Experiment: Tailocin 256
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_04288 and ECD_04281 overlap by 82 nucleotides ECD_04281 and ECD_02017 are separated by 353 nucleotides ECD_02017 and ECD_02018 are separated by 47 nucleotides
ECD_04288: ECD_04288 - IS1 protein InsA, at 2,068,587 to 2,068,862
_04288
ECD_04281: ECD_04281 - IS1 protein InsB, at 2,068,781 to 2,069,284
_04281
ECD_02017: ECD_02017 - galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding, at 2,069,638 to 2,070,678
_02017
ECD_02018: ECD_02018 - galactitol-specific enzyme IIC component of PTS, at 2,070,726 to 2,072,081
_02018
Position (kb)
2069
2070
2071 Strain fitness (log2 ratio)
-1
0
1 at 2069.752 kb on - strand, within ECD_02017 at 2069.752 kb on - strand, within ECD_02017 at 2069.811 kb on - strand, within ECD_02017 at 2069.852 kb on - strand, within ECD_02017 at 2070.049 kb on - strand, within ECD_02017 at 2070.184 kb on - strand, within ECD_02017 at 2070.993 kb on - strand, within ECD_02018 at 2071.306 kb on - strand, within ECD_02018 at 2071.526 kb on - strand, within ECD_02018 at 2071.548 kb on - strand, within ECD_02018 at 2071.554 kb on - strand, within ECD_02018 at 2071.608 kb on - strand, within ECD_02018
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 256 remove 2,069,752 - ECD_02017 0.11 +0.7 2,069,752 - ECD_02017 0.11 +0.3 2,069,811 - ECD_02017 0.17 -0.6 2,069,852 - ECD_02017 0.21 -0.1 2,070,049 - ECD_02017 0.39 -0.9 2,070,184 - ECD_02017 0.52 +0.9 2,070,993 - ECD_02018 0.20 -0.3 2,071,306 - ECD_02018 0.43 -0.8 2,071,526 - ECD_02018 0.59 +0.1 2,071,548 - ECD_02018 0.61 +0.6 2,071,554 - ECD_02018 0.61 -1.7 2,071,608 - ECD_02018 0.65 -0.2
Or see this region's nucleotide sequence