Experiment: Tailocin 256
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01691 and ECD_01692 are separated by 286 nucleotides ECD_01692 and ECD_01693 are separated by 100 nucleotides ECD_01693 and ECD_01694 are separated by 105 nucleotides
ECD_01691: ECD_01691 - acid-inducible putative outer membrane protein, at 1,749,738 to 1,750,496
_01691
ECD_01692: ECD_01692 - 6-phosphofructokinase II, at 1,750,783 to 1,751,712
_01692
ECD_01693: ECD_01693 - uncharacterized protein, at 1,751,813 to 1,752,103
_01693
ECD_01694: ECD_01694 - fructosamine kinase family protein, at 1,752,209 to 1,753,069
_01694
Position (kb) 1750
1751
1752 Strain fitness (log2 ratio) -2
-1
0
1 at 1749.868 kb on - strand, within ECD_01691 at 1750.160 kb on - strand, within ECD_01691 at 1750.308 kb on - strand, within ECD_01691 at 1751.066 kb on + strand, within ECD_01692 at 1751.319 kb on + strand, within ECD_01692 at 1751.496 kb on + strand, within ECD_01692 at 1751.838 kb on - strand at 1751.867 kb on - strand, within ECD_01693 at 1751.893 kb on + strand, within ECD_01693 at 1751.926 kb on + strand, within ECD_01693 at 1752.413 kb on - strand, within ECD_01694
Per-strain Table
Position Strand Gene LocusTag Fraction Tailocin 256 remove 1,749,868 - ECD_01691 0.17 -2.3 1,750,160 - ECD_01691 0.56 +1.4 1,750,308 - ECD_01691 0.75 +0.7 1,751,066 + ECD_01692 0.30 +0.8 1,751,319 + ECD_01692 0.58 -0.4 1,751,496 + ECD_01692 0.77 +0.8 1,751,838 - +0.7 1,751,867 - ECD_01693 0.19 +1.5 1,751,893 + ECD_01693 0.27 -0.2 1,751,926 + ECD_01693 0.39 +0.1 1,752,413 - ECD_01694 0.24 -2.5
Or see this region's nucleotide sequence