914,936 - -3.1
2,914,936 - -4.0
2,914,936 - -2.5
2,914,936 - -3.8
2,914,936 - -4.9
2,914,979 + -1.6
2,914,980 - -4.5
2,914,980 - -2.2
2,914,986 - -3.6
2,914,986 - +0.2
2,914,986 - -0.9
2,914,986 - +2.8
2,914,986 - -2.8
2,914,991 - ECD_02768 0.10 -5.5
2,915,081 - ECD_02768 0.15 -0.1
2,915,159 - ECD_02768 0.19 -2.8
2,915,159 - ECD_02768 0.19 -2.5
2,915,159 - ECD_02768 0.19 -2.3
2,915,159 - ECD_02768 0.19 -2.7
2,915,159 - ECD_02768 0.19 -1.2
2,915,159 - ECD_02768 0.19 +0.1
2,915,159 - ECD_02768 0.19 -3.4
2,915,161 - ECD_02768 0.19 -3.9
2,915,161 - ECD_02768 0.19 -0.4
2,915,161 - ECD_02768 0.19 -2.7
2,915,161 - ECD_02768 0.19 -2.9
2,915,161 - ECD_02768 0.19 -2.0
2,915,192 - ECD_02768 0.20 -4.4
2,915,192 - ECD_02768 0.20 -2.9
2,915,192 - ECD_02768 0.20 -1.9
2,915,192 - ECD_02768 0.20 +3.2
2,915,314 - ECD_02768 0.26 +2.5
2,915,329 + ECD_02768 0.27 +0.3
2,915,330 - ECD_02768 0.27 +2.1
2,915,330 - ECD_02768 0.27 -4.5
2,915,330 - ECD_02768 0.27 -1.9
2,915,330 - ECD_02768 0.27 -3.8
2,915,416 - ECD_02768 0.32 +1.6
2,915,450 - ECD_02768 0.33 -4.2
2,915,619 + ECD_02768 0.42 -2.0
2,915,620 - ECD_02768 0.42 -1.6
2,915,620 - ECD_02768 0.42 +2.4
2,915,645 - ECD_02768 0.43 -2.5
2,915,645 - ECD_02768 0.43 -4.1
2,915,645 - ECD_02768 0.43 -3.3
2,915,648 - ECD_02768 0.43 -1.9
2,915,648 - ECD_02768 0.43 -3.3
2,915,752 + ECD_02768 0.49 -1.7
2,915,753 - ECD_02768 0.49 -2.4
2,915,753 - ECD_02768 0.49 -2.4
2,915,753 - ECD_02768 0.49 -2.5
2,915,753 - ECD_02768 0.49 -1.3
2,915,753 - ECD_02768 0.49 -0.3
2,915,753 - ECD_02768 0.49 -1.4
2,915,767 - ECD_02768 0.49 +1.0
2,915,781 + ECD_02768 0.50 -3.2
2,915,782 - ECD_02768 0.50 -4.4
2,915,782 - ECD_02768 0.50 -1.2
2,915,782 - ECD_02768 0.50 -3.2
2,915,813 - ECD_02768 0.52 +0.4
2,915,813 - ECD_02768 0.52 -3.1
2,915,813 - ECD_02768 0.52 -1.4
2,915,821 - ECD_02768 0.52 +0.9
2,915,821 - ECD_02768 0.52 -3.4
2,915,821 - ECD_02768 0.52 -0.5
2,915,821 - ECD_02768 0.52 -4.0
2,915,889 + ECD_02768 0.55 -2.1
2,915,890 - ECD_02768 0.55 -3.7
2,915,890 - ECD_02768 0.55 -1.6
2,915,967 - ECD_02768 0.59 -2.8
2,915,967 - ECD_02768 0.59 -3.0
2,916,021 - ECD_02768 0.62 -3.0
2,916,021 - ECD_02768 0.62 -3.4
2,916,190 - ECD_02768 0.71 -2.8
2,916,219 - ECD_02768 0.72 -0.7
2,916,219 - ECD_02768 0.72 -1.1
2,916,219 - ECD_02768 0.72 -3.2
2,916,219 - ECD_02768 0.72 -1.4
2,916,233 - ECD_02768 0.73 +1.5
2,916,235 - ECD_02768 0.73 -3.5
2,916,235 - ECD_02768 0.73 -4.0
2,916,235 - ECD_02768 0.73 -2.5
2,916,248 - ECD_02768 0.74 -2.6
2,916,248 - ECD_02768 0.74 -2.6
2,916,248 - ECD_02768 0.74 -2.4
2,916,248 - ECD_02768 0.74 -2.6
2,916,399 + ECD_02768 0.81 -2.7
2,916,411 + ECD_02768 0.82 -0.8
2,916,546 - ECD_02768 0.89 -3.8
2,916,546 - ECD_02768 0.89 -2.7
2,916,546 - ECD_02768 0.89 +2.0
2,916,599 - +1.6
2,916,627 + -2.8
2,916,627 + -2.1
2,916,627 + -1.5
2,916,627 + -1.5
2,916,628 - -0.1
2,916,628 - -3.4
2,916,628 - -2.8
2,916,628 - -3.2
2,916,628 - +0.4
2,916,628 - -3.4
2,916,628 - -3.7
2,916,628 - -2.5
2,916,628 - -1.9
2,916,628 - -2.7
2,916,628 - -3.9
2,916,631 + -2.3
2,916,632 - -4.1
2,916,632 - -3.4
2,916,650 - -3.6
2,916,654 + -1.3
2,916,655 - -3.7
2,916,655 - -0.4
2,916,655 - -0.4
2,916,655 - -4.0
2,916,714 - -2.5
2,916,714 - +2.2
2,916,714 - -1.9
2,916,717 - -3.1
2,916,717 - -4.0
2,916,770 - -3.6
2,916,785 - -4.8
2,916,793 - ECD_02769 0.11 -1.7
2,916,793 - ECD_02769 0.11 -0.3
2,916,799 - ECD_02769 0.16 -3.1
2,916,937 - -3.2
2,916,937 - +1.0
2,916,937 - -3.1
2,916,980 - -0.9
2,916,980 - +0.2
2,917,013 + -3.5
2,917,014 - -0.7
2,917,050 + +1.2
2,917,050 + -2.1
2,917,051 - +0.7
2,917,051 - -4.0
2,917,051 - -1.1
2,917,065 + -3.3
2,917,147 + ECD_02770 0.47 -2.7
2,917,148 - ECD_02770 0.48 -1.7
2,917,148 - ECD_02770 0.48 -2.4
2,917,148 - ECD_02770 0.48 -0.2
2,917,155 - ECD_02770 0.51 -1.2
2,917,155 - ECD_02770 0.51 -1.6
2,917,177 - ECD_02770 0.61 -1.3
2,917,278 - -2.9
2,917,278 - -0.4
2,917,278 - -1.4
2,917,278 - -0.2
2,917,278 - -2.1
2,917,280 - -4.6
2,917,309 + ECD_02771 0.21 -0.8
2,917,310 - ECD_02771 0.21 -2.2
2,917,395 + ECD_02771 0.55 +0.1
2,917,395 + ECD_02771 0.55 +1.6
2,917,451 + ECD_02771 0.77 -2.3
2,917,493 + +2.5

Or see this region's nucleotide sequence