Strain Fitness in Escherichia coli BL21 around ECD_01358

Experiment: Tailocin 256

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01357 and ECD_01358 are separated by 58 nucleotidesECD_01358 and ECD_01359 are separated by 290 nucleotidesECD_01359 and ECD_01360 overlap by 4 nucleotides ECD_01357: ECD_01357 - phenylacetaldehyde dehydrogenase, at 1,423,078 to 1,424,577 _01357 ECD_01358: ECD_01358 - tyramine oxidase, copper-requiring, at 1,424,636 to 1,426,354 _01358 ECD_01359: ECD_01359 - putative transposase-related protein, at 1,426,645 to 1,426,953 _01359 ECD_01360: ECD_01360 - IS3 element protein InsF, at 1,426,950 to 1,427,816 _01360 Position (kb) 1424 1425 1426 1427Strain fitness (log2 ratio) -1 0 1 2at 1424.227 kb on + strand, within ECD_01357at 1424.228 kb on - strand, within ECD_01357at 1424.553 kb on + strandat 1424.821 kb on - strand, within ECD_01358at 1425.241 kb on + strand, within ECD_01358at 1425.241 kb on + strand, within ECD_01358at 1425.424 kb on - strand, within ECD_01358at 1425.424 kb on - strand, within ECD_01358at 1425.506 kb on - strand, within ECD_01358at 1425.506 kb on - strand, within ECD_01358at 1425.655 kb on + strand, within ECD_01358at 1425.781 kb on - strand, within ECD_01358at 1425.911 kb on - strand, within ECD_01358at 1426.157 kb on - strand, within ECD_01358

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Per-strain Table

Position Strand Gene LocusTag Fraction Tailocin 256
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1,424,227 + ECD_01357 0.77 +0.6
1,424,228 - ECD_01357 0.77 -0.2
1,424,553 + +0.4
1,424,821 - ECD_01358 0.11 -0.6
1,425,241 + ECD_01358 0.35 -0.7
1,425,241 + ECD_01358 0.35 +1.4
1,425,424 - ECD_01358 0.46 +0.5
1,425,424 - ECD_01358 0.46 -0.9
1,425,506 - ECD_01358 0.51 -0.8
1,425,506 - ECD_01358 0.51 +1.7
1,425,655 + ECD_01358 0.59 +0.4
1,425,781 - ECD_01358 0.67 +0.1
1,425,911 - ECD_01358 0.74 +2.0
1,426,157 - ECD_01358 0.88 -1.0

Or see this region's nucleotide sequence