Experiment: Tailocin 256
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02103 and ECD_02104 are separated by 38 nucleotides ECD_02104 and ECD_02105 are separated by 411 nucleotides
ECD_02103: ECD_02103 - Zn-stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein, at 2,162,678 to 2,163,664
_02103
ECD_02104: ECD_02104 - lipid A 1-diphosphate synthase; undecaprenyl pyrophosphate:lipid A 1-phosphate phosphotransferase, at 2,163,703 to 2,164,416
_02104
ECD_02105: ECD_02105 - murein DD-endopeptidase, space-maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein, weak murein LD-carboxypeptidase, at 2,164,828 to 2,165,394
_02105
Position (kb)
2163
2164
2165 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5
6 at 2162.908 kb on + strand, within ECD_02103 at 2163.211 kb on - strand, within ECD_02103 at 2163.336 kb on + strand, within ECD_02103 at 2163.690 kb on - strand at 2163.725 kb on + strand at 2163.769 kb on + strand at 2163.972 kb on + strand, within ECD_02104 at 2163.981 kb on + strand, within ECD_02104 at 2164.001 kb on + strand, within ECD_02104 at 2164.346 kb on + strand at 2164.414 kb on + strand at 2164.693 kb on + strand at 2164.695 kb on + strand at 2164.791 kb on + strand at 2164.855 kb on + strand at 2164.855 kb on + strand at 2164.855 kb on + strand at 2164.857 kb on + strand at 2164.908 kb on + strand, within ECD_02105 at 2164.908 kb on + strand, within ECD_02105 at 2164.917 kb on + strand, within ECD_02105 at 2164.932 kb on + strand, within ECD_02105 at 2164.932 kb on + strand, within ECD_02105 at 2165.037 kb on + strand, within ECD_02105 at 2165.037 kb on + strand, within ECD_02105 at 2165.037 kb on + strand, within ECD_02105 at 2165.047 kb on + strand, within ECD_02105 at 2165.047 kb on + strand, within ECD_02105 at 2165.047 kb on + strand, within ECD_02105 at 2165.066 kb on + strand, within ECD_02105 at 2165.066 kb on + strand, within ECD_02105 at 2165.091 kb on + strand, within ECD_02105 at 2165.091 kb on + strand, within ECD_02105 at 2165.127 kb on + strand, within ECD_02105 at 2165.127 kb on + strand, within ECD_02105 at 2165.150 kb on + strand, within ECD_02105 at 2165.170 kb on + strand, within ECD_02105 at 2165.190 kb on + strand, within ECD_02105 at 2165.208 kb on + strand, within ECD_02105 at 2165.228 kb on + strand, within ECD_02105 at 2165.228 kb on + strand, within ECD_02105 at 2165.268 kb on + strand, within ECD_02105 at 2165.272 kb on + strand, within ECD_02105 at 2165.272 kb on + strand, within ECD_02105 at 2165.272 kb on + strand, within ECD_02105
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 256 remove 2,162,908 + ECD_02103 0.23 +0.2 2,163,211 - ECD_02103 0.54 -0.4 2,163,336 + ECD_02103 0.67 -2.5 2,163,690 - +5.8 2,163,725 + +5.5 2,163,769 + +5.6 2,163,972 + ECD_02104 0.38 +5.4 2,163,981 + ECD_02104 0.39 +5.0 2,164,001 + ECD_02104 0.42 +5.2 2,164,346 + -0.6 2,164,414 + +3.2 2,164,693 + +0.1 2,164,695 + +0.5 2,164,791 + -0.8 2,164,855 + +1.9 2,164,855 + -1.8 2,164,855 + -2.4 2,164,857 + +0.4 2,164,908 + ECD_02105 0.14 +1.8 2,164,908 + ECD_02105 0.14 +0.1 2,164,917 + ECD_02105 0.16 +2.5 2,164,932 + ECD_02105 0.18 +0.7 2,164,932 + ECD_02105 0.18 +0.8 2,165,037 + ECD_02105 0.37 +0.5 2,165,037 + ECD_02105 0.37 +0.3 2,165,037 + ECD_02105 0.37 -0.6 2,165,047 + ECD_02105 0.39 -0.5 2,165,047 + ECD_02105 0.39 +1.7 2,165,047 + ECD_02105 0.39 -0.3 2,165,066 + ECD_02105 0.42 +1.3 2,165,066 + ECD_02105 0.42 +0.3 2,165,091 + ECD_02105 0.46 +0.2 2,165,091 + ECD_02105 0.46 +0.1 2,165,127 + ECD_02105 0.53 +0.6 2,165,127 + ECD_02105 0.53 +0.1 2,165,150 + ECD_02105 0.57 +0.3 2,165,170 + ECD_02105 0.60 -0.4 2,165,190 + ECD_02105 0.64 +0.1 2,165,208 + ECD_02105 0.67 +0.6 2,165,228 + ECD_02105 0.71 -0.6 2,165,228 + ECD_02105 0.71 +0.7 2,165,268 + ECD_02105 0.78 -0.4 2,165,272 + ECD_02105 0.78 -0.1 2,165,272 + ECD_02105 0.78 +0.3 2,165,272 + ECD_02105 0.78 -0.3
Or see this region's nucleotide sequence